Assembling global maps of cellular function through integrative analysis of physical and genetic networks

অনুযায়ী Srivas, Rohith, Hannum, Gregory, Ruscheinski, Johannes, Ono, Keiichiro, Wang, Peng-Liang, Smoot, Michael, Ideker, Trey
প্রকাশিত 2011

Genome-Wide Association Data Reveal a Global Map of Genetic Interactions among Protein Complexes

অনুযায়ী Hannum, Gregory, Srivas, Rohith, Guénolé, Aude, van Attikum, Haico, Krogan, Nevan J., Karp, Richard M., Ideker, Trey
প্রকাশিত 2009

Dissection of DNA Damage Responses Using Multiconditional Genetic Interaction Maps

অনুযায়ী Guénolé, Aude, Srivas, Rohith, Vreeken, Kees, Wang, Ze Zhong, Wang, Shuyi, Krogan, Nevan J., Ideker, Trey, van Attikum, Haico
প্রকাশিত 2012

Global reconstruction of the human metabolic network based on genomic and bibliomic data

অনুযায়ী Duarte, Natalie C., Becker, Scott A., Jamshidi, Neema, Thiele, Ines, Mo, Monica L., Vo, Thuy D., Srivas, Rohith, Palsson, Bernhard Ø.
প্রকাশিত 2007

Translation of Genotype to Phenotype by a Hierarchy of Cell Subsystems

অনুযায়ী Yu, Michael Ku, Kramer, Michael, Dutkowski, Janusz, Srivas, Rohith, Licon, Katherine, Kreisberg, Jason, Ng, Cherie T., Krogan, Nevan, Sharan, Roded, Ideker, Trey
প্রকাশিত Cell Syst (2016)

Yeast PP4 Interacts with ATR Homolog Ddc2-Mec1 and Regulates Checkpoint Signaling

অনুযায়ী Hustedt, Nicole, Seeber, Andrew, Sack, Ragna, Tsai-Pflugfelder, Monika, Bhullar, Bhupinder, Vlaming, Hanneke, van Leeuwen, Fred, Guénolé, Aude, van Attikum, Haico, Srivas, Rohith, Ideker, Trey, Shimada, Kenji, Gasser, Susan M.
প্রকাশিত Mol Cell (2014)

Quantitative Proteomics Reveal ATM Kinase-dependent Exchange in DNA Damage Response Complexes

অনুযায়ী Choi, Serah, Srivas, Rohith, Fu, Katherine Y., Hood, Brian L., Dost, Banu, Gibson, Gregory A., Watkins, Simon C., Van Houten, Bennett, Bandeira, Nuno, Conrads, Thomas P., Ideker, Trey, Bakkenist, Christopher J.
প্রকাশিত 2012

Remodeling of active endothelial enhancers is associated with aberrant gene-regulatory networks in pulmonary arterial hypertension

অনুযায়ী Reyes-Palomares, Armando, Gu, Mingxia, Grubert, Fabian, Berest, Ivan, Sa, Silin, Kasowski, Maya, Arnold, Christian, Shuai, Mao, Srivas, Rohith, Miao, Simon, Li, Dan, Snyder, Michael P., Rabinovitch, Marlene, Zaugg, Judith B.
প্রকাশিত Nat Commun (2020)

A UV–Induced Genetic Network Links the RSC Complex to Nucleotide Excision Repair and Shows Dose-Dependent Rewiring

অনুযায়ী Srivas, Rohith, Costelloe, Thomas, Carvunis, Anne-Ruxandra, Sarkar, Sovan, Malta, Erik, Sun, Su Ming, Pool, Marijke, Licon, Katherine, van Welsem, Tibor, van Leeuwen, Fred, McHugh, Peter J., van Attikum, Haico, Ideker, Trey
প্রকাশিত 2013

Landscape of cohesin-mediated chromatin loops in the human genome

অনুযায়ী Grubert, Fabian, Srivas, Rohith, Spacek, Damek  V, Kasowski, Maya, Ruiz-Velasco, Mariana, Sinnott-Armstrong, Nasa, Greenside, Peyton, Narasimha, Anil, Liu, Qing, Geller, Benjamin, Sanghi, Akshay, Kulik, Michael, Sa, Silin, Rabinovitch, Marlene, Kundaje, Anshul, Dalton, Stephen, Zaugg, Judith B., Snyder, Michael
প্রকাশিত Nature (2020)

Genetic Control of Chromatin States in Humans Involves Local and Distal Chromosomal Interactions

অনুযায়ী Grubert, Fabian, Zaugg, Judith B., Kasowski, Maya, Ursu, Oana, Spacek, Damek V., Martin, Alicia R., Greenside, Peyton, Srivas, Rohith, Phanstiel, Doug H., Pekowska, Aleksandra, Heidari, Nastaran, Euskirchen, Ghia, Huber, Wolfgang, Pritchard, Jonathan K., Bustamante, Carlos D., Steinmetz, Lars M., Kundaje, Anshul, Snyder, Michael
প্রকাশিত Cell (2015)

Chemogenetic profiling identifies RAD17 as synthetically lethal with checkpoint kinase inhibition

অনুযায়ী Shen, John Paul, Srivas, Rohith, Gross, Andrew, Li, Jianfeng, Jaehnig, Eric J., Sun, Su Ming, Bojorquez-Gomez, Ana, Licon, Katherine, Sivaganesh, Vignesh, Xu, Jia L., Klepper, Kristin, Yeerna, Huwate, Pekin, Daniel, Qiu, Chu Ping, van Attikum, Haico, Sobol, Robert W., Ideker, Trey
প্রকাশিত Oncotarget (2015)

Early Assessment of Molecular Progression and Response by Whole-genome Circulating Tumor DNA in Advanced Solid Tumors

অনুযায়ী Davis, Andrew A., Iams, Wade T., Chan, David, Oh, Michael S., Lentz, Robert W., Peterman, Neil, Robertson, Alex, Shah, Abhik, Srivas, Rohith, Wilson, Timothy J., Lambert, Nicole J., George, Peter S., Wong, Becky, Wood, Haleigh W., Close, Jason C., Tezcan, Ayse, Nesmith, Ken, Tezcan, Haluk, Chae, Young Kwang
প্রকাশিত Mol Cancer Ther (2020)

Transcriptional repression of IFNβ1 by ATF2 confers melanoma resistance to therapy

অনুযায়ী Lau, Eric, Sedy, John, Sander, Cindy, Shaw, Misa Austin, Feng, Yongmei, Scortegagna, Marzia, Claps, Giuseppina, Robinson, Steven, Cheng, Phil, Srivas, Rohith, Soonthornvacharin, Stephen, Ideker, Trey, Bosenberg, Marcus, Gonzalez, Réné, Robinson, William, Chanda, Sumit, Ware, Carl, Dummer, Reinhard, Hoon, Dave, Kirkwood, John M., Ronai, Ze'ev A
প্রকাশিত Oncogene (2015)

Disease Model of GATA4 Mutation Reveals Transcription Factor Cooperativity in Human Cardiogenesis

অনুযায়ী Ang, Yen-Sin, Rivas, Renee N., Ribeiro, Alexandre J. S., Srivas, Rohith, Rivera, Janell, Stone, Nicole R., Pratt, Karishma, Mohamed, Tamer M. A., Fu, Ji-Dong, Spencer, C. Ian, Tippens, Nathaniel D., Li, Molong, Narasimha, Anil, Radzinsky, Ethan, Moon-Grady, Anita, Yu, Haiyuan, Pruitt, Beth L., Snyder, Michael, Srivastava, Deepak
প্রকাশিত Cell (2016)

A network of conserved synthetic lethal interactions for exploration of precision cancer therapy

অনুযায়ী Srivas, Rohith, Shen, John Paul, Yang, Chih Cheng, Sun, Su Ming, Li, Jianfeng, Gross, Andrew M., Jensen, James, Licon, Katherine, Bojorquez-Gomez, Ana, Klepper, Kristin, Huang, Justin, Pekin, Daniel, Xu, Jia L., Yeerna, Huwate, Sivaganesh, Vignesh, Kollenstart, Leonie, van Attikum, Haico, Aza-Blanc, Pedro, Sobol, Robert W., Ideker, Trey
প্রকাশিত Mol Cell (2016)

Dot1 promotes H2B ubiquitination by a methyltransferase-independent mechanism

অনুযায়ী van Welsem, Tibor, Korthout, Tessy, Ekkebus, Reggy, Morais, Dominique, Molenaar, Thom M, van Harten, Kirsten, Poramba-Liyanage, Deepani W, Sun, Su Ming, Lenstra, Tineke L, Srivas, Rohith, Ideker, Trey, Holstege, Frank C P, van Attikum, Haico, El Oualid, Farid, Ovaa, Huib, Stulemeijer, Iris J E, Vlaming, Hanneke, van Leeuwen, Fred
প্রকাশিত Nucleic Acids Res (2018)