Integrating diverse genomic data using gene sets

Por Tyekucheva, Svitlana, Marchionni, Luigi, Karchin, Rachel, Parmigiani, Giovanni
Publicado em 2011

A Macaque's-Eye View of Human Insertions and Deletions: Differences in Mechanisms

Por Kvikstad, Erika M, Tyekucheva, Svitlana, Chiaromonte, Francesca, Makova, Kateryna D
Publicado em 2007

The genome-wide determinants of human and chimpanzee microsatellite evolution

Por Kelkar, Yogeshwar D., Tyekucheva, Svitlana, Chiaromonte, Francesca, Makova, Kateryna D.
Publicado em 2008

De novo fatty acid synthesis at the mitotic exit is required to complete cellular division

Por Scaglia, Natalia, Tyekucheva, Svitlana, Zadra, Giorgia, Photopoulos, Cornelia, Loda, Massimo
Publicado em 2014

Genomic Environment Predicts Expression Patterns on the Human Inactive X Chromosome

Por Carrel, Laura, Park, Chungoo, Tyekucheva, Svitlana, Dunn, John, Chiaromonte, Francesca, Makova, Kateryna D
Publicado em 2006

ESPERR: Learning strong and weak signals in genomic sequence alignments to identify functional elements

Por Taylor, James, Tyekucheva, Svitlana, King, David C., Hardison, Ross C., Miller, Webb, Chiaromonte, Francesca
Publicado em 2006

Human-macaque comparisons illuminate variation in neutral substitution rates

Por Tyekucheva, Svitlana, Makova, Kateryna D, Karro, John E, Hardison, Ross C, Miller, Webb, Chiaromonte, Francesca
Publicado em 2008

Cancer-specific High-throughput Annotation of Somatic Mutations: computational prediction of driver missense mutations

Por Carter, Hannah, Chen, Sining, Isik, Leyla, Tyekucheva, Svitlana, Velculescu, Victor E., Kinzler, Kenneth W., Vogelstein, Bert, Karchin, Rachel
Publicado em 2009

Establishing the baseline level of repetitive element expression in the human cortex

Por Tyekucheva, Svitlana, Yolken, Robert H, McCombie, W Richard, Parla, Jennifer, Kramer, Melissa, Wheelan, Sarah J, Sabunciyan, Sarven
Publicado em 2011

Computational Reconstruction of NFκB Pathway Interaction Mechanisms during Prostate Cancer

Por Börnigen, Daniela, Tyekucheva, Svitlana, Wang, Xiaodong, Rider, Jennifer R., Lee, Gwo-Shu, Mucci, Lorelei A., Sweeney, Christopher, Huttenhower, Curtis
Publicado no PLoS Comput Biol (2016)

A novel eQTL-based analysis reveals the biology of breast cancer risk loci

Por Li, Qiyuan, Seo, Ji-Heui, Stranger, Barbara, McKenna, Aaron, Pe'er, Itsik, LaFramboise, Thomas, Brown, Myles, Tyekucheva, Svitlana, Freedman, Matthew L.
Publicado em 2013

curatedOvarianData: clinically annotated data for the ovarian cancer transcriptome

Por Ganzfried, Benjamin Frederick, Riester, Markus, Haibe-Kains, Benjamin, Risch, Thomas, Tyekucheva, Svitlana, Jazic, Ina, Wang, Xin Victoria, Ahmadifar, Mahnaz, Birrer, Michael J., Parmigiani, Giovanni, Huttenhower, Curtis, Waldron, Levi
Publicado em 2013

Prognostic Utility of a New mRNA Expression Signature of Gleason Score

Por Sinnott, Jennifer A., Peisch, Sam F., Tyekucheva, Svitlana, Gerke, Travis, Lis, Rosina, Rider, Jennifer R., Fiorentino, Michelangelo, Stampfer, Meir J., Mucci, Lorelei A., Loda, Massimo, Penney, Kathryn L.
Publicado no Clin Cancer Res (2016)

A novel direct activator of AMPK inhibits prostate cancer growth by blocking lipogenesis

Por Zadra, Giorgia, Photopoulos, Cornelia, Tyekucheva, Svitlana, Heidari, Pedram, Weng, Qing Ping, Fedele, Giuseppe, Liu, Hong, Scaglia, Natalia, Priolo, Carmen, Sicinska, Ewa, Mahmood, Umar, Signoretti, Sabina, Birnberg, Neal, Loda, Massimo
Publicado em 2014

A novel direct activator of AMPK inhibits prostate cancer growth by blocking lipogenesis

Por Zadra, Giorgia, Photopoulos, Cornelia, Tyekucheva, Svitlana, Heidari, Pedram, Weng, Qing Ping, Fedele, Giuseppe, Liu, Hong, Scaglia, Natalia, Priolo, Carmen, Sicinska, Ewa, Mahmood, Umar, Signoretti, Sabina, Birnberg, Neal, Loda, Massimo
Publicado no EMBO Mol Med (2014)

Association of Prostate Cancer Risk Variants with Gene Expression in Normal and Tumor Tissue

Por Penney, Kathryn L., Sinnott, Jennifer A., Tyekucheva, Svitlana, Gerke, Travis, Shui, Irene M., Kraft, Peter, Sesso, Howard D., Freedman, Matthew L., Loda, Massimo, Mucci, Lorelei A., Stampfer, Meir J.
Publicado no Cancer Epidemiol Biomarkers Prev (2014)

Comparing Platforms for Messenger RNA Expression Profiling of Archival Formalin-Fixed, Paraffin-Embedded Tissues

Por Tyekucheva, Svitlana, Martin, Neil E., Stack, Edward C., Wei, Wei, Vathipadiekal, Vinod, Waldron, Levi, Fiorentino, Michelangelo, Lis, Rosina T., Stampfer, Meir J., Loda, Massimo, Parmigiani, Giovanni, Mucci, Lorelei A., Birrer, Michael
Publicado no J Mol Diagn (2015)

A Network of Epigenetic Regulators Guide Developmental Hematopoiesis In Vivo

Por Huang, Hsuan-Ting, Kathrein, Katie L., Barton, Abby, Gitlin, Zachary, Huang, Yue-Hua, Ward, Thomas P., Hofmann, Oliver, Dibiase, Anthony, Song, Anhua, Tyekucheva, Svitlana, Hide, Winston, Zhou, Yi, Zon, Leonard I.
Publicado em 2013

Comparative Meta-analysis of Prognostic Gene Signatures for Late-Stage Ovarian Cancer

Por Waldron, Levi, Haibe-Kains, Benjamin, Culhane, Aedín C., Riester, Markus, Ding, Jie, Wang, Xin Victoria, Ahmadifar, Mahnaz, Tyekucheva, Svitlana, Bernau, Christoph, Risch, Thomas, Ganzfried, Benjamin Frederick, Huttenhower, Curtis, Birrer, Michael, Parmigiani, Giovanni
Publicado no J Natl Cancer Inst (2014)

Cholesterol metabolism and prostate cancer lethality

Por Stopsack, Konrad H., Gerke, Travis A., Sinnott, Jennifer A., Penney, Kathryn L., Tyekucheva, Svitlana, Sesso, Howard D., Andersson, Swen-Olof, Andrén, Ove, Cerhan, James R., Giovannucci, Edward L., Mucci, Lorelei A., Rider, Jennifer R.
Publicado no Cancer Res (2016)