Specific microRNAs Regulate Heat Stress Responses in Caenorhabditis elegans

Por Nehammer, Camilla, Podolska, Agnieszka, Mackowiak, Sebastian D., Kagias, Konstantinos, Pocock, Roger
Publicado no Sci Rep (2015)

miRDeep2 accurately identifies known and hundreds of novel microRNA genes in seven animal clades

Por Friedländer, Marc R., Mackowiak, Sebastian D., Li, Na, Chen, Wei, Rajewsky, Nikolaus
Publicado em 2012

doRiNA: a database of RNA interactions in post-transcriptional regulation

Por Anders, Gerd, Mackowiak, Sebastian D., Jens, Marvin, Maaskola, Jonas, Kuntzagk, Andreas, Rajewsky, Nikolaus, Landthaler, Markus, Dieterich, Christoph
Publicado em 2012

Extensive identification and analysis of conserved small ORFs in animals

Por Mackowiak, Sebastian D., Zauber, Henrik, Bielow, Chris, Thiel, Denise, Kutz, Kamila, Calviello, Lorenzo, Mastrobuoni, Guido, Rajewsky, Nikolaus, Kempa, Stefan, Selbach, Matthias, Obermayer, Benedikt
Publicado no Genome Biol (2015)

Global profiling of miRNAs and the hairpin precursors: insights into miRNA processing and novel miRNA discovery

Por Li, Na, You, Xintian, Chen, Tao, Mackowiak, Sebastian D., Friedländer, Marc R., Weigt, Martina, Du, Hang, Gogol-Döring, Andreas, Chang, Zisong, Dieterich, Christoph, Hu, Yuhui, Chen, Wei
Publicado em 2013

Identification of small ORFs in vertebrates using ribosome footprinting and evolutionary conservation

Por Bazzini, Ariel A, Johnstone, Timothy G, Christiano, Romain, Mackowiak, Sebastian D, Obermayer, Benedikt, Fleming, Elizabeth S, Vejnar, Charles E, Lee, Miler T, Rajewsky, Nikolaus, Walther, Tobias C, Giraldez, Antonio J
Publicado em 2014

De novo assembly and validation of planaria transcriptome by massive parallel sequencing and shotgun proteomics

Por Adamidi, Catherine, Wang, Yongbo, Gruen, Dominic, Mastrobuoni, Guido, You, Xintian, Tolle, Dominic, Dodt, Matthias, Mackowiak, Sebastian D., Gogol-Doering, Andreas, Oenal, Pinar, Rybak, Agnieszka, Ross, Eric, Alvarado, Alejandro Sánchez, Kempa, Stefan, Dieterich, Christoph, Rajewsky, Nikolaus, Chen, Wei
Publicado em 2011

The Landscape of C. elegans 3′UTRs

Por Mangone, Marco, Manoharan, Arun Prasad, Thierry-Mieg, Danielle, Thierry-Mieg, Jean, Han, Ting, Mackowiak, Sebastian D., Mis, Emily, Zegar, Charles, Gutwein, Michelle R., Khivansara, Vishal, Attie, Oliver, Chen, Kevin, Salehi-Ashtiani, Kourosh, Vidal, Marc, Harkins, Timothy T., Bouffard, Pascal, Suzuki, Yutaka, Sugano, Sumio, Kohara, Yuji, Rajewsky, Nikolaus, Piano, Fabio, Gunsalus, Kristin C., Kim, John K.
Publicado em 2010

Integrative Analysis of the Caenorhabditis elegans Genome by the modENCODE Project

Por Gerstein, Mark B., Lu, Zhi John, Van Nostrand, Eric L., Cheng, Chao, Arshinoff, Bradley I., Liu, Tao, Yip, Kevin Y., Robilotto, Rebecca, Rechtsteiner, Andreas, Ikegami, Kohta, Alves, Pedro, Chateigner, Aurelien, Perry, Marc, Morris, Mitzi, Auerbach, Raymond K., Feng, Xin, Leng, Jing, Vielle, Anne, Niu, Wei, Rhrissorrakrai, Kahn, Agarwal, Ashish, Alexander, Roger P., Barber, Galt, Brdlik, Cathleen M., Brennan, Jennifer, Brouillet, Jeremy Jean, Carr, Adrian, Cheung, Ming-Sin, Clawson, Hiram, Contrino, Sergio, Dannenberg, Luke O., Dernburg, Abby F., Desai, Arshad, Dick, Lindsay, Dosé, Andréa C., Du, Jiang, Egelhofer, Thea, Ercan, Sevinc, Euskirchen, Ghia, Ewing, Brent, Feingold, Elise A., Gassmann, Reto, Good, Peter J., Green, Phil, Gullier, Francois, Gutwein, Michelle, Guyer, Mark S., Habegger, Lukas, Han, Ting, Henikoff, Jorja G., Henz, Stefan R., Hinrichs, Angie, Holster, Heather, Hyman, Tony, Iniguez, A. Leo, Janette, Judith, Jensen, Morten, Kato, Masaomi, Kent, W. James, Kephart, Ellen, Khivansara, Vishal, Khurana, Ekta, Kim, John K., Kolasinska-Zwierz, Paulina, Lai, Eric C., Latorre, Isabel, Leahey, Amber, Lewis, Suzanna, Lloyd, Paul, Lochovsky, Lucas, Lowdon, Rebecca F., Lubling, Yaniv, Lyne, Rachel, MacCoss, Michael, Mackowiak, Sebastian D., Mangone, Marco, McKay, Sheldon, Mecenas, Desirea, Merrihew, Gennifer, Miller, David M., Muroyama, Andrew, Murray, John I., Ooi, Siew-Loon, Pham, Hoang, Phippen, Taryn, Preston, Elicia A., Rajewsky, Nikolaus, Rätsch, Gunnar, Rosenbaum, Heidi, Rozowsky, Joel, Rutherford, Kim, Ruzanov, Peter, Sarov, Mihail, Sasidharan, Rajkumar, Sboner, Andrea, Scheid, Paul, Segal, Eran, Shin, Hyunjin, Shou, Chong, Slack, Frank J., Slightam, Cindie, Smith, Richard, Spencer, William C., Stinson, E. O., Taing, Scott, Takasaki, Teruaki, Vafeados, Dionne, Voronina, Ksenia, Wang, Guilin, Washington, Nicole L., Whittle, Christina M., Wu, Beijing, Yan, Koon-Kiu, Zeller, Georg, Zha, Zheng, Zhong, Mei, Zhou, Xingliang, Ahringer, Julie, Strome, Susan, Gunsalus, Kristin C., Micklem, Gos, Liu, X. Shirley, Reinke, Valerie, Kim, Stuart K., Hillier, LaDeana W., Henikoff, Steven, Piano, Fabio, Snyder, Michael, Stein, Lincoln, Lieb, Jason D., Waterston, Robert H.
Publicado em 2010