Systematic bias in high-throughput sequencing data and its correction by BEADS

Por Cheung, Ming-Sin, Down, Thomas A., Latorre, Isabel, Ahringer, Julie
Publicado em 2011

Differential chromatin marking of introns and expressed exons by H3K36me3

Por Kolasinska-Zwierz, Paulina, Down, Thomas, Latorre, Isabel, Liu, Tao, Liu, X. Shirley, Ahringer, Julie
Publicado em 2009

Viral oncoprotein-induced mislocalization of select PDZ proteins disrupts tight junctions and causes polarity defects in epithelial cells

Por Latorre, Isabel J., Roh, Michael H., Frese, Kristopher K., Weiss, Robert S., Margolis, Ben, Javier, Ronald T.
Publicado em 2005

The DREAM complex promotes gene body H2A.Z for target repression

Por Latorre, Isabel, Chesney, Michael A., Garrigues, Jacob M., Stempor, Przemyslaw, Appert, Alex, Francesconi, Mirko, Strome, Susan, Ahringer, Julie
Publicado no Genes Dev (2015)

Selective PDZ protein-dependent stimulation of phosphatidylinositol 3-kinase by the adenovirus E4-ORF1 oncoprotein

Por Frese, Kristopher K, Lee, Siu Sylvia, Thomas, Darby L, Latorre, Isabel J, Weiss, Robert S, Glaunsinger, Britt A, Javier, Ronald T
Publicado em 2003

Simultaneous Pathway Activity Inference and Gene Expression Analysis Using RNA Sequencing

Por O'Connell, Daniel J., Kolde, Raivo, Sooknah, Matthew, Graham, Daniel B., Sundberg, Thomas B., Latorre, Isabel, Mikkelsen, Tarjei S., Xavier, Ramnik J.
Publicado no Cell Syst (2016)

Oncogenic function for the Dlg1 mammalian homolog of the Drosophila discs-large tumor suppressor

Por Frese, Kristopher K, Latorre, Isabel J, Chung, Sang-Hyuk, Caruana, Georgina, Bernstein, Alan, Jones, Stephen N, Donehower, Lawrence A, Justice, Monica J, Garner, Craig C, Javier, Ronald T
Publicado em 2006

SELECTIVE INDUCTION OF HOMEOSTATIC TH17 CELLS IN THE MURINE INTESTINE BY CHOLERA TOXIN INTERACTING WITH THE MICROBIOTA

Por ZHAO, QING, HARBOUR, STACEY N., KOLDE, RAIVO, LATORRE, ISABEL J., TUN, HEIN M., SCHOEB, TRENTON R., TURNER, HENRIETTA, MOON, JAMES J., KHAFIPOUR, EHSAN, XAVIER, RAMNIK J., WEAVER, CASEY T., ELSON, CHARLES O.
Publicado no J Immunol (2017)

Discovery of a Small-Molecule Probe for V-ATPase Function

Por Aldrich, Leslie N., Kuo, Szu-Yu, Castoreno, Adam B., Goel, Gautam, Kuballa, Petric, Rees, Matthew G., Seashore-Ludlow, Brinton A., Cheah, Jaime H., Latorre, Isabel J., Schreiber, Stuart L., Shamji, Alykhan F., Xavier, Ramnik J.
Publicado no J Am Chem Soc (2015)

Small-molecule enhancers of autophagy modulate cellular disease phenotypes suggested by human genetics

Por Kuo, Szu-Yu, Castoreno, Adam B., Aldrich, Leslie N., Lassen, Kara G., Goel, Gautam, Dančík, Vlado, Kuballa, Petric, Latorre, Isabel, Conway, Kara L., Sarkar, Sovan, Maetzel, Dorothea, Jaenisch, Rudolf, Clemons, Paul A., Schreiber, Stuart L., Shamji, Alykhan F., Xavier, Ramnik J.
Publicado no Proc Natl Acad Sci U S A (2015)

Development of Chemical Probes for Investigation of Salt-Inducible Kinase Function In Vivo

Por Sundberg, Thomas B., Liang, Yanke, Wu, Huixian, Choi, Hwan Geun, Kim, Nam Doo, Sim, Taebo, Johannessen, Liv, Petrone, Adam, Khor, Bernard, Graham, Daniel B., Latorre, Isabel J., Phillips, Andrew J., Schreiber, Stuart L., Perez, Jose, Shamji, Alykhan F., Gray, Nathanael S., Xavier, Ramnik J.
Publicado no ACS Chem Biol (2016)

Broad chromosomal domains of histone modification patterns in C. elegans

Por Liu, Tao, Rechtsteiner, Andreas, Egelhofer, Thea A., Vielle, Anne, Latorre, Isabel, Cheung, Ming-Sin, Ercan, Sevinc, Ikegami, Kohta, Jensen, Morten, Kolasinska-Zwierz, Paulina, Rosenbaum, Heidi, Shin, Hyunjin, Taing, Scott, Takasaki, Teruaki, Iniguez, A. Leonardo, Desai, Arshad, Dernburg, Abby F., Kimura, Hiroshi, Lieb, Jason D., Ahringer, Julie, Strome, Susan, Liu, X. Shirley
Publicado em 2011

Small-molecule studies identify CDK8 as a regulator of IL-10 in myeloid cells

Por Johannessen, Liv, Sundberg, Thomas B, O’Connell, Daniel J, Kolde, Raivo, Berstler, James, Billings, Katelyn J, Khor, Bernard, Seashore-Ludlow, Brinton, Fassl, Anne, Russell, Caitlin N, Latorre, Isabel J, Jiang, Baishan, Graham, Daniel B, Perez, Jose R, Sicinski, Piotr, Phillips, Andrew J, Schreiber, Stuart L, Gray, Nathanael S, Shamji, Alykhan F, Xavier, Ramnik J
Publicado no Nat Chem Biol (2017)

An assessment of histone-modification antibody quality

Por Egelhofer, Thea A., Minoda, Aki, Klugman, Sarit, Lee, Kyungjoon, Kolasinska-Zwierz, Paulina, Alekseyenko, Artyom A., Cheung, Ming-Sin, Day, Daniel S., Gadel, Sarah, Gorchakov, Andrey A., Gu, Tingting, Kharchenko, Peter V., Kuan, Samantha, Latorre, Isabel, Linder-Basso, Daniela, Luu, Ying, Ngo, Queminh, Perry, Marc, Rechtsteiner, Andreas, Riddle, Nicole C., Schwartz, Yuri B., Shanower, Gregory A., Vielle, Anne, Ahringer, Julie, Elgin, Sarah C. R., Kuroda, Mitzi I., Pirrotta, Vincenzo, Ren, Bing, Strome, Susan, Park, Peter J., Karpen, Gary, Hawkins, R. David, Lieb, Jason D.
Publicado em 2010

Comparative analysis of metazoan chromatin organization

Por Ho, Joshua W. K., Jung, Youngsook L., Liu, Tao, Alver, Burak H., Lee, Soohyun, Ikegami, Kohta, Sohn, Kyung-Ah, Minoda, Aki, Tolstorukov, Michael Y., Appert, Alex, Parker, Stephen C. J., Gu, Tingting, Kundaje, Anshul, Riddle, Nicole C., Bishop, Eric, Egelhofer, Thea A., Hu, Sheng’en Shawn, Alekseyenko, Artyom A., Rechtsteiner, Andreas, Asker, Dalal, Belsky, Jason A., Bowman, Sarah K., Chen, Q. Brent, Chen, Ron A-J, Day, Daniel S., Dong, Yan, Dose, Andrea C., Duan, Xikun, Epstein, Charles B., Ercan, Sevinc, Feingold, Elise A., Ferrari, Francesco, Garrigues, Jacob M., Gehlenborg, Nils, Good, Peter J., Haseley, Psalm, He, Daniel, Herrmann, Moritz, Hoffman, Michael M., Jeffers, Tess E., Kharchenko, Peter V., Kolasinska-Zwierz, Paulina, Kotwaliwale, Chitra V., Kumar, Nischay, Langley, Sasha A., Larschan, Erica N., Latorre, Isabel, Libbrecht, Maxwell W., Lin, Xueqiu, Park, Richard, Pazin, Michael J., Pham, Hoang N., Plachetka, Annette, Qin, Bo, Schwartz, Yuri B., Shoresh, Noam, Stempor, Przemyslaw, Vielle, Anne, Wang, Chengyang, Whittle, Christina M., Xue, Huiling, Kingston, Robert E., Kim, Ju Han, Bernstein, Bradley E., Dernburg, Abby F., Pirrotta, Vincenzo, Kuroda, Mitzi I., Noble, William S., Tullius, Thomas D., Kellis, Manolis, MacAlpine, David M., Strome, Susan, Elgin, Sarah C. R., Liu, Xiaole Shirley, Lieb, Jason D., Ahringer, Julie, Karpen, Gary H., Park, Peter J.
Publicado no Nature (2014)

Integrative Analysis of the Caenorhabditis elegans Genome by the modENCODE Project

Por Gerstein, Mark B., Lu, Zhi John, Van Nostrand, Eric L., Cheng, Chao, Arshinoff, Bradley I., Liu, Tao, Yip, Kevin Y., Robilotto, Rebecca, Rechtsteiner, Andreas, Ikegami, Kohta, Alves, Pedro, Chateigner, Aurelien, Perry, Marc, Morris, Mitzi, Auerbach, Raymond K., Feng, Xin, Leng, Jing, Vielle, Anne, Niu, Wei, Rhrissorrakrai, Kahn, Agarwal, Ashish, Alexander, Roger P., Barber, Galt, Brdlik, Cathleen M., Brennan, Jennifer, Brouillet, Jeremy Jean, Carr, Adrian, Cheung, Ming-Sin, Clawson, Hiram, Contrino, Sergio, Dannenberg, Luke O., Dernburg, Abby F., Desai, Arshad, Dick, Lindsay, Dosé, Andréa C., Du, Jiang, Egelhofer, Thea, Ercan, Sevinc, Euskirchen, Ghia, Ewing, Brent, Feingold, Elise A., Gassmann, Reto, Good, Peter J., Green, Phil, Gullier, Francois, Gutwein, Michelle, Guyer, Mark S., Habegger, Lukas, Han, Ting, Henikoff, Jorja G., Henz, Stefan R., Hinrichs, Angie, Holster, Heather, Hyman, Tony, Iniguez, A. Leo, Janette, Judith, Jensen, Morten, Kato, Masaomi, Kent, W. James, Kephart, Ellen, Khivansara, Vishal, Khurana, Ekta, Kim, John K., Kolasinska-Zwierz, Paulina, Lai, Eric C., Latorre, Isabel, Leahey, Amber, Lewis, Suzanna, Lloyd, Paul, Lochovsky, Lucas, Lowdon, Rebecca F., Lubling, Yaniv, Lyne, Rachel, MacCoss, Michael, Mackowiak, Sebastian D., Mangone, Marco, McKay, Sheldon, Mecenas, Desirea, Merrihew, Gennifer, Miller, David M., Muroyama, Andrew, Murray, John I., Ooi, Siew-Loon, Pham, Hoang, Phippen, Taryn, Preston, Elicia A., Rajewsky, Nikolaus, Rätsch, Gunnar, Rosenbaum, Heidi, Rozowsky, Joel, Rutherford, Kim, Ruzanov, Peter, Sarov, Mihail, Sasidharan, Rajkumar, Sboner, Andrea, Scheid, Paul, Segal, Eran, Shin, Hyunjin, Shou, Chong, Slack, Frank J., Slightam, Cindie, Smith, Richard, Spencer, William C., Stinson, E. O., Taing, Scott, Takasaki, Teruaki, Vafeados, Dionne, Voronina, Ksenia, Wang, Guilin, Washington, Nicole L., Whittle, Christina M., Wu, Beijing, Yan, Koon-Kiu, Zeller, Georg, Zha, Zheng, Zhong, Mei, Zhou, Xingliang, Ahringer, Julie, Strome, Susan, Gunsalus, Kristin C., Micklem, Gos, Liu, X. Shirley, Reinke, Valerie, Kim, Stuart K., Hillier, LaDeana W., Henikoff, Steven, Piano, Fabio, Snyder, Michael, Stein, Lincoln, Lieb, Jason D., Waterston, Robert H.
Publicado em 2010