Analysis of Histones H3 and H4 Reveals Novel and Conserved Post-Translational Modifications in Sugarcane

af Moraes, Izabel, Yuan, Zuo-Fei, Liu, Shichong, Souza, Glaucia Mendes, Garcia, Benjamin A., Casas-Mollano, J. Armando
Udgivet i PLoS One (2015)

ChIP-less analysis of chromatin states

af Su, Zhangli, Boersma, Melissa D, Lee, Jin-Hee, Oliver, Samuel S, Liu, Shichong, Garcia, Benjamin A, Denu, John M
Udgivet 2014

A Proteomic Glimpse into the Initial Global Epigenetic Changes During HIV Infection

af Britton, Laura-Mae P., Sova, Pavel, Belisle, Sarah, Liu, Shichong, Chan, Eric Y., Katze, Michael G., Garcia, Benjamin A.
Udgivet 2014

Vitamin C induces specific demethylation of H3K9me2 in mouse embryonic stem cells via Kdm3a/b

af Ebata, Kevin T., Mesh, Kathryn, Liu, Shichong, Bilenky, Misha, Fekete, Alexander, Acker, Michael G., Hirst, Martin, Garcia, Benjamin A., Ramalho-Santos, Miguel
Udgivet i Epigenetics Chromatin (2017)

EpiProfile Quantifies Histone Peptides With Modifications by Extracting Retention Time and Intensity in High-resolution Mass Spectra

af Yuan, Zuo-Fei, Lin, Shu, Molden, Rosalynn C., Cao, Xing-Jun, Bhanu, Natarajan V., Wang, Xiaoshi, Sidoli, Simone, Liu, Shichong, Garcia, Benjamin A.
Udgivet i Mol Cell Proteomics (2015)

A Specific LSD1/KDM1A Isoform Regulates Neuronal Differentiation through H3K9 Demethylation

af Laurent, Benoit, Ruitu, Lv, Murn, Jernej, Hempel, Kristina, Ferrao, Ryan, Xiang, Yang, Liu, Shichong, Garcia, Benjamin A., Wu, Hao, Wu, Feizhen, Steen, Hanno, Shi, Yang
Udgivet i Mol Cell (2015)

Memory acquisition and retrieval impact different epigenetic processes that regulate gene expression

af Peixoto, Lucia L, Wimmer, Mathieu E, Poplawski, Shane G, Tudor, Jennifer C, Kenworthy, Charles A, Liu, Shichong, Mizuno, Keiko, Garcia, Benjamin A, Zhang, Nancy R, Giese, K Peter, Abel, Ted
Udgivet i BMC Genomics (2015)

MacroH2A histone variants act as a barrier upon reprogramming towards pluripotency

af Gaspar-Maia, Alexandre, Qadeer, Zulekha A., Hasson, Dan, Ratnakumar, Kajan, Leu, N. Adrian, Leroy, Gary, Liu, Shichong, Costanzi, Carl, Valle-Garcia, David, Schaniel, Christoph, Lemischka, Ihor, Garcia, Benjamin, Pehrson, John R., Bernstein, Emily
Udgivet 2013

Smyd3 regulates cancer cell phenotypes and catalyzes histone H4 lysine 5 methylation

af Van Aller, Glenn S., Reynoird, Nicolas, Barbash, Olena, Huddleston, Michael, Liu, Shichong, Zmoos, Anne-Flore, McDevitt, Patrick, Sinnamon, Robert, Le, BaoChau, Mas, Gloria, Annan, Roland, Sage, Julien, Garcia, Benjamin A., Tummino, Peter J., Gozani, Or, Kruger, Ryan G.
Udgivet 2012

TDP-43 promotes neurodegeneration by impairing chromatin remodeling

af Berson, Amit, Sartoris, Ashley, Nativio, Raffaella, Van Deerlin, Vivianna, Toledo, Jon B., Porta, Sílvia, Liu, Shichong, Chung, Chia-Yu, Garcia, Benjamin A., Lee, Virginia M.-Y., Trojanowski, John Q., Johnson, F. Brad, Berger, Shelley L., Bonini, Nancy M.
Udgivet i Curr Biol (2017)

SMYD3 links lysine methylation of MAP3K2 to Ras-driven cancer

af Mazur, Pawel K., Reynoird, Nicolas, Khatri, Purvesh, Jansen, Pascal W.T.C., Wilkinson, Alex, Liu, Shichong, Barbash, Olena, Van Aller, Glenn S., Huddleston, Michael, Dhanak, Dashyant, Tummino, Peter J., Kruger, Ryan G., Garcia, Benjamin, Butte, Atul J., Vermeulen, Michiel, Sage, Julien, Gozani, Or
Udgivet 2014

Drawbacks in the use of unconventional hydrophobic anhydrides for histone derivatization in bottom-up proteomics PTM analysis

af Sidoli, Simone, Yuan, Zuo-Fei, Lin, Shu, Karch, Kelly, Wang, Xiaoshi, Bhanu, Natarajan, Arnaudo, Anna M., Britton, Laura-Mae, Cao, Xing-Jun, Gonzales-Cope, Michelle, Han, Yumiao, Liu, Shichong, Molden, Rosalynn C., Wein, Samuel, Afjehi-Sadat, Leila, Garcia, Benjamin A.
Udgivet i Proteomics (2015)

Selective inhibition of EZH2 and EZH1 enzymatic activity by a small molecule suppresses MLL-rearranged leukemia

af Xu, Bowen, On, Doan M., Ma, Anqi, Parton, Trevor, Konze, Kyle D., Pattenden, Samantha G., Allison, David F., Cai, Ling, Rockowitz, Shira, Liu, Shichong, Liu, Ying, Li, Fengling, Vedadi, Masoud, Frye, Stephen V., Garcia, Benjamin A., Zheng, Deyou, Jin, Jian, Wang, Gang Greg
Udgivet i Blood (2015)

Optical High Content Nanoscopy of Epigenetic Marks Decodes Phenotypic Divergence in Stem Cells

af Kim, Joseph J., Bennett, Neal K., Devita, Mitchel S., Chahar, Sanjay, Viswanath, Satish, Lee, Eunjee A., Jung, Giyoung, Shao, Paul P., Childers, Erin P., Liu, Shichong, Kulesa, Anthony, Garcia, Benjamin A., Becker, Matthew L., Hwang, Nathaniel S., Madabhushi, Anant, Verzi, Michael P., Moghe, Prabhas V.
Udgivet i Sci Rep (2017)

Akt-dependent metabolic reprogramming regulates tumor cell histone acetylation

af Lee, Joyce V., Carrer, Alessandro, Shah, Supriya, Snyder, Nathaniel W., Wei, Shuanzeng, Venneti, Sriram, Worth, Andrew J., Yuan, Zuo-Fei, Lim, Hee-Woong, Liu, Shichong, Jackson, Ellen, Aiello, Nicole M., Haas, Naomi B., Rebbeck, Timothy R., Judkins, Alexander, Won, Kyoung-Jae, Chodosh, Lewis A., Garcia, Benjamin A., Stanger, Ben Z., Feldman, Michael D., Blair, Ian A., Wellen, Kathryn E.
Udgivet 2014

LLY-507, a Cell-active, Potent, and Selective Inhibitor of Protein-lysine Methyltransferase SMYD2

af Nguyen, Hannah, Allali-Hassani, Abdellah, Antonysamy, Stephen, Chang, Shawn, Chen, Lisa Hong, Curtis, Carmen, Emtage, Spencer, Fan, Li, Gheyi, Tarun, Li, Fengling, Liu, Shichong, Martin, Joseph R., Mendel, David, Olsen, Jonathan B., Pelletier, Laura, Shatseva, Tatiana, Wu, Song, Zhang, Feiyu Fred, Arrowsmith, Cheryl H., Brown, Peter J., Campbell, Robert M., Garcia, Benjamin A., Barsyte-Lovejoy, Dalia, Mader, Mary, Vedadi, Masoud
Udgivet i J Biol Chem (2015)

The histone lysine methyltransferase KMT2D sustains a gene expression program that represses B cell lymphoma development

af Ortega-Molina, Ana, Boss, Isaac W., Canela, Andres, Pan, Heng, Jiang, Yanwen, Zhao, Chunying, Jiang, Man, Hu, Deqing, Agirre, Xabier, Niesvizky, Itamar, Lee, Ji-Eun, Chen, Hua-Tang, Ennishi, Daisuke, Scott, David W., Mottok, Anja, Hother, Christoffer, Liu, Shichong, Cao, Xing-Jun, Tam, Wayne, Shaknovich, Rita, Garcia, Benjamin A., Gascoyne, Randy D., Ge, Kai, Shilatifard, Ali, Elemento, Olivier, Nussenzweig, Andre, Melnick, Ari M., Wendel, Hans-Guido
Udgivet i Nat Med (2015)