FRANz: reconstruction of wild multi-generation pedigrees

по Riester, Markus, Stadler, Peter F., Klemm, Konstantin
Опубликовано 2009

Evolution of the cancer genome

по Podlaha, Ondrej, Riester, Markus, De, Subhajyoti, Michor, Franziska
Опубликовано 2012

Highly Specific Gene Silencing by Artificial MicroRNAs in Arabidopsis

по Schwab, Rebecca, Ossowski, Stephan, Riester, Markus, Warthmann, Norman, Weigel, Detlef
Опубликовано 2006

The Doppelgänger Effect: Hidden Duplicates in Databases of Transcriptome Profiles

по Waldron, Levi, Riester, Markus, Ramos, Marcel, Parmigiani, Giovanni, Birrer, Michael
Опубликовано в: J Natl Cancer Inst (2016)

Reliable Analysis of Clinical Tumor-Only Whole-Exome Sequencing Data

по Oh, Sehyun, Geistlinger, Ludwig, Ramos, Marcel, Morgan, Martin, Waldron, Levi, Riester, Markus
Опубликовано в: JCO Clin Cancer Inform (2020)

A Differentiation-Based Phylogeny of Cancer Subtypes

по Riester, Markus, Stephan-Otto Attolini, Camille, Downey, Robert J., Singer, Samuel, Michor, Franziska
Опубликовано 2010

Cross-study validation for the assessment of prediction algorithms

по Bernau, Christoph, Riester, Markus, Boulesteix, Anne-Laure, Parmigiani, Giovanni, Huttenhower, Curtis, Waldron, Levi, Trippa, Lorenzo
Опубликовано 2014

An Evolutionary Approach for Identifying Driver Mutations in Colorectal Cancer

по Foo, Jasmine, Liu, Lin L, Leder, Kevin, Riester, Markus, Iwasa, Yoh, Lengauer, Christoph, Michor, Franziska
Опубликовано в: PLoS Comput Biol (2015)

Distance in cancer gene expression from stem cells predicts patient survival

по Riester, Markus, Wu, Hua-Jun, Zehir, Ahmet, Gönen, Mithat, Moreira, Andre L., Downey, Robert J., Michor, Franziska
Опубликовано в: PLoS One (2017)

HGNChelper: identification and correction of invalid gene symbols for human and mouse

по Oh, Sehyun, Abdelnabi, Jasmine, Al-Dulaimi, Ragheed, Aggarwal, Ayush, Ramos, Marcel, Davis, Sean, Riester, Markus, Waldron, Levi
Опубликовано в: F1000Res (2022)

PureCN: copy number calling and SNV classification using targeted short read sequencing

по Riester, Markus, Singh, Angad P., Brannon, A. Rose, Yu, Kun, Campbell, Catarina D., Chiang, Derek Y., Morrissey, Michael P.
Опубликовано в: Source Code Biol Med (2016)

Combination of a novel gene expression signature with a clinical nomogram improves the prediction of survival in high-risk bladder cancer

по Riester, Markus, Taylor, Jennifer M., Feifer, Andrew, Koppie, Theresa, Rosenberg, Jonathan E., Downey, Robert J., Bochner, Bernard H., Michor, Franziska
Опубликовано 2012

Most human non-GCIMP glioblastoma subtypes evolve from a common proneural-like precursor glioma

по Ozawa, Tatsuya, Riester, Markus, Cheng, Yu-Kang, Huse, Jason T, Squatrito, Massimo, Helmy, Karim, Charles, Nikki, Michor, Franziska, Holland, Eric C.
Опубликовано 2014

ESTs and EST-linked polymorphisms for genetic mapping and phylogenetic reconstruction in the guppy, Poecilia reticulata

по Dreyer, Christine, Hoffmann, Margarete, Lanz, Christa, Willing, Eva-Maria, Riester, Markus, Warthmann, Norman, Sprecher, Andrea, Tripathi, Namita, Henz, Stefan R, Weigel, Detlef
Опубликовано 2007

Identification of Nine Genomic Regions of Amplification in Urothelial Carcinoma, Correlation with Stage, and Potential Prognostic and Therapeutic Value

по Chekaluk, Yvonne, Wu, Chin-Lee, Rosenberg, Jonathan, Riester, Markus, Dai, Qishan, Lin, Sharron, Guo, Yanan, McDougal, W. Scott, Kwiatkowski, David J.
Опубликовано 2013

Risk Prediction for Late-Stage Ovarian Cancer by Meta-analysis of 1525 Patient Samples

по Riester, Markus, Wei, Wei, Waldron, Levi, Culhane, Aedin C., Trippa, Lorenzo, Oliva, Esther, Kim, Sung-hoon, Michor, Franziska, Huttenhower, Curtis, Parmigiani, Giovanni, Birrer, Michael J.
Опубликовано в: J Natl Cancer Inst (2014)

Molecular analysis of a male breast cancer patient with prolonged stable disease under mTOR/PI3K inhibitors BEZ235/everolimus

по Brannon, A. Rose, Frizziero, Melissa, Chen, David, Hummel, Jennifer, Gallo, Jorge, Riester, Markus, Patel, Parul, Cheung, Wing, Morrissey, Michael, Carbone, Carmine, Cottini, Silvia, Tortora, Giampaolo, Melisi, Davide
Опубликовано в: Cold Spring Harb Mol Case Stud (2016)

curatedOvarianData: clinically annotated data for the ovarian cancer transcriptome

по Ganzfried, Benjamin Frederick, Riester, Markus, Haibe-Kains, Benjamin, Risch, Thomas, Tyekucheva, Svitlana, Jazic, Ina, Wang, Xin Victoria, Ahmadifar, Mahnaz, Birrer, Michael J., Parmigiani, Giovanni, Huttenhower, Curtis, Waldron, Levi
Опубликовано 2013

Somatic Copy Number Abnormalities and Mutations in PI3K/AKT/mTOR Pathway Have Prognostic Significance for Overall Survival in Platinum Treated Locally Advanced or Metastatic Urothe...

по Bellmunt, Joaquim, Werner, Lillian, Leow, Jeffrey J., Mullane, Stephanie A., Fay, André P., Riester, Markus, Van Hummelen, Paul, Taplin, Mary-Ellen, Choueiri, Toni K., Van Allen, Eliezer, Rosenberg, Jonathan
Опубликовано в: PLoS One (2015)

Aberration in DNA Methylation in B-Cell Lymphomas Has a Complex Origin and Increases with Disease Severity

по De, Subhajyoti, Shaknovich, Rita, Riester, Markus, Elemento, Olivier, Geng, Huimin, Kormaksson, Matthias, Jiang, Yanwen, Woolcock, Bruce, Johnson, Nathalie, Polo, Jose M., Cerchietti, Leandro, Gascoyne, Randy D., Melnick, Ari, Michor, Franziska
Опубликовано 2013