Integrating diverse genomic data using gene sets

le Tyekucheva, Svitlana, Marchionni, Luigi, Karchin, Rachel, Parmigiani, Giovanni
Foilsithe 2011

A Macaque's-Eye View of Human Insertions and Deletions: Differences in Mechanisms

le Kvikstad, Erika M, Tyekucheva, Svitlana, Chiaromonte, Francesca, Makova, Kateryna D
Foilsithe 2007

The genome-wide determinants of human and chimpanzee microsatellite evolution

le Kelkar, Yogeshwar D., Tyekucheva, Svitlana, Chiaromonte, Francesca, Makova, Kateryna D.
Foilsithe 2008

De novo fatty acid synthesis at the mitotic exit is required to complete cellular division

le Scaglia, Natalia, Tyekucheva, Svitlana, Zadra, Giorgia, Photopoulos, Cornelia, Loda, Massimo
Foilsithe 2014

A new classification of benign, premalignant, and malignant endometrial tissues using machine learning applied to 1413 candidate variables.

le Downing, Michael J., Papke, David J., Tyekucheva, Svitlana, Mutter, George L.
Foilsithe in Int J Gynecol Pathol (2020)

Genomic Environment Predicts Expression Patterns on the Human Inactive X Chromosome

le Carrel, Laura, Park, Chungoo, Tyekucheva, Svitlana, Dunn, John, Chiaromonte, Francesca, Makova, Kateryna D
Foilsithe 2006

ESPERR: Learning strong and weak signals in genomic sequence alignments to identify functional elements

le Taylor, James, Tyekucheva, Svitlana, King, David C., Hardison, Ross C., Miller, Webb, Chiaromonte, Francesca
Foilsithe 2006

Human-macaque comparisons illuminate variation in neutral substitution rates

le Tyekucheva, Svitlana, Makova, Kateryna D, Karro, John E, Hardison, Ross C, Miller, Webb, Chiaromonte, Francesca
Foilsithe 2008

Metabolic Profiling in Formalin-Fixed and Paraffin-Embedded Prostate Cancer Tissues

le Cacciatore, Stefano, Zadra, Giorgia, Bango, Clyde, Penney, Kathryn L., Tyekucheva, Svitlana, Yanes, Oscar, Loda, Massimo
Foilsithe in Mol Cancer Res (2017)

Cancer-specific High-throughput Annotation of Somatic Mutations: computational prediction of driver missense mutations

le Carter, Hannah, Chen, Sining, Isik, Leyla, Tyekucheva, Svitlana, Velculescu, Victor E., Kinzler, Kenneth W., Vogelstein, Bert, Karchin, Rachel
Foilsithe 2009

Establishing the baseline level of repetitive element expression in the human cortex

le Tyekucheva, Svitlana, Yolken, Robert H, McCombie, W Richard, Parla, Jennifer, Kramer, Melissa, Wheelan, Sarah J, Sabunciyan, Sarven
Foilsithe 2011

Computational Reconstruction of NFκB Pathway Interaction Mechanisms during Prostate Cancer

le Börnigen, Daniela, Tyekucheva, Svitlana, Wang, Xiaodong, Rider, Jennifer R., Lee, Gwo-Shu, Mucci, Lorelei A., Sweeney, Christopher, Huttenhower, Curtis
Foilsithe in PLoS Comput Biol (2016)

A novel eQTL-based analysis reveals the biology of breast cancer risk loci

le Li, Qiyuan, Seo, Ji-Heui, Stranger, Barbara, McKenna, Aaron, Pe'er, Itsik, LaFramboise, Thomas, Brown, Myles, Tyekucheva, Svitlana, Freedman, Matthew L.
Foilsithe 2013

Low expression of the androgen-induced tumor suppressor gene PLZF and lethal prostate cancer

le Stopsack, Konrad H., Gerke, Travis, Tyekucheva, Svitlana, Mazzu, Ying Z., Lee, Gwo-Shu Mary, Chakraborty, Goutam, Abida, Wassim, Mucci, Lorelei A., Kantoff, Philip W.
Foilsithe in Cancer Epidemiol Biomarkers Prev (2019)

MYC Overexpression at the Protein and mRNA Level and Cancer Outcomes among Men Treated with Radical Prostatectomy for Prostate Cancer

le Pettersson, Andreas, Gerke, Travis, Penney, Kathryn L., Lis, Rosina T., Stack, Edward C., Pértega-Gomes, Nelma, Zadra, Giorgia, Tyekucheva, Svitlana, Giovannucci, Edward L., Mucci, Lorelei A., Loda, Massimo
Foilsithe in Cancer Epidemiol Biomarkers Prev (2017)

A phase 1b/2 study of duvelisib in combination with FCR (DFCR) for frontline therapy for younger CLL patients

le Davids, Matthew S., Fisher, David C., Tyekucheva, Svitlana, McDonough, Mikaela, Hanna, John, Lee, Brandon, Francoeur, Karen, Montegaard, Josie, Odejide, Oreofe, Armand, Philippe, Arnason, Jon, Brown, Jennifer R.
Foilsithe in Leukemia (2020)

curatedOvarianData: clinically annotated data for the ovarian cancer transcriptome

le Ganzfried, Benjamin Frederick, Riester, Markus, Haibe-Kains, Benjamin, Risch, Thomas, Tyekucheva, Svitlana, Jazic, Ina, Wang, Xin Victoria, Ahmadifar, Mahnaz, Birrer, Michael J., Parmigiani, Giovanni, Huttenhower, Curtis, Waldron, Levi
Foilsithe 2013

Prognostic Utility of a New mRNA Expression Signature of Gleason Score

le Sinnott, Jennifer A., Peisch, Sam F., Tyekucheva, Svitlana, Gerke, Travis, Lis, Rosina, Rider, Jennifer R., Fiorentino, Michelangelo, Stampfer, Meir J., Mucci, Lorelei A., Loda, Massimo, Penney, Kathryn L.
Foilsithe in Clin Cancer Res (2016)

A novel direct activator of AMPK inhibits prostate cancer growth by blocking lipogenesis

le Zadra, Giorgia, Photopoulos, Cornelia, Tyekucheva, Svitlana, Heidari, Pedram, Weng, Qing Ping, Fedele, Giuseppe, Liu, Hong, Scaglia, Natalia, Priolo, Carmen, Sicinska, Ewa, Mahmood, Umar, Signoretti, Sabina, Birnberg, Neal, Loda, Massimo
Foilsithe 2014

A novel direct activator of AMPK inhibits prostate cancer growth by blocking lipogenesis

le Zadra, Giorgia, Photopoulos, Cornelia, Tyekucheva, Svitlana, Heidari, Pedram, Weng, Qing Ping, Fedele, Giuseppe, Liu, Hong, Scaglia, Natalia, Priolo, Carmen, Sicinska, Ewa, Mahmood, Umar, Signoretti, Sabina, Birnberg, Neal, Loda, Massimo
Foilsithe in EMBO Mol Med (2014)