FFPE Sequencing and Bioinformatics

af Hoadley, Katherine A.
Udgivet i J Biomol Tech (2019)

A Pan-Cancer and Polygenic Bayesian Hierarchical Model for the Effect of Somatic Mutations on Survival

af Samorodnitsky, Sarah, Hoadley, Katherine A, Lock, Eric F
Udgivet i Cancer Inform (2020)

Identification of mRNA isoform switching in breast cancer

af Zhao, Wei, Hoadley, Katherine A., Parker, Joel S., Perou, Charles M.
Udgivet i BMC Genomics (2016)

Prediction of Toxicant-Specific Gene Expression Signatures after Chemotherapeutic Treatment of Breast Cell Lines

af Troester, Melissa A., Hoadley, Katherine A., Parker, Joel S., Perou, Charles M.
Udgivet 2004

Potential Tumor Suppressor Role for the c-Myb Oncogene in Luminal Breast Cancer

af Thorner, Aaron R., Parker, Joel S., Hoadley, Katherine A., Perou, Charles M.
Udgivet 2010

JOINT AND INDIVIDUAL VARIATION EXPLAINED (JIVE) FOR INTEGRATED ANALYSIS OF MULTIPLE DATA TYPES

af Lock, Eric F., Hoadley, Katherine A., Marron, J.S., Nobel, Andrew B.
Udgivet 2013

Genetic determinants of the molecular portraits of epithelial cancers

af Xia, Youli, Fan, Cheng, Hoadley, Katherine A., Parker, Joel S., Perou, Charles M.
Udgivet i Nat Commun (2019)

Molecular features of the basal-like breast cancer subtype based on BRCA1 mutation status

af Prat, Aleix, Cruz, Cristina, Hoadley, Katherine A., Díez, Orland, Perou, Charles M., Balmaña, Judith
Udgivet 2014

Comparison of RNA-Seq by poly (A) capture, ribosomal RNA depletion, and DNA microarray for expression profiling

af Zhao, Wei, He, Xiaping, Hoadley, Katherine A, Parker, Joel S, Hayes, David Neil, Perou, Charles M
Udgivet 2014

Overexpression of miR-146a in basal-like breast cancer cells confers enhanced tumorigenic potential in association with altered p53 status

af Sandhu, Rupninder, Rein, Jessica, D’Arcy, Monica, Herschkowitz, Jason I., Hoadley, Katherine A., Troester, Melissa A.
Udgivet i Carcinogenesis (2014)

Genomic Analysis of Immune Cell Infiltrates Across 11 Tumor Types

af Iglesia, Michael D., Parker, Joel S., Hoadley, Katherine A., Serody, Jonathan S., Perou, Charles M., Vincent, Benjamin G.
Udgivet i J Natl Cancer Inst (2016)

Age at Diagnosis, Obesity, Smoking, and Molecular Subtypes in Muscle Invasive Bladder Cancer

af Sun, Xuezheng, Hoadley, Katherine A., Kim, William Y., Furberg, Helena, Olshan, Andrew F., Troester, Melissa A.
Udgivet i Cancer Causes Control (2017)

FOXM1 Deubiquitination by USP21 Regulates Cell Cycle Progression and Paclitaxel Sensitivity in Basal-like Breast Cancer

af Arceci, Anthony, Bonacci, Thomas, Wang, Xianxi, Stewart, Kyle, Damrauer, Jeffrey S., Hoadley, Katherine A., Emanuele, Michael J.
Udgivet i Cell Rep (2019)

Amplification of SOX4 promotes PI3K/Akt signaling in human breast cancer

af Mehta, Gaurav A., Parker, Joel S., Silva, Grace O., Hoadley, Katherine A., Perou, Charles M., Gatza, Michael L.
Udgivet i Breast Cancer Res Treat (2017)

Gene expression patterns associated with p53 status in breast cancer

af Troester, Melissa A, Herschkowitz, Jason I, Oh, Daniel S, He, Xiaping, Hoadley, Katherine A, Barbier, Claire S, Perou, Charles M
Udgivet 2006

The molecular diversity of Luminal A breast tumors

af Ciriello, Giovanni, Sinha, Rileen, Hoadley, Katherine A., Jacobsen, Anders S., Reva, Boris, Perou, Charles M., Sander, Chris, Schultz, Nikolaus
Udgivet 2013

Impact of stromal microenvironment on metabolic phenotypes in breast cancer: evidence for stroma-influenced Warburg effect

af Brauer, Heather Ann, Makowski, Liza, Hoadley, Katherine A, Lang, Lindsay J, Freemerman, Alex J, Perou, Charles M, Troester, Melissa A
Udgivet 2012

An approach for normalization and quality control for NanoString RNA expression data

af Bhattacharya, Arjun, Hamilton, Alina M, Furberg, Helena, Pietzak, Eugene, Purdue, Mark P, Troester, Melissa A, Hoadley, Katherine A, Love, Michael I
Udgivet i Brief Bioinform (2020)

Bladder Cancer Molecular Taxonomy: Summary from a Consensus Meeting

af Lerner, Seth P., McConkey, David J., Hoadley, Katherine A., Chan, Keith S., Kim, William Y., Radvanyi, François, Höglund, Mattias, Real, Francisco X.
Udgivet i Bladder Cancer (2016)

Differences in race, molecular and tumor characteristics among women diagnosed with invasive ductal and lobular breast carcinomas

af Williams, Lindsay A., Hoadley, Katherine A., Nichols, Hazel B., Geradts, Joseph, Perou, Charles M., Love, Michael I., Olshan, Andrew F., Troester, Melissa A.
Udgivet i Cancer Causes Control (2019)