Yeast two-hybrid interaction partner screening through in vivo Cre-mediated Binary Interaction Tag generation

Autor Hastie, Alex R., Pruitt, Steven C.
Vydáno 2007

Optical Genome Mapping as a Next-Generation Cytogenomic Tool for Detection of Structural and Copy Number Variations for Prenatal Genomic Analyses

Autor Sahajpal, Nikhil Shri, Barseghyan, Hayk, Kolhe, Ravindra, Hastie, Alex, Chaubey, Alka
Vydáno v Genes (Basel) (2021)

Emergency department checklist: an innovation to improve safety in emergency care

Autor Redfern, Emma, Hoskins, Rebecca, Gray, Jackie, Lugg, Jason, Hastie, Alex, Clark, Caroline, Benger, Jonathan
Vydáno v BMJ Open Qual (2018)

Multicolor Super-Resolution DNA Imaging for Genetic Analysis

Autor Baday, Murat, Cravens, Aaron, Hastie, Alex, Kim, HyeongJun, Kudeki, Deren E., Kwok, Pui-Yan, Xiao, Ming, Selvin, Paul R.
Vydáno 2012

Genome mapping on nanochannel arrays for structural variation analysis and sequence assembly

Autor Lam, Ernest T, Hastie, Alex, Lin, Chin, Ehrlich, Dean, Das, Somes K, Austin, Michael D, Deshpande, Paru, Cao, Han, Nagarajan, Niranjan, Xiao, Ming, Kwok, Pui-Yan
Vydáno 2012

Improvement of the banana “Musa acuminata” reference sequence using NGS data and semi-automated bioinformatics methods

Autor Martin, Guillaume, Baurens, Franc-Christophe, Droc, Gaëtan, Rouard, Mathieu, Cenci, Alberto, Kilian, Andrzej, Hastie, Alex, Doležel, Jaroslav, Aury, Jean-Marc, Alberti, Adriana, Carreel, Françoise, D’Hont, Angélique
Vydáno v BMC Genomics (2016)

BioNano genome mapping of individual chromosomes supports physical mapping and sequence assembly in complex plant genomes

Autor Staňková, Helena, Hastie, Alex R., Chan, Saki, Vrána, Jan, Tulpová, Zuzana, Kubaláková, Marie, Visendi, Paul, Hayashi, Satomi, Luo, Mingcheng, Batley, Jacqueline, Edwards, David, Doležel, Jaroslav, Šimková, Hana
Vydáno v Plant Biotechnol J (2016)

Overexpression of Q-rich prion-like proteins suppresses polyQ cytotoxicity and alters the polyQ interactome

Autor Ripaud, Leslie, Chumakova, Victoria, Antonin, Matthias, Hastie, Alex R., Pinkert, Stefan, Körner, Roman, Ruff, Kiersten M., Pappu, Rohit V., Hornburg, Daniel, Mann, Matthias, Hartl, F. Ulrich, Hipp, Mark S.
Vydáno v Proc Natl Acad Sci U S A (2014)

Genome-Wide Mapping of Human DNA Replication by Optical Replication Mapping Supports a Stochastic Model of Eukaryotic Replication

Autor Wang, Weitao, Klein, Kyle, Proesmans, Karel, Yang, Hongbo, Marchal, Claire, Zhu, Xiaopeng, Borrman, Tyler, Hastie, Alex, Weng, Zhiping, Bechhoefer, John, Chen, Chun-Long, Gilbert, David M., Rhind, Nicholas
Vydáno v Mol Cell (2021)

Rapid Genome Mapping in Nanochannel Arrays for Highly Complete and Accurate De Novo Sequence Assembly of the Complex Aegilops tauschii Genome

Autor Hastie, Alex R., Dong, Lingli, Smith, Alexis, Finklestein, Jeff, Lam, Ernest T., Huo, Naxin, Cao, Han, Kwok, Pui-Yan, Deal, Karin R., Dvorak, Jan, Luo, Ming-Cheng, Gu, Yong, Xiao, Ming
Vydáno 2013

Correction: Rapid Genome Mapping in Nanochannel Arrays for Highly Complete and Accurate De Novo Sequence Assembly of the Complex Aegilops tauschii Genome

Autor Hastie, Alex R., Dong, Lingli, Smith, Alexis, Finklestein, Jeff, Lam, Ernest T., Huo, Naxin, Cao, Han, Kwok, Pui-Yan, Deal, Karin R., Dvorak, Jan, Luo, Ming-Cheng, Gu, Yong, Xiao, Ming
Vydáno v PLoS One (2013)

Fully Phased Sequence of a Diploid Human Genome Determined de Novo from the DNA of a Single Individual

Autor Soifer, llya, Fong, Nicole L., Yi, Nelda, Ireland, Andrea T., Lam, Irene, Sooknah, Matthew, Paw, Jonathan S., Peluso, Paul, Concepcion, Gregory T., Rank, David, Hastie, Alex R., Jojic, Vladimir, Ruby, J. Graham, Botstein, David, Roy, Margaret A.
Vydáno v G3 (Bethesda) (2020)

Rapid detection of structural variation in a human genome using nanochannel-based genome mapping technology

Autor Cao, Hongzhi, Hastie, Alex R, Cao, Dandan, Lam, Ernest T, Sun, Yuhui, Huang, Haodong, Liu, Xiao, Lin, Liya, Andrews, Warren, Chan, Saki, Huang, Shujia, Tong, Xin, Requa, Michael, Anantharaman, Thomas, Krogh, Anders, Yang, Huanming, Cao, Han, Xu, Xun
Vydáno v Gigascience (2014)

A Hybrid Approach for de novo Human Genome Sequence Assembly and Phasing

Autor Mostovoy, Yulia, Levy-Sakin, Michal, Lam, Jessica, Lam, Ernest T, Hastie, Alex R, Marks, Patrick, Lee, Joyce, Chu, Catherine, Lin, Chin, Džakula, Željko, Cao, Han, Schlebusch, Stephen A., Giorda, Kristina, Schnall-Levin, Michael, Wall, Jeffrey D., Kwok, Pui-Yan
Vydáno v Nat Methods (2016)

Identification of Somatic Structural Variants in Solid Tumors by Optical Genome Mapping

Autor Goldrich, David Y., LaBarge, Brandon, Chartrand, Scott, Zhang, Lijun, Sadowski, Henry B., Zhang, Yang, Pham, Khoa, Way, Hannah, Lai, Chi-Yu Jill, Pang, Andy Wing Chun, Clifford, Benjamin, Hastie, Alex R., Oldakowski, Mark, Goldenberg, David, Broach, James R.
Vydáno v J Pers Med (2021)

Structural forms of the human amylase locus and their relationships to SNPs, haplotypes, and obesity

Autor Usher, Christina L, Handsaker, Robert E, Esko, Tõnu, Tuke, Marcus A, Weedon, Michael N, Hastie, Alex R, Cao, Han, Moon, Jennifer E, Kashin, Seva, Fuchsberger, Christian, Metspalu, Andres, Pato, Carlos N, Pato, Michele T, McCarthy, Mark I, Boehnke, Michael, Altshuler, David M, Frayling, Timothy M, Hirschhorn, Joel N, McCarroll, Steven A
Vydáno v Nat Genet (2015)

Long-read single-molecule maps of the functional methylome

Autor Sharim, Hila, Grunwald, Assaf, Gabrieli, Tslil, Michaeli, Yael, Margalit, Sapir, Torchinsky, Dmitry, Arielly, Rani, Nifker, Gil, Juhasz, Matyas, Gularek, Felix, Almalvez, Miguel, Dufault, Brandon, Chandra, Sreetama Sen, Liu, Alexander, Bhattacharya, Surajit, Chen, Yi-Wen, Vilain, Eric, Wagner, Kathryn R., Pevsner, Jonathan, Reifenberger, Jeff, Lam, Ernest T., Hastie, Alex R., Cao, Han, Barseghyan, Hayk, Weinhold, Elmar, Ebenstein, Yuval
Vydáno v Genome Res (2019)

Haplotype-resolved genomes provide insights into structural variation and gene content in Angus and Brahman cattle

Autor Low, Wai Yee, Tearle, Rick, Liu, Ruijie, Koren, Sergey, Rhie, Arang, Bickhart, Derek M., Rosen, Benjamin D., Kronenberg, Zev N., Kingan, Sarah B., Tseng, Elizabeth, Thibaud-Nissen, Françoise, Martin, Fergal J., Billis, Konstantinos, Ghurye, Jay, Hastie, Alex R., Lee, Joyce, Pang, Andy W. C., Heaton, Michael P., Phillippy, Adam M., Hiendleder, Stefan, Smith, Timothy P. L., Williams, John L.
Vydáno v Nat Commun (2020)

Genome assembly and geospatial phylogenomics of the bed bug Cimex lectularius

Autor Rosenfeld, Jeffrey A., Reeves, Darryl, Brugler, Mercer R., Narechania, Apurva, Simon, Sabrina, Durrett, Russell, Foox, Jonathan, Shianna, Kevin, Schatz, Michael C., Gandara, Jorge, Afshinnekoo, Ebrahim, Lam, Ernest T., Hastie, Alex R., Chan, Saki, Cao, Han, Saghbini, Michael, Kentsis, Alex, Planet, Paul J., Kholodovych, Vladyslav, Tessler, Michael, Baker, Richard, DeSalle, Rob, Sorkin, Louis N., Kolokotronis, Sergios-Orestis, Siddall, Mark E., Amato, George, Mason, Christopher E.
Vydáno v Nat Commun (2016)

Genome maps across 26 human populations reveal population-specific patterns of structural variation

Autor Levy-Sakin, Michal, Pastor, Steven, Mostovoy, Yulia, Li, Le, Leung, Alden K. Y., McCaffrey, Jennifer, Young, Eleanor, Lam, Ernest T., Hastie, Alex R., Wong, Karen H. Y., Chung, Claire Y. L., Ma, Walfred, Sibert, Justin, Rajagopalan, Ramakrishnan, Jin, Nana, Chow, Eugene Y. C., Chu, Catherine, Poon, Annie, Lin, Chin, Naguib, Ahmed, Wang, Wei-Ping, Cao, Han, Chan, Ting-Fung, Yip, Kevin Y., Xiao, Ming, Kwok, Pui-Yan
Vydáno v Nat Commun (2019)