Conserved microRNA targeting in Drosophila is as widespread in coding regions as in 3′UTRs

Por Schnall-Levin, Michael, Zhao, Yong, Perrimon, Norbert, Berger, Bonnie
Publicado em 2010

Unusually effective microRNA targeting within repeat-rich coding regions of mammalian mRNAs

Por Schnall-Levin, Michael, Rissland, Olivia S., Johnston, Wendy K., Perrimon, Norbert, Bartel, David P., Berger, Bonnie
Publicado em 2011

High-Throughput Single-Cell Labeling (Hi-SCL) for RNA-Seq Using Drop-Based Microfluidics

Por Rotem, Assaf, Ram, Oren, Shoresh, Noam, Sperling, Ralph A., Schnall-Levin, Michael, Zhang, Huidan, Basu, Anindita, Bernstein, Bradley E., Weitz, David A.
Publicado no PLoS One (2015)

Genetic Determinants of Phosphate Response in Drosophila

Por Bergwitz, Clemens, Wee, Mark J., Sinha, Sumi, Huang, Joanne, DeRobertis, Charles, Mensah, Lawrence B., Cohen, Jonathan, Friedman, Adam, Kulkarni, Meghana, Hu, Yanhui, Vinayagam, Arunachalam, Schnall-Levin, Michael, Berger, Bonnie, Perkins, Lizabeth A., Mohr, Stephanie E., Perrimon, Norbert
Publicado em 2013

A Hybrid Approach for de novo Human Genome Sequence Assembly and Phasing

Por Mostovoy, Yulia, Levy-Sakin, Michal, Lam, Jessica, Lam, Ernest T, Hastie, Alex R, Marks, Patrick, Lee, Joyce, Chu, Catherine, Lin, Chin, Džakula, Željko, Cao, Han, Schlebusch, Stephen A., Giorda, Kristina, Schnall-Levin, Michael, Wall, Jeffrey D., Kwok, Pui-Yan
Publicado no Nat Methods (2016)

A transgenic resource for conditional competitive inhibition of conserved Drosophila microRNAs

Por Fulga, Tudor A., McNeill, Elizabeth M., Binari, Richard, Yelick, Julia, Blanche, Alexandra, Booker, Matthew, Steinkraus, Bruno R., Schnall-Levin, Michael, Zhao, Yong, DeLuca, Todd, Bejarano, Fernando, Han, Zhe, Lai, Eric C., Wall, Dennis P., Perrimon, Norbert, Van Vactor, David
Publicado no Nat Commun (2015)

Massively parallel digital transcriptional profiling of single cells

Por Zheng, Grace X. Y., Terry, Jessica M., Belgrader, Phillip, Ryvkin, Paul, Bent, Zachary W., Wilson, Ryan, Ziraldo, Solongo B., Wheeler, Tobias D., McDermott, Geoff P., Zhu, Junjie, Gregory, Mark T., Shuga, Joe, Montesclaros, Luz, Underwood, Jason G., Masquelier, Donald A., Nishimura, Stefanie Y., Schnall-Levin, Michael, Wyatt, Paul W., Hindson, Christopher M., Bharadwaj, Rajiv, Wong, Alexander, Ness, Kevin D., Beppu, Lan W., Deeg, H. Joachim, McFarland, Christopher, Loeb, Keith R., Valente, William J., Ericson, Nolan G., Stevens, Emily A., Radich, Jerald P., Mikkelsen, Tarjei S., Hindson, Benjamin J., Bielas, Jason H.
Publicado no Nat Commun (2017)

Health and population effects of rare gene knockouts in adult humans with related parents

Por Narasimhan, Vagheesh M., Hunt, Karen A., Mason, Dan, Baker, Christopher L., Karczewski, Konrad J., Barnes, Michael R., Barnett, Anthony H., Bates, Chris, Bellary, Srikanth, Bockett, Nicholas A., Giorda, Kristina, Griffiths, Christopher J., Hemingway, Harry, Jia, Zhilong, Kelly, M. Ann, Khawaja, Hajrah A., Lek, Monkol, McCarthy, Shane, McEachan, Rosie, O’Donnell-Luria, Anne, Paigen, Kenneth, Parisinos, Constantinos A., Sheridan, Eamonn, Southgate, Laura, Tee, Louise, Thomas, Mark, Xue, Yali, Schnall-Levin, Michael, Petkov, Petko M., Tyler-Smith, Chris, Maher, Eamonn R., Trembath, Richard C., MacArthur, Daniel G., Wright, John, Durbin, Richard, van Heel, David A.
Publicado no Science (2016)

Development and validation of a clinical cancer genomic profiling test based on massively parallel DNA sequencing

Por Frampton, Garrett M, Fichtenholtz, Alex, Otto, Geoff A, Wang, Kai, Downing, Sean R, He, Jie, Schnall-Levin, Michael, White, Jared, Sanford, Eric M, An, Peter, Sun, James, Juhn, Frank, Brennan, Kristina, Iwanik, Kiel, Maillet, Ashley, Buell, Jamie, White, Emily, Zhao, Mandy, Balasubramanian, Sohail, Terzic, Selmira, Richards, Tina, Banning, Vera, Garcia, Lazaro, Mahoney, Kristen, Zwirko, Zac, Donahue, Amy, Beltran, Himisha, Mosquera, Juan Miguel, Rubin, Mark A, Dogan, Snjezana, Hedvat, Cyrus V, Berger, Michael F, Pusztai, Lajos, Lechner, Matthias, Boshoff, Chris, Jarosz, Mirna, Vietz, Christine, Parker, Alex, Miller, Vincent A, Ross, Jeffrey S, Curran, John, Cronin, Maureen T, Stephens, Philip J, Lipson, Doron, Yelensky, Roman
Publicado no Nat Biotechnol (2013)

Resolving the full spectrum of human genome variation using Linked-Reads

Por Marks, Patrick, Garcia, Sarah, Barrio, Alvaro Martinez, Belhocine, Kamila, Bernate, Jorge, Bharadwaj, Rajiv, Bjornson, Keith, Catalanotti, Claudia, Delaney, Josh, Fehr, Adrian, Fiddes, Ian T., Galvin, Brendan, Heaton, Haynes, Herschleb, Jill, Hindson, Christopher, Holt, Esty, Jabara, Cassandra B., Jett, Susanna, Keivanfar, Nikka, Kyriazopoulou-Panagiotopoulou, Sofia, Lek, Monkol, Lin, Bill, Lowe, Adam, Mahamdallie, Shazia, Maheshwari, Shamoni, Makarewicz, Tony, Marshall, Jamie, Meschi, Francesca, O'Keefe, Christopher J., Ordonez, Heather, Patel, Pranav, Price, Andrew, Royall, Ariel, Ruark, Elise, Seal, Sheila, Schnall-Levin, Michael, Shah, Preyas, Stafford, David, Williams, Stephen, Wu, Indira, Xu, Andrew Wei, Rahman, Nazneen, MacArthur, Daniel, Church, Deanna M.
Publicado no Genome Res (2019)

Extensive sequencing of seven human genomes to characterize benchmark reference materials

Por Zook, Justin M., Catoe, David, McDaniel, Jennifer, Vang, Lindsay, Spies, Noah, Sidow, Arend, Weng, Ziming, Liu, Yuling, Mason, Christopher E., Alexander, Noah, Henaff, Elizabeth, McIntyre, Alexa B.R., Chandramohan, Dhruva, Chen, Feng, Jaeger, Erich, Moshrefi, Ali, Pham, Khoa, Stedman, William, Liang, Tiffany, Saghbini, Michael, Dzakula, Zeljko, Hastie, Alex, Cao, Han, Deikus, Gintaras, Schadt, Eric, Sebra, Robert, Bashir, Ali, Truty, Rebecca M., Chang, Christopher C., Gulbahce, Natali, Zhao, Keyan, Ghosh, Srinka, Hyland, Fiona, Fu, Yutao, Chaisson, Mark, Xiao, Chunlin, Trow, Jonathan, Sherry, Stephen T., Zaranek, Alexander W., Ball, Madeleine, Bobe, Jason, Estep, Preston, Church, George M., Marks, Patrick, Kyriazopoulou-Panagiotopoulou, Sofia, Zheng, Grace X.Y., Schnall-Levin, Michael, Ordonez, Heather S., Mudivarti, Patrice A., Giorda, Kristina, Sheng, Ying, Rypdal, Karoline Bjarnesdatter, Salit, Marc
Publicado no Sci Data (2016)

Haplotyping germline and cancer genomes using high-throughput linked-read sequencing

Por Zheng, Grace X.Y., Lau, Billy T., Schnall-Levin, Michael, Jarosz, Mirna, Bell, John M., Hindson, Christopher M., Kyriazopoulou-Panagiotopoulou, Sofia, Masquelier, Donald A., Merrill, Landon, Terry, Jessica M., Mudivarti, Patrice A., Wyatt, Paul W., Bharadwaj, Rajiv, Makarewicz, Anthony J., Li, Yuan, Belgrader, Phillip, Price, Andrew D., Lowe, Adam J., Marks, Patrick, Vurens, Gerard M., Hardenbol, Paul, Montesclaros, Luz, Luo, Melissa, Greenfield, Lawrence, Wong, Alexander, Birch, David E., Short, Steven W., Bjornson, Keith P., Patel, Pranav, Hopmans, Erik S., Wood, Christina, Kaur, Sukhvinder, Lockwood, Glenn K., Stafford, David, Delaney, Joshua P., Wu, Indira, Ordonez, Heather S., Grimes, Susan M., Greer, Stephanie, Lee, Josephine Y., Belhocine, Kamila, Giorda, Kristina M., Heaton, William H., McDermott, Geoffrey P., Bent, Zachary W., Meschi, Francesca, Kondov, Nikola O., Wilson, Ryan, Bernate, Jorge A., Gauby, Shawn, Kindwall, Alex, Bermejo, Clara, Fehr, Adrian N., Chan, Adrian, Saxonov, Serge, Ness, Kevin D., Hindson, Benjamin J., Ji, Hanlee P.
Publicado no Nat Biotechnol (2016)