Open source tool for prediction of genome wide protein-protein interaction network based on ortholog information

द्वारा Pedamallu, Chandra Sekhar, Posfai, Janos
प्रकाशित 2010

Faster Protein Splicing with the Nostoc punctiforme DnaE Intein Using Non-native Extein Residues

द्वारा Cheriyan, Manoj, Pedamallu, Chandra Sekhar, Tori, Kazuo, Perler, Francine
प्रकाशित 2013

Cloning of NruI and Sbo13I restriction and modification sstems in E. coli and amino acid sequence comparison of M.NruI and M.Sbo13I with other amino-methyltransferases

द्वारा Zhu, Zhenyu, Pedamallu, Chandra Sekhar, Fomenkov, Alexey, Benner, Jack, Xu, Shuang-yong
प्रकाशित 2010

PathSeq: A comprehensive computational tool for the identification or discovery of microorganisms by deep sequencing of human tissue

द्वारा Kostic, Aleksandar D, Ojesina, Akinyemi I, Pedamallu, Chandra Sekhar, Jung, Joonil, Getz, Gad, Meyerson, Matthew
प्रकाशित 2011

Kmt2a cooperates with menin to suppress tumorigenesis in mouse pancreatic islets

द्वारा Lin, Wenchu, Francis, Joshua M., Li, Hong, Gao, Xiaoping, Pedamallu, Chandra Sekhar, Ernst, Patricia, Meyerson, Matthew
में प्रकाशित Cancer Biol Ther (2016)

GATK PathSeq: a customizable computational tool for the discovery and identification of microbial sequences in libraries from eukaryotic hosts

द्वारा Walker, Mark A, Pedamallu, Chandra Sekhar, Ojesina, Akinyemi I, Bullman, Susan, Sharpe, Ted, Whelan, Christopher W, Meyerson, Matthew
में प्रकाशित Bioinformatics (2018)

Modeling Genomic Instability and Selection Pressure in a Mouse Model of Melanoma

द्वारा Kwong, Lawrence N, Zou, Lihua, Chagani, Sharmeen, Pedamallu, Chandra Sekhar, Liu, Mingguang, Jiang, Shan, Protopopov, Alexei, Zhang, Jianhua, Getz, Gad, Chin, Lynda
में प्रकाशित Cell Rep (2017)

In search of a candidate pathogen for giant cell arteritis: sequencing based characterization of the giant cell arteritis microbiome

द्वारा Bhatt, Ami S., Manzo, Veronica E., Pedamallu, Chandra Sekhar, Duke, Fujiko, Cai, Diana, Bienfang, Don C., Padera, Robert F., Meyerson, Matthew, Docken, William P.
प्रकाशित 2014

Validation and Calibration of Next-Generation Sequencing to Identify Epstein-Barr Virus-Positive Gastric Cancer in The Cancer Genome Atlas

द्वारा Camargo, M. Constanza, Bowlby, Reanne, Chu, Andy, Pedamallu, Chandra Sekhar, Thorsson, Vesteinn, Elmore, Sandra, Mungall, Andrew J., Bass, Adam J., Gulley, Margaret L., Rabkin, Charles S.
में प्रकाशित Gastric Cancer (2015)

Targeting the oncogene LSF with either the small molecule inhibitor FQI1 or siRNA causes mitotic delays with unaligned chromosomes, resulting in cell death or senescence

द्वारा Willoughby, Jennifer L. S., George, Kelly, Roberto, Mark P., Chin, Hang Gyeong, Stoiber, Patrick, Shin, Hyunjin, Pedamallu, Chandra Sekhar, Schaus, Scott E., Fitzgerald, Kevin, Shah, Jagesh, Hansen, Ulla
में प्रकाशित BMC Cancer (2020)

The tumor virus landscape of AIDS-related lymphomas

द्वारा Arvey, Aaron, Ojesina, Akinyemi I., Pedamallu, Chandra Sekhar, Ballon, Gianna, Jung, Joonil, Duke, Fujiko, Leoncini, Lorenzo, De Falco, Giulia, Bressman, Eric, Tam, Wayne, Chadburn, Amy, Meyerson, Matthew, Cesarman, Ethel
में प्रकाशित Blood (2015)

A Pan-Cancer Analysis of Transcriptome Changes Associated with Somatic Mutations in U2AF1 Reveals Commonly Altered Splicing Events

द्वारा Brooks, Angela N., Choi, Peter S., de Waal, Luc, Sharifnia, Tanaz, Imielinski, Marcin, Saksena, Gordon, Pedamallu, Chandra Sekhar, Sivachenko, Andrey, Rosenberg, Mara, Chmielecki, Juliann, Lawrence, Michael S., DeLuca, David S., Getz, Gad, Meyerson, Matthew
प्रकाशित 2014

DNA copy number analysis of metastatic urothelial carcinoma with comparison to primary tumors

द्वारा Bambury, Richard M, Bhatt, Ami S, Riester, Markus, Pedamallu, Chandra Sekhar, Duke, Fujiko, Bellmunt, Joaquim, Stack, Edward C, Werner, Lillian, Park, Rachel, Iyer, Gopa, Loda, Massimo, Kantoff, Philip W, Michor, Franziska, Meyerson, Matthew, Rosenberg, Jonathan E
में प्रकाशित BMC Cancer (2015)

Genetic modifiers of EGFR dependence in non-small cell lung cancer

द्वारा Sharifnia, Tanaz, Rusu, Victor, Piccioni, Federica, Bagul, Mukta, Imielinski, Marcin, Cherniack, Andrew D., Pedamallu, Chandra Sekhar, Wong, Bang, Wilson, Frederick H., Garraway, Levi A., Altshuler, David, Golub, Todd R., Root, David E., Subramanian, Aravind, Meyerson, Matthew
में प्रकाशित Proc Natl Acad Sci U S A (2014)

EGFR variant heterogeneity in glioblastoma resolved through single-nucleus sequencing

द्वारा Francis, Joshua M., Zhang, Cheng-Zhong, Maire, Cecile L., Jung, Joonil, Manzo, Veronica E., Adalsteinsson, Viktor A., Homer, Heather, Haidar, Sam, Blumenstiel, Brendan, Pedamallu, Chandra Sekhar, Ligon, Azra H., Love, J. Christopher, Meyerson, Matthew, Ligon, Keith L.
प्रकाशित 2014

Inhibitor-sensitive FGFR2 and FGFR3 mutations in lung squamous cell carcinoma

द्वारा Liao, Rachel G., Jung, Joonil, Tchaicha, Jeremy, Wilkerson, Matthew D., Sivachenko, Andrey, Beauchamp, Ellen M., Liu, Qingsong, Pugh, Trevor J., Pedamallu, Chandra Sekhar, Hayes, D. Neil, Gray, Nathanael S., Getz, Gad, Wong, Kwok-Kin, Haddad, Robert I., Meyerson, Matthew, Hammerman, Peter S.
प्रकाशित 2013

Metagenomic Characterization of Microbial Communities In Situ Within the Deeper Layers of the Ileum in Crohn’s Disease

द्वारा Pedamallu, Chandra Sekhar, Bhatt, Ami S., Bullman, Susan, Fowler, Sharyle, Freeman, Samuel S., Durand, Jacqueline, Jung, Joonil, Duke, Fujiko, Manzo, Veronica, Cai, Diana, Ananthakrishnan, Ashwin, Ojesina, Akinyemi I., Ramachandran, Aruna, Gevers, Dirk, Xavier, Ramnik J., Bhan, Atul K., Meyerson, Matthew, Yajnik, Vijay
में प्रकाशित Cell Mol Gastroenterol Hepatol (2016)

Genomic analysis identifies association of Fusobacterium with colorectal carcinoma

द्वारा Kostic, Aleksandar D., Gevers, Dirk, Pedamallu, Chandra Sekhar, Michaud, Monia, Duke, Fujiko, Earl, Ashlee M., Ojesina, Akinyemi I., Jung, Joonil, Bass, Adam J., Tabernero, Josep, Baselga, José, Liu, Chen, Shivdasani, Ramesh A., Ogino, Shuji, Birren, Bruce W., Huttenhower, Curtis, Garrett, Wendy S., Meyerson, Matthew
प्रकाशित 2012

SOX2 and p63 colocalize at genetic loci in squamous cell carcinomas

द्वारा Watanabe, Hideo, Ma, Qiuping, Peng, Shouyong, Adelmant, Guillaume, Swain, Danielle, Song, Wenyu, Fox, Cameron, Francis, Joshua M., Pedamallu, Chandra Sekhar, DeLuca, David S., Brooks, Angela N., Wang, Su, Que, Jianwen, Rustgi, Anil K., Wong, Kwok-kin, Ligon, Keith L., Liu, X. Shirley, Marto, Jarrod A., Meyerson, Matthew, Bass, Adam J.
प्रकाशित 2014

Sequence-Based Discovery of Bradyrhizobium enterica in Cord Colitis Syndrome

द्वारा Bhatt, Ami S., Freeman, Samuel S., Herrera, Alex F., Pedamallu, Chandra Sekhar, Gevers, Dirk, Duke, Fujiko, Jung, Joonil, Michaud, Monia, Walker, Bruce J., Young, Sarah, Earl, Ashlee M., Kostic, Aleksander D., Ojesina, Akinyemi I., Hasserjian, Robert, Ballen, Karen K., Chen, Yi-Bin, Hobbs, Gabriela, Antin, Joseph H., Soiffer, Robert J., Baden, Lindsey R., Garrett, Wendy S., Hornick, Jason L., Marty, Francisco M., Meyerson, Matthew
प्रकाशित 2013