Concepts in solid tumor evolution

nork Sidow, Arend, Spies, Noah
Argitaratua izan da Trends Genet (2015)

Physicochemical constraint violation by missense substitutions mediates impairment of protein function and disease severity

nork Stone, Eric A., Sidow, Arend
Argitaratua 2005

Constructing a meaningful evolutionary average at the phylogenetic center of mass

nork Stone, Eric A, Sidow, Arend
Argitaratua 2007

Transcription-factor occupancy at HOT regions quantitatively predicts RNA polymerase recruitment in five human cell lines

nork Foley, Joseph W, Sidow, Arend
Argitaratua 2013

The future of sequencing: convergence of intelligent design and market Darwinism

nork Greenleaf, William J, Sidow, Arend
Argitaratua 2014

Molecular phylogeny

nork Sidow, Arend, Bowman, Barbara H
Argitaratua izan da Curr Biol (1992)

Inference of functional regions in proteins by quantification of evolutionary constraints

nork Simon, Alexander L., Stone, Eric A., Sidow, Arend
Argitaratua 2002

ABC: software for interactive browsing of genomic multiple sequence alignment data

nork Cooper, Gregory M, Singaravelu, Senthil AG, Sidow, Arend
Argitaratua 2004

HAPDeNovo: a haplotype-based approach for filtering and phasing de novo mutations in linked read sequencing data

nork Zhou, Xin, Batzoglou, Serafim, Sidow, Arend, Zhang, Lu
Argitaratua izan da BMC Genomics (2018)

Assessment of human diploid genome assembly with 10x Linked-Reads data

nork Zhang, Lu, Zhou, Xin, Weng, Ziming, Sidow, Arend
Argitaratua izan da Gigascience (2019)

De novo diploid genome assembly for genome-wide structural variant detection

nork Zhang, Lu, Zhou, Xin, Weng, Ziming, Sidow, Arend
Argitaratua izan da NAR Genom Bioinform (2019)

Extreme genomic variation in a natural population

nork Small, Kerrin S., Brudno, Michael, Hill, Matthew M., Sidow, Arend
Argitaratua 2007

A haplome alignment and reference sequence of the highly polymorphic Ciona savignyi genome

nork Small, Kerrin S, Brudno, Michael, Hill, Matthew M, Sidow, Arend
Argitaratua 2007

The integrity of a cholesterol-binding pocket in Niemann–Pick C2 protein is necessary to control lysosome cholesterol levels

nork Ko, Dennis C., Binkley, Jonathan, Sidow, Arend, Scott, Matthew P.
Argitaratua 2003

Mammalian Comparative Sequence Analysis of the Agrp Locus

nork Kaelin, Christopher B., Cooper, Gregory M., Sidow, Arend, Barsh, Gregory S.
Argitaratua 2007

Multi-omic tumor data reveal diversity of molecular mechanisms that correlate with survival

nork Ramazzotti, Daniele, Lal, Avantika, Wang, Bo, Batzoglou, Serafim, Sidow, Arend
Argitaratua izan da Nat Commun (2018)

De novo mutational signature discovery in tumor genomes using SparseSignatures

nork Lal, Avantika, Liu, Keli, Tibshirani, Robert, Sidow, Arend, Ramazzotti, Daniele
Argitaratua izan da PLoS Comput Biol (2021)

Partitioning of Tissue Expression Accompanies Multiple Duplications of the Na+/K+ ATPase α Subunit Gene

nork Serluca, Fabrizio C., Sidow, Arend, Mably, John D., Fishman, Mark C.
Argitaratua 2001

Aquila enables reference-assisted diploid personal genome assembly and comprehensive variant detection based on linked reads

nork Zhou, Xin, Zhang, Lu, Weng, Ziming, Dill, David L., Sidow, Arend
Argitaratua izan da Nat Commun (2021)

Noncoding regulatory sequences of Ciona exhibit strong correspondence between evolutionary constraint and functional importance

nork Johnson, David S., Davidson, Brad, Brown, Christopher D., Smith, William C., Sidow, Arend
Argitaratua 2004