Combining next-generation pyrosequencing with microarray for large scale expression analysis in non-model species

von Bellin, Diana, Ferrarini, Alberto, Chimento, Antonio, Kaiser, Olaf, Levenkova, Natasha, Bouffard, Pascal, Delledonne, Massimo
Veröffentlicht 2009

26G endo-siRNAs regulate spermatogenic and zygotic gene expression in Caenorhabditis elegans

von Han, Ting, Manoharan, Arun Prasad, Harkins, Tim T., Bouffard, Pascal, Fitzpatrick, Colin, Chu, Diana S., Thierry-Mieg, Danielle, Thierry-Mieg, Jean, Kim, John K.
Veröffentlicht 2009

Analysis of TSC Cortical Tubers by Deep Sequencing of TSC1, TSC2 and KRAS Demonstrates that Small Second‐Hit Mutations in these Genes are Rare Events

von Qin, Wei, Chan, Jennifer A., Vinters, Harry V., Mathern, Gary W., Franz, David N., Taillon, Bruce E., Bouffard, Pascal, Kwiatkowski, David J.
Veröffentlicht 2010

Ultra deep sequencing detects a low rate of mosaic mutations in Tuberous Sclerosis Complex

von Qin, Wei, Kozlowski, Piotr, Taillon, Bruce E., Bouffard, Pascal, Holmes, Alison J., Janne, Pasi, Camposano, Susana, Thiele, Elizabeth, Franz, David, Kwiatkowski, David J.
Veröffentlicht 2010

Transcriptome Profiling of the Intoxication Response of Tenebrio molitor Larvae to Bacillus thuringiensis Cry3Aa Protoxin

von Oppert, Brenda, Dowd, Scot E., Bouffard, Pascal, Li, Lewyn, Conesa, Ana, Lorenzen, Marcé D., Toutges, Michelle, Marshall, Jeremy, Huestis, Diana L., Fabrick, Jeff, Oppert, Cris, Jurat-Fuentes, Juan Luis
Veröffentlicht 2012

Assessing the feasibility of GS FLX Pyrosequencing for sequencing the Atlantic salmon genome

von Quinn, Nicole L, Levenkova, Natasha, Chow, William, Bouffard, Pascal, Boroevich, Keith A, Knight, James R, Jarvie, Thomas P, Lubieniecki, Krzysztof P, Desany, Brian A, Koop, Ben F, Harkins, Timothy T, Davidson, William S
Veröffentlicht 2008

MHC genotyping with massively parallel pyrosequencing

von Wiseman, Roger W., Karl, Julie A., Bimber, Benjamin N., O’Leary, Claire E., Lank, Simon M., Tuscher, Jennifer J., Detmer, Ann M., Bouffard, Pascal, Levenkova, Natalya, Turcotte, Cynthia L., Szekeres, Edward, Wright, Chris, Harkins, Timothy, O’Connor, David H.
Veröffentlicht 2009

Complete mitochondrial genome phylogeographic analysis of killer whales (Orcinus orca) indicates multiple species

von Morin, Phillip A., Archer, Frederick I., Foote, Andrew D., Vilstrup, Julia, Allen, Eric E., Wade, Paul, Durban, John, Parsons, Kim, Pitman, Robert, Li, Lewyn, Bouffard, Pascal, Abel Nielsen, Sandra C., Rasmussen, Morten, Willerslev, Eske, Gilbert, M. Thomas P., Harkins, Timothy
Veröffentlicht 2010

Comprehensive resequence analysis of a 136 kb region of human chromosome 8q24 associated with prostate and colon cancers

von Yeager, Meredith, Xiao, Nianqing, Hayes, Richard B., Bouffard, Pascal, Desany, Brian, Burdett, Laura, Orr, Nick, Matthews, Casey, Qi, Liqun, Crenshaw, Andrew, Markovic, Zdenek, Fredrikson, Karin M., Jacobs, Kevin B., Amundadottir, Laufey, Jarvie, Thomas P., Hunter, David J., Hoover, Robert, Thomas, Gilles, Harkins, Timothy T., Chanock, Stephen J.
Veröffentlicht 2008

Transcriptome sequencing of malignant pleural mesothelioma tumors

von Sugarbaker, David J., Richards, William G., Gordon, Gavin J., Dong, Lingsheng, De Rienzo, Assunta, Maulik, Gautam, Glickman, Jonathan N., Chirieac, Lucian R., Hartman, Mor-Li, Taillon, Bruce E., Du, Lei, Bouffard, Pascal, Kingsmore, Stephen F., Miller, Neil A., Farmer, Andrew D., Jensen, Roderick V., Gullans, Steven R., Bueno, Raphael
Veröffentlicht 2008

An Insect Herbivore Microbiome with High Plant Biomass-Degrading Capacity

von Suen, Garret, Scott, Jarrod J., Aylward, Frank O., Adams, Sandra M., Tringe, Susannah G., Pinto-Tomás, Adrián A., Foster, Clifton E., Pauly, Markus, Weimer, Paul J., Barry, Kerrie W., Goodwin, Lynne A., Bouffard, Pascal, Li, Lewyn, Osterberger, Jolene, Harkins, Timothy T., Slater, Steven C., Donohue, Timothy J., Currie, Cameron R.
Veröffentlicht 2010

The Landscape of C. elegans 3′UTRs

von Mangone, Marco, Manoharan, Arun Prasad, Thierry-Mieg, Danielle, Thierry-Mieg, Jean, Han, Ting, Mackowiak, Sebastian D., Mis, Emily, Zegar, Charles, Gutwein, Michelle R., Khivansara, Vishal, Attie, Oliver, Chen, Kevin, Salehi-Ashtiani, Kourosh, Vidal, Marc, Harkins, Timothy T., Bouffard, Pascal, Suzuki, Yutaka, Sugano, Sumio, Kohara, Yuji, Rajewsky, Nikolaus, Piano, Fabio, Gunsalus, Kristin C., Kim, John K.
Veröffentlicht 2010

Studies in humanized mice and convalescent humans yield a SARS-CoV-2 antibody cocktail

von Hansen, Johanna, Baum, Alina, Pascal, Kristen E., Russo, Vincenzo, Giordano, Stephanie, Wloga, Elzbieta, Fulton, Benjamin O., Yan, Ying, Koon, Katrina, Patel, Krunal, Chung, Kyung Min, Hermann, Aynur, Ullman, Erica, Cruz, Jonathan, Rafique, Ashique, Huang, Tammy, Fairhurst, Jeanette, Libertiny, Christen, Malbec, Marine, Lee, Wen-yi, Welsh, Richard, Farr, Glen, Pennington, Seth, Deshpande, Dipali, Cheng, Jemmie, Watty, Anke, Bouffard, Pascal, Babb, Robert, Levenkova, Natasha, Chen, Calvin, Zhang, Bojie, Romero Hernandez, Annabel, Saotome, Kei, Zhou, Yi, Franklin, Matthew, Sivapalasingam, Sumathi, Lye, David Chien, Weston, Stuart, Logue, James, Haupt, Robert, Frieman, Matthew, Chen, Gang, Olson, William, Murphy, Andrew J., Stahl, Neil, Yancopoulos, George D., Kyratsous, Christos A.
Veröffentlicht in Science (2020)

The Genome Sequence of the Leaf-Cutter Ant Atta cephalotes Reveals Insights into Its Obligate Symbiotic Lifestyle

von Suen, Garret, Teiling, Clotilde, Li, Lewyn, Holt, Carson, Abouheif, Ehab, Bornberg-Bauer, Erich, Bouffard, Pascal, Caldera, Eric J., Cash, Elizabeth, Cavanaugh, Amy, Denas, Olgert, Elhaik, Eran, Favé, Marie-Julie, Gadau, Jürgen, Gibson, Joshua D., Graur, Dan, Grubbs, Kirk J., Hagen, Darren E., Harkins, Timothy T., Helmkampf, Martin, Hu, Hao, Johnson, Brian R., Kim, Jay, Marsh, Sarah E., Moeller, Joseph A., Muñoz-Torres, Mónica C., Murphy, Marguerite C., Naughton, Meredith C., Nigam, Surabhi, Overson, Rick, Rajakumar, Rajendhran, Reese, Justin T., Scott, Jarrod J., Smith, Chris R., Tao, Shu, Tsutsui, Neil D., Viljakainen, Lumi, Wissler, Lothar, Yandell, Mark D., Zimmer, Fabian, Taylor, James, Slater, Steven C., Clifton, Sandra W., Warren, Wesley C., Elsik, Christine G., Smith, Christopher D., Weinstock, George M., Gerardo, Nicole M., Currie, Cameron R.
Veröffentlicht 2011

Complete Khoisan and Bantu genomes from southern Africa

von Schuster, Stephan C., Miller, Webb, Ratan, Aakrosh, Tomsho, Lynn P., Giardine, Belinda, Kasson, Lindsay R., Harris, Robert S., Petersen, Desiree C., Zhao, Fangqing, Qi, Ji, Alkan, Can, Kidd, Jeffrey M., Sun, Yazhou, Drautz, Daniela I., Bouffard, Pascal, Muzny, Donna M., Reid, Jeffrey G., Nazareth, Lynne V., Wang, Qingyu, Burhans, Richard, Riemer, Cathy, Wittekindt, Nicola E., Moorjani, Priya, Tindall, Elizabeth A., Danko, Charles G., Teo, Wee Siang, Buboltz, Anne M., Zhang, Zhenhai, Ma, Qianyi, Oosthuysen, Arno, Steenkamp, Abraham W., Oostuisen, Hermann, Venter, Philippus, Gajewski, John, Zhang, Yu, Pugh, B. Franklin, Makova, Kateryna D., Nekrutenko, Anton, Mardis, Elaine R., Patterson, Nick, Pringle, Tom H., Chiaromonte, Francesca, Mullikin, James C., Eichler, Evan E., Hardison, Ross C., Gibbs, Richard A., Harkins, Timothy T., Hayes, Vanessa M.
Veröffentlicht 2010

Multi-Platform Next-Generation Sequencing of the Domestic Turkey (Meleagris gallopavo): Genome Assembly and Analysis

von Dalloul, Rami A., Long, Julie A., Zimin, Aleksey V., Aslam, Luqman, Beal, Kathryn, Ann Blomberg, Le, Bouffard, Pascal, Burt, David W., Crasta, Oswald, Crooijmans, Richard P. M. A., Cooper, Kristal, Coulombe, Roger A., De, Supriyo, Delany, Mary E., Dodgson, Jerry B., Dong, Jennifer J., Evans, Clive, Frederickson, Karin M., Flicek, Paul, Florea, Liliana, Folkerts, Otto, Groenen, Martien A. M., Harkins, Tim T., Herrero, Javier, Hoffmann, Steve, Megens, Hendrik-Jan, Jiang, Andrew, de Jong, Pieter, Kaiser, Pete, Kim, Heebal, Kim, Kyu-Won, Kim, Sungwon, Langenberger, David, Lee, Mi-Kyung, Lee, Taeheon, Mane, Shrinivasrao, Marcais, Guillaume, Marz, Manja, McElroy, Audrey P., Modise, Thero, Nefedov, Mikhail, Notredame, Cédric, Paton, Ian R., Payne, William S., Pertea, Geo, Prickett, Dennis, Puiu, Daniela, Qioa, Dan, Raineri, Emanuele, Ruffier, Magali, Salzberg, Steven L., Schatz, Michael C., Scheuring, Chantel, Schmidt, Carl J., Schroeder, Steven, Searle, Stephen M. J., Smith, Edward J., Smith, Jacqueline, Sonstegard, Tad S., Stadler, Peter F., Tafer, Hakim, Tu, Zhijian (Jake), Van Tassell, Curtis P., Vilella, Albert J., Williams, Kelly P., Yorke, James A., Zhang, Liqing, Zhang, Hong-Bin, Zhang, Xiaojun, Zhang, Yang, Reed, Kent M.
Veröffentlicht 2010