Maximum Likelihood Genome Assembly

Por Medvedev, Paul, Brudno, Michael
Publicado em 2009

The CHAOS/DIALIGN WWW server for multiple alignment of genomic sequences

Por Brudno, Michael, Steinkamp, Rasmus, Morgenstern, Burkhard
Publicado em 2004

A robust framework for detecting structural variations in a genome

Por Lee, Seunghak, Cheran, Elango, Brudno, Michael
Publicado em 2008

Detecting Alu insertions from high-throughput sequencing data

Por David, Matei, Mustafa, Harun, Brudno, Michael
Publicado em 2013

Probabilistic method for detecting copy number variation in a fetal genome using maternal plasma sequencing

Por Rampášek, Ladislav, Arbabi, Aryan, Brudno, Michael
Publicado em 2014

Assembly and characterization of novel Alu inserts detected from next-generation sequencing data

Por Mustafa, Harun, David, Matei, Brudno, Michael
Publicado no Mob Genet Elements (2014)

The missing indels: an estimate of indel variation in a human genome and analysis of factors that impede detection

Por Jiang, Yue, Turinsky, Andrei L., Brudno, Michael
Publicado no Nucleic Acids Res (2015)

Multiple whole-genome alignments without a reference organism

Por Dubchak, Inna, Poliakov, Alexander, Kislyuk, Andrey, Brudno, Michael
Publicado em 2009

Savant: genome browser for high-throughput sequencing data

Por Fiume, Marc, Williams, Vanessa, Brook, Andrew, Brudno, Michael
Publicado em 2010

GenomeVISTA—an integrated software package for whole-genome alignment and visualization

Por Poliakov, Alexandre, Foong, Justin, Brudno, Michael, Dubchak, Inna
Publicado em 2014

Prioritizing Clinically Relevant Copy Number Variation from Genetic Interactions and Gene Function Data

Por Foong, Justin, Girdea, Marta, Stavropoulos, James, Brudno, Michael
Publicado no PLoS One (2015)

Extreme genomic variation in a natural population

Por Small, Kerrin S., Brudno, Michael, Hill, Matthew M., Sidow, Arend
Publicado em 2007

A haplome alignment and reference sequence of the highly polymorphic Ciona savignyi genome

Por Small, Kerrin S, Brudno, Michael, Hill, Matthew M, Sidow, Arend
Publicado em 2007

Polymorphism Due to Multiple Amino Acid Substitutions at a Codon Site Within Ciona savignyi

Por Donmez, Nilgun, Bazykin, Georgii A., Brudno, Michael, Kondrashov, Alexey S.
Publicado em 2009

Fast and sensitive multiple alignment of large genomic sequences

Por Brudno, Michael, Chapman, Michael, Göttgens, Berthold, Batzoglou, Serafim, Morgenstern, Burkhard
Publicado em 2003

Multiple whole genome alignments and novel biomedical applications at the VISTA portal

Por Brudno, Michael, Poliakov, Alexander, Minovitsky, Simon, Ratnere, Igor, Dubchak, Inna
Publicado em 2007

VARiD: A variation detection framework for color-space and letter-space platforms

Por Dalca, Adrian V., Rumble, Stephen M., Levy, Samuel, Brudno, Michael
Publicado em 2010

Detecting copy number variation with mated short reads

Por Medvedev, Paul, Fiume, Marc, Dzamba, Misko, Smith, Tim, Brudno, Michael
Publicado em 2010

ProbCons: Probabilistic consistency-based multiple sequence alignment

Por Do, Chuong B., Mahabhashyam, Mahathi S.P., Brudno, Michael, Batzoglou, Serafim
Publicado em 2005

Computational analysis of candidate intron regulatory elements for tissue-specific alternative pre-mRNA splicing

Por Brudno, Michael, Gelfand, Mikhail S., Spengler, Sylvia, Zorn, Manfred, Dubchak, Inna, Conboy, John G.
Publicado em 2001