GISTIC2.0 facilitates sensitive and confident localization of the targets of focal somatic copy-number alteration in human cancers

Por Mermel, Craig H, Schumacher, Steven E, Hill, Barbara, Meyerson, Matthew L, Beroukhim, Rameen, Getz, Gad
Publicado em 2011

microRNA Expression during Trophectoderm Specification

Por Viswanathan, Srinivas R., Mermel, Craig H., Lu, Jun, Lu, Chi-Wei, Golub, Todd R., Daley, George Q.
Publicado em 2009

Src family kinases are important negative regulators of G-CSF-dependent granulopoiesis

Por Mermel, Craig H., McLemore, Morgan L., Liu, Fulu, Pereira, Shalini, Woloszynek, Jill, Lowell, Clifford A., Link, Daniel C.
Publicado em 2006

Discovery and saturation analysis of cancer genes across 21 tumor types

Por Lawrence, Michael S., Stojanov, Petar, Mermel, Craig H., Garraway, Levi A., Golub, Todd R., Meyerson, Matthew, Gabriel, Stacey B., Lander, Eric S., Getz, Gad
Publicado em 2014

Recurrent Hemizygous Deletions in Cancers May Optimize Proliferative Potential

Por Solimini, Nicole L., Xu, Qikai, Mermel, Craig H., Liang, Anthony C., Schlabach, Michael R., Luo, Ji, Burrows, Anna E., Anselmo, Anthony N., Bredemeyer, Andrea L., Li, Mamie Z., Beroukhim, Rameen, Meyerson, Matthew, Elledge, Stephen J.
Publicado em 2012

ERG rearrangement is specific to prostate cancer and does not occur in any other common tumor

Por Scheble, Veit J., Braun, Martin, Beroukhim, Rameen, Mermel, Craig H., Ruiz, Christian, Wilbertz, Theresia, Stiedl, Ann-Cathrin, Petersen, Karen, Reischl, Markus, Kuefer, Rainer, Schilling, David, Fend, Falko, Kristiansen, Glen, Meyerson, Matthew, Rubin, Mark A., Bubendorf, Lukas, Perner, Sven
Publicado em 2010

Pan-cancer patterns of somatic copy-number alteration

Por Zack, Travis I., Schumacher, Steven E., Carter, Scott L., Cherniack, Andrew D., Saksena, Gordon, Tabak, Barbara, Lawrence, Michael S., Zhang, Cheng-Zhong, Wala, Jeremiah, Mermel, Craig H., Sougnez, Carrie, Gabriel, Stacey B., Hernandez, Bryan, Shen, Hui, Laird, Peter W., Getz, Gad, Meyerson, Matthew, Beroukhim, Rameen
Publicado em 2013

Integrated genomic analysis illustrates the central role of JAK-STAT pathway activation in myeloproliferative neoplasm pathogenesis

Por Rampal, Raajit, Al-Shahrour, Fatima, Abdel-Wahab, Omar, Patel, Jay P., Brunel, Jean-Philippe, Mermel, Craig H., Bass, Adam J., Pretz, Jennifer, Ahn, Jihae, Hricik, Todd, Kilpivaara, Outi, Wadleigh, Martha, Busque, Lambert, Gilliland, D. Gary, Golub, Todd R., Ebert, Benjamin L., Levine, Ross L.
Publicado em 2014

Systematic interrogation of 3q26 identifies TLOC1 and SKIL as cancer drivers

Por Hagerstrand, Daniel, Tong, Alexander, Schumacher, Steven E., Ilic, Nina, Shen, Rhine R., Cheung, Hiu Wing, Vazquez, Francisca, Shrestha, Yashaswi, Kim, So Young, Giacomelli, Andrew O., Rosenbluh, Joseph, Schinzel, Anna C., Spardy, Nicole A., Barbie, David A., Mermel, Craig H., Weir, Barbara A., Garraway, Levi A., Tamayo, Pablo, Mesirov, Jill P., Beroukhim, Rameen, Hahn, William C.
Publicado em 2013

The SETDB1 histone methyltransferase is recurrently amplified in and accelerates melanoma

Por Ceol, Craig J., Houvras, Yariv, Jane-Valbuena, Judit, Bilodeau, Steve, Orlando, David A., Battisti, Valentine, Fritsch, Lauriane, Lin, William M., Hollmann, Travis J., Ferré, Fabrizio, Bourque, Caitlin, Burke, Christopher J., Turner, Laura, Uong, Audrey, Johnson, Laura A., Beroukhim, Rameen, Mermel, Craig H., Loda, Massimo, Ait-Si-Ali, Slimane, Garraway, Levi A., Young, Richard A., Zon, Leonard I.
Publicado em 2011

Lin28 Enhances Tumorigenesis and is Associated With Advanced Human Malignancies

Por Viswanathan, Srinivas R., Powers, John T., Einhorn, William, Hoshida, Yujin, Ng, Tony, Toffanin, Sara, O'Sullivan, Maureen, Lu, Jun, Philips, Letha A., Lockhart, Victoria L., Shah, Samar P., Tanwar, Pradeep S., Mermel, Craig H., Beroukhim, Rameen, Azam, Mohammad, Teixeira, Jose, Meyerson, Matthew, Hughes, Timothy P., Llovet, Josep M, Radich, Jerald, Mullighan, Charles G., Golub, Todd R., Sorensen, Poul H., Daley, George Q.
Publicado em 2009

The 2013 symposium on pathology data integration and clinical decision support and the current state of field

Por Baron, Jason M., Dighe, Anand S., Arnaout, Ramy, Balis, Ulysses J., Black-Schaffer, W. Stephen, Carter, Alexis B., Henricks, Walter H., Higgins, John M., Jackson, Brian R., Kim, JiYeon, Klepeis, Veronica E., Le, Long P., Louis, David N., Mandelker, Diana, Mermel, Craig H., Michaelson, James S., Nagarajan, Rakesh, Platt, Mihae E., Quinn, Andrew M., Rao, Luigi, Shirts, Brian H., Gilbertson, John R.
Publicado em 2014

Clinical acquired resistance to RAF inhibitor combinations in BRAF-mutant colorectal cancer through MAPK pathway alterations

Por Ahronian, Leanne G., Sennott, Erin M., Van Allen, Eliezer M., Wagle, Nikhil, Kwak, Eunice L., Faris, Jason E., Godfrey, Jason T., Nishimura, Koki, Lynch, Kerry D., Mermel, Craig H., Lockerman, Elizabeth L., Kalsy, Anuj, Gurski, Joseph M., Bahl, Samira, Anderka, Kristin, Green, Lisa M., Lennon, Niall J., Huynh, Tiffany G., Mino-Kenudson, Mari, Getz, Gad, Dias-Santagata, Dora, Iafrate, A. John, Engelman, Jeffrey A., Garraway, Levi A., Corcoran, Ryan B.
Publicado no Cancer Discov (2015)

Systematic investigation of genetic vulnerabilities across cancer cell lines reveals lineage-specific dependencies in ovarian cancer

Por Cheung, Hiu Wing, Cowley, Glenn S., Weir, Barbara A., Boehm, Jesse S., Rusin, Scott, Scott, Justine A., East, Alexandra, Ali, Levi D., Lizotte, Patrick H., Wong, Terence C., Jiang, Guozhi, Hsiao, Jessica, Mermel, Craig H., Getz, Gad, Barretina, Jordi, Gopal, Shuba, Tamayo, Pablo, Gould, Joshua, Tsherniak, Aviad, Stransky, Nicolas, Luo, Biao, Ren, Yin, Drapkin, Ronny, Bhatia, Sangeeta N., Mesirov, Jill P., Garraway, Levi A., Meyerson, Matthew, Lander, Eric S., Root, David E., Hahn, William C.
Publicado em 2011

RB loss in resistant EGFR mutant lung adenocarcinomas that transform to small-cell lung cancer

Por Niederst, Matthew J., Sequist, Lecia V., Poirier, John T., Mermel, Craig H., Lockerman, Elizabeth L., Garcia, Angel R., Katayama, Ryohei, Costa, Carlotta, Ross, Kenneth N., Moran, Teresa, Howe, Emily, Fulton, Linnea E., Mulvey, Hillary E., Bernardo, Lindsay A., Mohamoud, Farhiya, Miyoshi, Norikatsu, VanderLaan, Paul A., Costa, Daniel B., Jänne, Pasi A., Borger, Darrell R., Ramaswamy, Sridhar, Shioda, Toshi, Iafrate, Anthony J., Getz, Gad, Rudin, Charles M., Mino-Kenudson, Mari, Engelman, Jeffrey A.
Publicado no Nat Commun (2015)

Age-Related Clonal Hematopoiesis Associated with Adverse Outcomes

Por Jaiswal, Siddhartha, Fontanillas, Pierre, Flannick, Jason, Manning, Alisa, Grauman, Peter V., Mar, Brenton G., Lindsley, R. Coleman, Mermel, Craig H., Burtt, Noel, Chavez, Alejandro, Higgins, John M., Moltchanov, Vladislav, Kuo, Frank C., Kluk, Michael J., Henderson, Brian, Kinnunen, Leena, Koistinen, Heikki A., Ladenvall, Claes, Getz, Gad, Correa, Adolfo, Banahan, Benjamin F., Gabriel, Stacey, Kathiresan, Sekar, Stringham, Heather M., McCarthy, Mark I., Boehnke, Michael, Tuomilehto, Jaakko, Haiman, Christopher, Groop, Leif, Atzmon, Gil, Wilson, James G., Neuberg, Donna, Altshuler, David, Ebert, Benjamin L.
Publicado no N Engl J Med (2014)

Prognostically relevant gene signatures of high-grade serous ovarian carcinoma

Por Verhaak, Roel G.W., Tamayo, Pablo, Yang, Ji-Yeon, Hubbard, Diana, Zhang, Hailei, Creighton, Chad J., Fereday, Sian, Lawrence, Michael, Carter, Scott L., Mermel, Craig H., Kostic, Aleksandar D., Etemadmoghadam, Dariush, Saksena, Gordon, Cibulskis, Kristian, Duraisamy, Sekhar, Levanon, Keren, Sougnez, Carrie, Tsherniak, Aviad, Gomez, Sebastian, Onofrio, Robert, Gabriel, Stacey, Chin, Lynda, Zhang, Nianxiang, Spellman, Paul T., Zhang, Yiqun, Akbani, Rehan, Hoadley, Katherine A., Kahn, Ari, Köbel, Martin, Huntsman, David, Soslow, Robert A., Defazio, Anna, Birrer, Michael J., Gray, Joe W., Weinstein, John N., Bowtell, David D., Drapkin, Ronny, Mesirov, Jill P., Getz, Gad, Levine, Douglas A., Meyerson, Matthew
Publicado em 2012

SOX2 Is an Amplified Lineage Survival Oncogene in Lung and Esophageal Squamous Cell Carcinomas

Por Bass, Adam J., Watanabe, Hideo, Mermel, Craig H., Yu, Soyoung, Perner, Sven, Verhaak, Roel G., Kim, So Young, Wardwell, Leslie, Tamayo, Pablo, Gat-Viks, Irit, Ramos, Alex H., Woo, Michele S., Weir, Barbara A., Getz, Gad, Beroukhim, Rameen, O’Kelly, Michael, Dutt, Amit, Rozenblatt-Rosen, Orit, Dziunycz, Piotr, Komisarof, Justin, Chirieac, Lucian R., LaFargue, Christopher J., Scheble, Veit, Wilbertz, Theresia, Ma, Changqing, Rao, Shilpa, Nakagawa, Hiroshi, Stairs, Douglas B., Lin, Lin, Giordano, Thomas J., Wagner, Patrick, Minna, John D., Gazdar, Adi F., Zhu, Chang Qi, Brose, Marcia S., Cecconello, Ivan, Ribeiro, Ulysses, Marie, Suely K., Dahl, Olav, Shivdasani, Ramesh A., Tsao, Ming-Sound, Rubin, Mark A., Wong, Kwok K., Regev, Aviv, Hahn, William C., Beer, David G., Rustgi, Anil K., Meyerson, Matthew
Publicado em 2009

The landscape of somatic copy-number alteration across human cancers

Por Beroukhim, Rameen, Mermel, Craig H., Porter, Dale, Wei, Guo, Raychaudhuri, Soumya, Donovan, Jerry, Barretina, Jordi, Boehm, Jesse S., Dobson, Jennifer, Urashima, Mitsuyoshi, Mc Henry, Kevin T., Pinchback, Reid M., Ligon, Azra H., Cho, Yoon-Jae, Haery, Leila, Greulich, Heidi, Reich, Michael, Winckler, Wendy, Lawrence, Michael S., Weir, Barbara A., Tanaka, Kumiko E., Chiang, Derek Y., Bass, Adam J., Loo, Alice, Hoffman, Carter, Prensner, John, Liefeld, Ted, Gao, Qing, Yecies, Derek, Signoretti, Sabina, Maher, Elizabeth, Kaye, Frederic J., Sasaki, Hidefumi, Tepper, Joel E., Fletcher, Jonathan A., Tabernero, Josep, Baselga, Jose, Tsao, Ming-Sound, DeMichelis, Francesca, Rubin, Mark A., Janne, Pasi A., Daly, Mark J., Nucera, Carmelo, Levine, Ross L., Ebert, Benjamin L., Gabriel, Stacey, Rustgi, Anil K., Antonescu, Cristina R., Ladanyi, Marc, Letai, Anthony, Garraway, Levi A., Loda, Massimo, Beer, David G., True, Lawrence D., Okamoto, Aikou, Pomeroy, Scott L., Singer, Samuel, Golub, Todd R., Lander, Eric S., Getz, Gad, Sellers, William R., Meyerson, Matthew
Publicado em 2010

Mutational heterogeneity in cancer and the search for new cancer genes

Por Lawrence, Michael S., Stojanov, Petar, Polak, Paz, Kryukov, Gregory V., Cibulskis, Kristian, Sivachenko, Andrey, Carter, Scott L., Stewart, Chip, Mermel, Craig H., Roberts, Steven A., Kiezun, Adam, Hammerman, Peter S., McKenna, Aaron, Drier, Yotam, Zou, Lihua, Ramos, Alex H., Pugh, Trevor J., Stransky, Nicolas, Helman, Elena, Kim, Jaegil, Sougnez, Carrie, Ambrogio, Lauren, Nickerson, Elizabeth, Shefler, Erica, Cortés, Maria L., Auclair, Daniel, Saksena, Gordon, Voet, Douglas, Noble, Michael, DiCara, Daniel, Lin, Pei, Lichtenstein, Lee, Heiman, David I., Fennell, Timothy, Imielinski, Marcin, Hernandez, Bryan, Hodis, Eran, Baca, Sylvan, Dulak, Austin M., Lohr, Jens, Landau, Dan-Avi, Wu, Catherine J., Melendez-Zajgla, Jorge, Hidalgo-Miranda, Alfredo, Koren, Amnon, McCarroll, Steven A., Mora, Jaume, Crompton, Brian, Onofrio, Robert, Parkin, Melissa, Winckler, Wendy, Ardlie, Kristin, Gabriel, Stacey B., Roberts, Charles W. M., Biegel, Jaclyn A., Stegmaier, Kimberly, Bass, Adam J., Garraway, Levi A., Meyerson, Matthew, Golub, Todd R., Gordenin, Dmitry A., Sunyaev, Shamil, Lander, Eric S., Getz, Gad
Publicado em 2013