Assessment of REPLI-g Multiple Displacement Whole Genome Amplification (WGA) Techniques for Metagenomic Applications

Por Ahsanuddin, Sofia, Afshinnekoo, Ebrahim, Gandara, Jorge, Hakyemezoğlu, Mustafa, Bezdan, Daniela, Minot, Samuel, Greenfield, Nick, Mason, Christopher E.
Publicado no J Biomol Tech (2017)

Mining the Archives: A Cross-Platform Analysis of Gene Expression Profiles in Archival Formalin-Fixed Paraffin-Embedded Tissues

Por Webster, A. Francina, Zumbo, Paul, Fostel, Jennifer, Gandara, Jorge, Hester, Susan D., Recio, Leslie, Williams, Andrew, Wood, Charles E., Yauk, Carole L., Mason, Christopher E.
Publicado no Toxicol Sci (2015)

Genomic DNA transposition induced by human PGBD5

Por Henssen, Anton G, Henaff, Elizabeth, Jiang, Eileen, Eisenberg, Amy R, Carson, Julianne R, Villasante, Camila M, Ray, Mondira, Still, Eric, Burns, Melissa, Gandara, Jorge, Feschotte, Cedric, Mason, Christopher E, Kentsis, Alex
Publicado no eLife (2015)

N6-Methyladenosine in Flaviviridae Viral RNA Genomes Regulates Infection

Por Gokhale, Nandan S., McIntyre, Alexa B.R., McFadden, Michael J., Roder, Allison E., Kennedy, Edward M., Gandara, Jorge A., Hopcraft, Sharon E., Quicke, Kendra M., Vazquez, Christine, Willer, Jason, Ilkayeva, Olga R., Law, Brittany A., Holley, Christopher L., Garcia-Blanco, Mariano A., Evans, Matthew J., Suthar, Mehul S., Bradrick, Shelton S., Mason, Christopher E., Horner, Stacy M.
Publicado no Cell Host Microbe (2016)

Multi-platform and cross-methodological reproducibility of transcriptome profiling by RNA-seq in the ABRF Next-Generation Sequencing Study

Por Li, Sheng, Tighe, Scott W., Nicolet, Charles M., Grove, Deborah, Levy, Shawn, Farmerie, William, Viale, Agnes, Wright, Chris, Schweitzer, Peter A., Gao, Yuan, Kim, Dewey, Boland, Joe, Hicks, Belynda, Kim, Ryan, Chhangawala, Sagar, Jafari, Nadereh, Raghavachari, Nalini, Gandara, Jorge, Garcia-Reyero, Natàlia, Hendrickson, Cynthia, Roberson, David, Rosenfeld, Jeffrey, Smith, Todd, Underwood, Jason G., Wang, May, Zumbo, Paul, Baldwin, Don A., Grills, George S., Mason, Christopher E.
Publicado em 2014

Genome assembly and geospatial phylogenomics of the bed bug Cimex lectularius

Por Rosenfeld, Jeffrey A., Reeves, Darryl, Brugler, Mercer R., Narechania, Apurva, Simon, Sabrina, Durrett, Russell, Foox, Jonathan, Shianna, Kevin, Schatz, Michael C., Gandara, Jorge, Afshinnekoo, Ebrahim, Lam, Ernest T., Hastie, Alex R., Chan, Saki, Cao, Han, Saghbini, Michael, Kentsis, Alex, Planet, Paul J., Kholodovych, Vladyslav, Tessler, Michael, Baker, Richard, DeSalle, Rob, Sorkin, Louis N., Kolokotronis, Sergios-Orestis, Siddall, Mark E., Amato, George, Mason, Christopher E.
Publicado no Nat Commun (2016)

Geospatial Resolution of Human and Bacterial Diversity with City-Scale Metagenomics

Por Afshinnekoo, Ebrahim, Meydan, Cem, Chowdhury, Shanin, Jaroudi, Dyala, Boyer, Collin, Bernstein, Nick, Maritz, Julia M., Reeves, Darryl, Gandara, Jorge, Chhangawala, Sagar, Ahsanuddin, Sofia, Simmons, Amber, Nessel, Timothy, Sundaresh, Bharathi, Pereira, Elizabeth, Jorgensen, Ellen, Kolokotronis, Sergios-Orestis, Kirchberger, Nell, Garcia, Isaac, Gandara, David, Dhanraj, Sean, Nawrin, Tanzina, Saletore, Yogesh, Alexander, Noah, Vijay, Priyanka, Hénaff, Elizabeth M., Zumbo, Paul, Walsh, Michael, O’Mullan, Gregory D., Tighe, Scott, Dudley, Joel T., Dunaif, Anya, Ennis, Sean, O’Halloran, Eoghan, Magalhaes, Tiago R., Boone, Braden, Jones, Angela L., Muth, Theodore R., Paolantonio, Katie Schneider, Alter, Elizabeth, Schadt, Eric E., Garbarino, Jeanne, Prill, Robert J., Carlton, Jane M., Levy, Shawn, Mason, Christopher E.
Publicado no Cell Syst (2015)