gEVAL — a web-based browser for evaluating genome assemblies

著者: Chow, William, Brugger, Kim, Caccamo, Mario, Sealy, Ian, Torrance, James, Howe, Kerstin
出版年 Bioinformatics (2016)

Significantly improving the quality of genome assemblies through curation

著者: Howe, Kerstin, Chow, William, Collins, Joanna, Pelan, Sarah, Pointon, Damon-Lee, Sims, Ying, Torrance, James, Tracey, Alan, Wood, Jonathan
出版年 Gigascience (2021)

Decrease in JAK2(V617F) allele burden is not a prerequisite to clinical response in patients with polycythemia vera

著者: Kuriakose, Emil, Vandris, Katherine, Wang, Y. Lynn, Chow, William, Jones, Amy V., Christos, Paul, Cross, Nicholas C.P., Silver, Richard T.
出版事項 2012

Genomic Organization and Evolution of the Vomeronasal Type 2 Receptor-Like (OlfC) Gene Clusters in Atlantic Salmon, Salmo salar

著者: Johnstone, Kimberley A., Ciborowski, Kate L., Lubieniecki, Krzysztof P., Chow, William, Phillips, Ruth B., Koop, Ben F., Jordan, William C., Davidson, William S.
出版事項 2009

Genomic organization and evolution of the Atlantic salmon hemoglobin repertoire

著者: Quinn, Nicole L, Boroevich, Keith A, Lubieniecki, Krzysztof P, Chow, William, Davidson, Evelyn A, Phillips, Ruth B, Koop, Ben F, Davidson, William S
出版事項 2010

Birth, expansion, and death of VCY-containing palindromes on the human Y chromosome

著者: Shi, Wentao, Massaia, Andrea, Louzada, Sandra, Handsaker, Juliet, Chow, William, McCarthy, Shane, Collins, Joanna, Hallast, Pille, Howe, Kerstin, Church, Deanna M., Yang, Fengtang, Xue, Yali, Tyler-Smith, Chris
出版年 Genome Biol (2019)

Assessing the feasibility of GS FLX Pyrosequencing for sequencing the Atlantic salmon genome

著者: Quinn, Nicole L, Levenkova, Natasha, Chow, William, Bouffard, Pascal, Boroevich, Keith A, Knight, James R, Jarvie, Thomas P, Lubieniecki, Krzysztof P, Desany, Brian A, Koop, Ben F, Harkins, Timothy T, Davidson, William S
出版事項 2008

The genome sequence of the channel bull blenny, Cottoperca gobio (Günther, 1861)

著者: Bista, Iliana, McCarthy, Shane A., Wood, Jonathan, Ning, Zemin, Detrich III, H. William, Desvignes, Thomas, Postlethwait, John, Chow, William, Howe, Kerstin, Torrance, James, Smith, Michelle, Oliver, Karen, Miska, Eric A., Durbin, Richard
出版年 Wellcome Open Res (2020)

Non-selective beta blockers inhibit angiosarcoma cell viability and increase progression free- and overall-survival in patients diagnosed with metastatic angiosarcoma

著者: Amaya, Clarissa N., Perkins, Mariah, Belmont, Andres, Herrera, Connie, Nasrazadani, Arezo, Vargas, Alejandro, Khayou, Thuraieh, Montoya, Alexa, Ballou, Yessenia, Galvan, Dana, Rivas, Alexandria, Rains, Steven, Patel, Luv, Ortega, Vanessa, Lopez, Christopher, Chow, William, Dickerson, Erin B., Bryan, Brad A.
出版年 Oncoscience (2018)

The evolution of two transmissible cancers in Tasmanian devils

著者: Stammnitz, Maximilian R., Gori, Kevin, Kwon, Young Mi, Harry, Ed, Martin, Fergal J., Billis, Konstantinos, Cheng, Yuanyuan, Baez-Ortega, Adrian, Chow, William, Comte, Sebastien, Eggertsson, Hannes, Fox, Samantha, Hamede, Rodrigo, Jones, Menna, Lazenby, Billie, Peck, Sarah, Pye, Ruth, Quail, Michael A., Swift, Kate, Wang, Jinhong, Wood, Jonathan, Howe, Kerstin, Stratton, Michael R., Ning, Zemin, Murchison, Elizabeth P.
出版年 Science (2023)

Evolutionary and biomedical insights from a marmoset diploid genome assembly

著者: Yang, Chentao, Zhou, Yang, Marcus, Stephanie, Formenti, Giulio, Bergeron, Lucie A., Song, Zhenzhen, Bi, Xupeng, Bergman, Juraj, Rousselle, Marjolaine Marie C., Zhou, Chengran, Zhou, Long, Deng, Yuan, Fang, Miaoquan, Xie, Duo, Zhu, Yuanzhen, Tan, Shangjin, Mountcastle, Jacquelyn, Haase, Bettina, Balacco, Jennifer, Wood, Jonathan, Chow, William, Rhie, Arang, Pippel, Martin, Fabiszak, Margaret M., Koren, Sergey, Fedrigo, Olivier, Freiwald, Winrich A., Howe, Kerstin, Yang, Huanming, Phillippy, Adam M., Schierup, Mikkel Heide, Jarvis, Erich D., Zhang, Guojie
出版年 Nature (2021)

A New Chicken Genome Assembly Provides Insight into Avian Genome Structure

著者: Warren, Wesley C., Hillier, LaDeana W., Tomlinson, Chad, Minx, Patrick, Kremitzki, Milinn, Graves, Tina, Markovic, Chris, Bouk, Nathan, Pruitt, Kim D., Thibaud-Nissen, Francoise, Schneider, Valerie, Mansour, Tamer A., Brown, C. Titus, Zimin, Aleksey, Hawken, Rachel, Abrahamsen, Mitch, Pyrkosz, Alexis B., Morisson, Mireille, Fillon, Valerie, Vignal, Alain, Chow, William, Howe, Kerstin, Fulton, Janet E., Miller, Marcia M., Lovell, Peter, Mello, Claudio V., Wirthlin, Morgan, Mason, Andrew S., Kuo, Richard, Burt, David W., Dodgson, Jerry B., Cheng, Hans H.
出版年 G3 (Bethesda) (2016)

The pig X and Y Chromosomes: structure, sequence, and evolution

著者: Skinner, Benjamin M., Sargent, Carole A., Churcher, Carol, Hunt, Toby, Herrero, Javier, Loveland, Jane E., Dunn, Matt, Louzada, Sandra, Fu, Beiyuan, Chow, William, Gilbert, James, Austin-Guest, Siobhan, Beal, Kathryn, Carvalho-Silva, Denise, Cheng, William, Gordon, Daria, Grafham, Darren, Hardy, Matt, Harley, Jo, Hauser, Heidi, Howden, Philip, Howe, Kerstin, Lachani, Kim, Ellis, Peter J.I., Kelly, Daniel, Kerry, Giselle, Kerwin, James, Ng, Bee Ling, Threadgold, Glen, Wileman, Thomas, Wood, Jonathan M.D., Yang, Fengtang, Harrow, Jen, Affara, Nabeel A., Tyler-Smith, Chris
出版年 Genome Res (2016)

Reference genome and demographic history of the most endangered marine mammal, the vaquita

著者: Morin, Phillip A., Archer, Frederick I., Avila, Catherine D., Balacco, Jennifer R., Bukhman, Yury V., Chow, William, Fedrigo, Olivier, Formenti, Giulio, Fronczek, Julie A., Fungtammasan, Arkarachai, Gulland, Frances M. D., Haase, Bettina, Peter Heide‐Jorgensen, Mads, Houck, Marlys L., Howe, Kerstin, Misuraca, Ann C., Mountcastle, Jacquelyn, Musser, Whitney, Paez, Sadye, Pelan, Sarah, Phillippy, Adam, Rhie, Arang, Robinson, Jacqueline, Rojas‐Bracho, Lorenzo, Rowles, Teri K., Ryder, Oliver A., Smith, Cynthia R., Stevenson, Sacha, Taylor, Barbara L., Teilmann, Jonas, Torrance, James, Wells, Randall S., Westgate, Andrew J., Jarvis, Erich D.
出版年 Mol Ecol Resour (2020)

Evaluation of GRCh38 and de novo haploid genome assemblies demonstrates the enduring quality of the reference assembly

著者: Schneider, Valerie A., Graves-Lindsay, Tina, Howe, Kerstin, Bouk, Nathan, Chen, Hsiu-Chuan, Kitts, Paul A., Murphy, Terence D., Pruitt, Kim D., Thibaud-Nissen, Françoise, Albracht, Derek, Fulton, Robert S., Kremitzki, Milinn, Magrini, Vincent, Markovic, Chris, McGrath, Sean, Steinberg, Karyn Meltz, Auger, Kate, Chow, William, Collins, Joanna, Harden, Glenn, Hubbard, Timothy, Pelan, Sarah, Simpson, Jared T., Threadgold, Glen, Torrance, James, Wood, Jonathan M., Clarke, Laura, Koren, Sergey, Boitano, Matthew, Peluso, Paul, Li, Heng, Chin, Chen-Shan, Phillippy, Adam M., Durbin, Richard, Wilson, Richard K., Flicek, Paul, Eichler, Evan E., Church, Deanna M.
出版年 Genome Res (2017)

Repeat associated mechanisms of genome evolution and function revealed by the Mus caroli and Mus pahari genomes

著者: Thybert, David, Roller, Maša, Navarro, Fábio C.P., Fiddes, Ian, Streeter, Ian, Feig, Christine, Martin-Galvez, David, Kolmogorov, Mikhail, Janoušek, Václav, Akanni, Wasiu, Aken, Bronwen, Aldridge, Sarah, Chakrapani, Varshith, Chow, William, Clarke, Laura, Cummins, Carla, Doran, Anthony, Dunn, Matthew, Goodstadt, Leo, Howe, Kerstin, Howell, Matthew, Josselin, Ambre-Aurore, Karn, Robert C., Laukaitis, Christina M., Jingtao, Lilue, Martin, Fergal, Muffato, Matthieu, Nachtweide, Stefanie, Quail, Michael A., Sisu, Cristina, Stanke, Mario, Stefflova, Klara, Van Oosterhout, Cock, Veyrunes, Frederic, Ward, Ben, Yang, Fengtang, Yazdanifar, Golbahar, Zadissa, Amonida, Adams, David J., Brazma, Alvis, Gerstein, Mark, Paten, Benedict, Pham, Son, Keane, Thomas M., Odom, Duncan T., Flicek, Paul
出版年 Genome Res (2018)

An improved pig reference genome sequence to enable pig genetics and genomics research

著者: Warr, Amanda, Affara, Nabeel, Aken, Bronwen, Beiki, Hamid, Bickhart, Derek M, Billis, Konstantinos, Chow, William, Eory, Lel, Finlayson, Heather A, Flicek, Paul, Girón, Carlos G, Griffin, Darren K, Hall, Richard, Hannum, Greg, Hourlier, Thibaut, Howe, Kerstin, Hume, David A, Izuogu, Osagie, Kim, Kristi, Koren, Sergey, Liu, Haibou, Manchanda, Nancy, Martin, Fergal J, Nonneman, Dan J, O'Connor, Rebecca E, Phillippy, Adam M, Rohrer, Gary A, Rosen, Benjamin D, Rund, Laurie A, Sargent, Carole A, Schook, Lawrence B, Schroeder, Steven G, Schwartz, Ariel S, Skinner, Ben M, Talbot, Richard, Tseng, Elizabeth, Tuggle, Christopher K, Watson, Mick, Smith, Timothy P L, Archibald, Alan L
出版年 Gigascience (2020)

Sixteen diverse laboratory mouse reference genomes define strain specific haplotypes and novel functional loci

著者: Lilue, Jingtao, Doran, Anthony G., Fiddes, Ian T., Abrudan, Monica, Armstrong, Joel, Bennett, Ruth, Chow, William, Collins, Joanna, Collins, Stephan, Czechanski, Anne, Danecek, Petr, Diekhans, Mark, Dolle, Dirk-Dominik, Dunn, Matt, Durbin, Richard, Earl, Dent, Ferguson-Smith, Anne, Flicek, Paul, Flint, Jonathan, Frankish, Adam, Fu, Beiyuan, Gerstein, Mark, Gilbert, James, Goodstadt, Leo, Harrow, Jennifer, Howe, Kerstin, Ibarra-Soria, Ximena, Kolmogorov, Mikhail, Lelliott, Chris, Logan, Darren W., Loveland, Jane, Mathews, Clayton E., Mott, Richard, Muir, Paul, Nachtweide, Stefanie, Navarro, Fabio C.P., Odom, Duncan T., Park, Naomi, Pelan, Sarah, Pham, Son K, Quail, Mike, Reinholdt, Laura, Romoth, Lars, Shirley, Lesley, Sisu, Cristina, Sjoberg-Herrera, Marcela, Stanke, Mario, Steward, Charles, Thomas, Mark, Threadgold, Glen, Thybert, David, Torrance, James, Wong, Kim, Wood, Jonathan, Yalcin, Binnaz, Yang, Fengtang, Adams, David J., Paten, Benedict, Keane, Thomas M.
出版年 Nat Genet (2018)

Telomere-to-telomere assembly of a complete human X chromosome

著者: Miga, Karen H., Koren, Sergey, Rhie, Arang, Vollger, Mitchell R., Gershman, Ariel, Bzikadze, Andrey, Brooks, Shelise, Howe, Edmund, Porubsky, David, Logsdon, Glennis A., Schneider, Valerie A., Potapova, Tamara, Wood, Jonathan, Chow, William, Armstrong, Joel, Fredrickson, Jeanne, Pak, Evgenia, Tigyi, Kristof, Kremitzki, Milinn, Markovic, Christopher, Maduro, Valerie, Dutra, Amalia, Bouffard, Gerard G., Chang, Alexander M., Hansen, Nancy F., Wilfert, Amy B., Thibaud-Nissen, Françoise, Schmitt, Anthony D., Belton, Jon-Matthew, Selvaraj, Siddarth, Dennis, Megan Y., Soto, Daniela C., Sahasrabudhe, Ruta, Kaya, Gulhan, Quick, Josh, Loman, Nicholas J., Holmes, Nadine, Loose, Matthew, Surti, Urvashi, Risques, Rosa ana, Graves Lindsay, Tina A., Fulton, Robert, Hall, Ira, Paten, Benedict, Howe, Kerstin, Timp, Winston, Young, Alice, Mullikin, James C., Pevzner, Pavel A., Gerton, Jennifer L., Sullivan, Beth A., Eichler, Evan E., Phillippy, Adam M.
出版年 Nature (2020)

Towards complete and error-free genome assemblies of all vertebrate species

著者: Rhie, Arang, McCarthy, Shane A., Fedrigo, Olivier, Damas, Joana, Formenti, Giulio, Koren, Sergey, Uliano-Silva, Marcela, Chow, William, Fungtammasan, Arkarachai, Kim, Juwan, Lee, Chul, Ko, Byung June, Chaisson, Mark, Gedman, Gregory L., Cantin, Lindsey J., Thibaud-Nissen, Francoise, Haggerty, Leanne, Bista, Iliana, Smith, Michelle, Haase, Bettina, Mountcastle, Jacquelyn, Winkler, Sylke, Paez, Sadye, Howard, Jason, Vernes, Sonja C., Lama, Tanya M., Grutzner, Frank, Warren, Wesley C., Balakrishnan, Christopher N., Burt, Dave, George, Julia M., Biegler, Matthew T., Iorns, David, Digby, Andrew, Eason, Daryl, Robertson, Bruce, Edwards, Taylor, Wilkinson, Mark, Turner, George, Meyer, Axel, Kautt, Andreas F., Franchini, Paolo, Detrich, H. William, Svardal, Hannes, Wagner, Maximilian, Naylor, Gavin J. P., Pippel, Martin, Malinsky, Milan, Mooney, Mark, Simbirsky, Maria, Hannigan, Brett T., Pesout, Trevor, Houck, Marlys, Misuraca, Ann, Kingan, Sarah B., Hall, Richard, Kronenberg, Zev, Sović, Ivan, Dunn, Christopher, Ning, Zemin, Hastie, Alex, Lee, Joyce, Selvaraj, Siddarth, Green, Richard E., Putnam, Nicholas H., Gut, Ivo, Ghurye, Jay, Garrison, Erik, Sims, Ying, Collins, Joanna, Pelan, Sarah, Torrance, James, Tracey, Alan, Wood, Jonathan, Dagnew, Robel E., Guan, Dengfeng, London, Sarah E., Clayton, David F., Mello, Claudio V., Friedrich, Samantha R., Lovell, Peter V., Osipova, Ekaterina, Al-Ajli, Farooq O., Secomandi, Simona, Kim, Heebal, Theofanopoulou, Constantina, Hiller, Michael, Zhou, Yang, Harris, Robert S., Makova, Kateryna D., Medvedev, Paul, Hoffman, Jinna, Masterson, Patrick, Clark, Karen, Martin, Fergal, Howe, Kevin, Flicek, Paul, Walenz, Brian P., Kwak, Woori, Clawson, Hiram, Diekhans, Mark, Nassar, Luis, Paten, Benedict, Kraus, Robert H. S., Crawford, Andrew J., Gilbert, M. Thomas P., Zhang, Guojie, Venkatesh, Byrappa, Murphy, Robert W., Koepfli, Klaus-Peter, Shapiro, Beth, Johnson, Warren E., Di Palma, Federica, Marques-Bonet, Tomas, Teeling, Emma C., Warnow, Tandy, Graves, Jennifer Marshall, Ryder, Oliver A., Haussler, David, O’Brien, Stephen J., Korlach, Jonas, Lewin, Harris A., Howe, Kerstin, Myers, Eugene W., Durbin, Richard, Phillippy, Adam M., Jarvis, Erich D.
出版年 Nature (2021)