VISTA Enhancer Browser—a database of tissue-specific human enhancers

Por Visel, Axel, Minovitsky, Simon, Dubchak, Inna, Pennacchio, Len A.
Publicado em 2007

Short sequence motifs, overrepresented in mammalian conserved non-coding sequences

Por Kondrashov Alexey S, Kel Alexander, Stegmaier Philip, Minovitsky Simon, Dubchak Inna
Publicado em 2007-10-01

Multiple whole genome alignments and novel biomedical applications at the VISTA portal

Por Brudno, Michael, Poliakov, Alexander, Minovitsky, Simon, Ratnere, Igor, Dubchak, Inna
Publicado em 2007

Short sequence motifs, overrepresented in mammalian conserved non-coding sequences

Por Minovitsky, Simon, Stegmaier, Philip, Kel, Alexander, Kondrashov, Alexey S, Dubchak, Inna
Publicado em 2007

The splicing regulatory element, UGCAUG, is phylogenetically and spatially conserved in introns that flank tissue-specific alternative exons

Por Minovitsky, Simon, Gee, Sherry L., Schokrpur, Shiruyeh, Dubchak, Inna, Conboy, John G.
Publicado em 2005

VISTA Region Viewer (RViewer)—a computational system for prioritizing genomic intervals for biomedical studies

Por Lukashin, Igor, Novichkov, Pavel, Boffelli, Dario, Paciorkowski, Alex R., Minovitsky, Simon, Yang, Song, Dubchak, Inna
Publicado em 2011

Whole-Genome rVISTA: a tool to determine enrichment of transcription factor binding sites in gene promoters from transcriptomic data

Por Dubchak, Inna, Munoz, Matthew, Poliakov, Alexandre, Salomonis, Nathan, Minovitsky, Simon, Bodmer, Rolf, Zambon, Alexander C.
Publicado em 2013

SNP-VISTA: An interactive SNP visualization tool

Por Shah, Nameeta, Teplitsky, Michael V, Minovitsky, Simon, Pennacchio, Len A, Hugenholtz, Philip, Hamann, Bernd, Dubchak, Inna L
Publicado em 2005

RegTransBase—a database of regulatory sequences and interactions in a wide range of prokaryotic genomes

Por Kazakov, Alexei E., Cipriano, Michael J., Novichkov, Pavel S., Minovitsky, Simon, Vinogradov, Dmitry V., Arkin, Adam, Mironov, Andrey A., Gelfand, Mikhail S., Dubchak, Inna
Publicado em 2007

Gene expression patterns define key transcriptional events in cell-cycle regulation by cAMP and protein kinase A

Por Zambon, Alexander C., Zhang, Lingzhi, Minovitsky, Simon, Kanter, Joan R., Prabhakar, Shyam, Salomonis, Nathan, Vranizan, Karen, Dubchak, Inna, Conklin, Bruce R., Insel, Paul A.
Publicado em 2005

A correlation with exon expression approach to identify cis-regulatory elements for tissue-specific alternative splicing

Por Das, Debopriya, Clark, Tyson A., Schweitzer, Anthony, Yamamoto, Miki, Marr, Henry, Arribere, Josh, Minovitsky, Simon, Poliakov, Alexander, Dubchak, Inna, Blume, John E., Conboy, John G.
Publicado em 2007

The Genome Portal of the Department of Energy Joint Genome Institute

Por Grigoriev, Igor V., Nordberg, Henrik, Shabalov, Igor, Aerts, Andrea, Cantor, Mike, Goodstein, David, Kuo, Alan, Minovitsky, Simon, Nikitin, Roman, Ohm, Robin A., Otillar, Robert, Poliakov, Alex, Ratnere, Igor, Riley, Robert, Smirnova, Tatyana, Rokhsar, Daniel, Dubchak, Inna
Publicado em 2012

Combinatorial regulation of endothelial gene expression by ets and forkhead transcription factors

Por De Val, Sarah, Chi, Neil C., Meadows, Stryder M., Minovitsky, Simon, Anderson, Joshua P., Harris, Ian S., Ehlers, Melissa L., Agarwal, Pooja, Visel, Axel, Xu, Shan-Mei, Pennacchio, Len A., Dubchak, Inna, Krieg, Paul A., Stainier, Didier Y. R., Black, Brian L.
Publicado em 2008