Reply to “Is physical performance (in mice) increased by Veillonella atypica or decreased by Lactobacillus bulgaricus?”

Por Kostic, Aleksandar D.
Publicado no J Sport Health Sci (2020)

Processing of inflected adjectives

Por Filipović Dušica, Kostić Aleksandar Đ.
Publicado em 2003-01-01

Keystone microbiome meeting 2012: a mountain top experience

Por Kostic, Aleksandar D, Garrett, Wendy S
Publicado em 2012

Exploring host–microbiota interactions in animal models and humans

Por Kostic, Aleksandar D., Howitt, Michael R., Garrett, Wendy S.
Publicado em 2013

The Microbiome in Inflammatory Bowel Diseases: Current Status and the Future Ahead

Por Kostic, Aleksandar D., Xavier, Ramnik J., Gevers, Dirk
Publicado em 2014

Inflammatory bowel disease as a model for translating the microbiome

Por Huttenhower, Curtis, Kostic, Aleksandar D., Xavier, Ramnik J.
Publicado em 2014

An integrative view of microbiome-host interactions in inflammatory bowel diseases

Por Wlodarska, Marta, Kostic, Aleksandar D., Xavier, Ramnik J.
Publicado no Cell Host Microbe (2015)

The TPR-containing domain within Est1 homologs exhibits species-specific roles in telomerase interaction and telomere length homeostasis

Por Sealey, David CF, Kostic, Aleksandar D, LeBel, Catherine, Pryde, Fiona, Harrington, Lea
Publicado em 2011

A Microbiome Foundation for the Study of Crohn’s Disease

Por Gevers, Dirk, Kugathasan, Subra, Knights, Dan, Kostic, Aleksandar D., Knight, Rob, Xavier, Ramnik J.
Publicado no Cell Host Microbe (2017)

Aether: leveraging linear programming for optimal cloud computing in genomics

Por Luber, Jacob M, Tierney, Braden T, Cofer, Evan M, Patel, Chirag J, Kostic, Aleksandar D
Publicado no Bioinformatics (2018)

PathSeq: A comprehensive computational tool for the identification or discovery of microorganisms by deep sequencing of human tissue

Por Kostic, Aleksandar D, Ojesina, Akinyemi I, Pedamallu, Chandra Sekhar, Jung, Joonil, Getz, Gad, Meyerson, Matthew
Publicado em 2011

A systematic machine learning and data type comparison yields metagenomic predictors of infant age, sex, breastfeeding, antibiotic usage, country of origin, and delivery type

Por Le Goallec, Alan, Tierney, Braden T., Luber, Jacob M., Cofer, Evan M., Kostic, Aleksandar D., Patel, Chirag J.
Publicado no PLoS Comput Biol (2020)

The Landscape of Genetic Content in the Gut and Oral Human Microbiome

Por Tierney, Braden T., Yang, Zhen, Luber, Jacob M., Beaudin, Marc, Wibowo, Marsha C, Baek, Christina, Mehlenbacher, Eleanor, Patel, Chirag J, Kostic, Aleksandar D.
Publicado no Cell Host Microbe (2019)

Predictive metabolomic profiling of microbial communities using amplicon or metagenomic sequences

Por Mallick, Himel, Franzosa, Eric A., Mclver, Lauren J., Banerjee, Soumya, Sirota-Madi, Alexandra, Kostic, Aleksandar D., Clish, Clary B., Vlamakis, Hera, Xavier, Ramnik J., Huttenhower, Curtis
Publicado no Nat Commun (2019)

Dysbiosis, inflammation, and response to treatment: a longitudinal study of pediatric subjects with newly diagnosed inflammatory bowel disease

Por Shaw, Kelly A., Bertha, Madeline, Hofmekler, Tatyana, Chopra, Pankaj, Vatanen, Tommi, Srivatsa, Abhiram, Prince, Jarod, Kumar, Archana, Sauer, Cary, Zwick, Michael E., Satten, Glen A., Kostic, Aleksandar D., Mulle, Jennifer G., Xavier, Ramnik J., Kugathasan, Subra
Publicado no Genome Med (2016)

Fusobacterium nucleatum potentiates intestinal tumorigenesis and modulates the tumor immune microenvironment

Por Kostic, Aleksandar D., Chun, Eunyoung, Robertson, Lauren, Glickman, Jonathan N., Gallini, Carey Ann, Michaud, Monia, Clancy, Thomas E., Chung, Daniel C., Lochhead, Paul, Hold, Georgina L., El-Omar, Emad M., Brenner, Dean, Fuchs, Charles S., Meyerson, Matthew, Garrett, Wendy S.
Publicado em 2013

Intestinal virome changes precede autoimmunity in type I diabetes-susceptible children

Por Zhao, Guoyan, Vatanen, Tommi, Droit, Lindsay, Park, Arnold, Kostic, Aleksandar D., Poon, Tiffany W., Vlamakis, Hera, Siljander, Heli, Härkönen, Taina, Hämäläinen, Anu-Maaria, Peet, Aleksandr, Tillmann, Vallo, Ilonen, Jorma, Wang, David, Knip, Mikael, Xavier, Ramnik J., Virgin, Herbert W.
Publicado no Proc Natl Acad Sci U S A (2017)

Genomic analysis identifies association of Fusobacterium with colorectal carcinoma

Por Kostic, Aleksandar D., Gevers, Dirk, Pedamallu, Chandra Sekhar, Michaud, Monia, Duke, Fujiko, Earl, Ashlee M., Ojesina, Akinyemi I., Jung, Joonil, Bass, Adam J., Tabernero, Josep, Baselga, José, Liu, Chen, Shivdasani, Ramesh A., Ogino, Shuji, Birren, Bruce W., Huttenhower, Curtis, Garrett, Wendy S., Meyerson, Matthew
Publicado em 2012

Assessment of the cPAS-based BGISEQ-500 platform for metagenomic sequencing

Por Fang, Chao, Zhong, Huanzi, Lin, Yuxiang, Chen, Bing, Han, Mo, Ren, Huahui, Lu, Haorong, Luber, Jacob M, Xia, Min, Li, Wangsheng, Stein, Shayna, Xu, Xun, Zhang, Wenwei, Drmanac, Radoje, Wang, Jian, Yang, Huanming, Hammarström, Lennart, Kostic, Aleksandar D, Kristiansen, Karsten, Li, Junhua
Publicado no Gigascience (2017)

Human Genome-Wide RNAi Screen Identifies an Essential Role for Inositol Pyrophosphates in Type-I Interferon Response

Por Pulloor, Niyas Kudukkil, Nair, Sajith, Kostic, Aleksandar D., Bist, Pradeep, Weaver, Jeremy D., Riley, Andrew M., Tyagi, Richa, Uchil, Pradeep D., York, John D., Snyder, Solomon H., García-Sastre, Adolfo, Potter, Barry V. L., Lin, Rongtuan, Shears, Stephen B., Xavier, Ramnik J., Krishnan, Manoj N.
Publicado em 2014