RNAmotifs: prediction of multivalent RNA motifs that control alternative splicing

Por Cereda, Matteo, Pozzoli, Uberto, Rot, Gregor, Juvan, Peter, Schweitzer, Anthony, Clark, Tyson, Ule, Jernej
Publicado em 2014

Alternative pre-mRNA splicing switches modulate gene expression in late erythropoiesis

Por Yamamoto, Miki L., Clark, Tyson A., Gee, Sherry L., Kang, Jeong-Ah, Schweitzer, Anthony C., Wickrema, Amittha, Conboy, John G.
Publicado em 2009

Discovery of tissue-specific exons using comprehensive human exon microarrays

Por Clark, Tyson A, Schweitzer, Anthony C, Chen, Tina X, Staples, Michelle K, Lu, Gang, Wang, Hui, Williams, Alan, Blume, John E
Publicado em 2007

A correlation with exon expression approach to identify cis-regulatory elements for tissue-specific alternative splicing

Por Das, Debopriya, Clark, Tyson A., Schweitzer, Anthony, Yamamoto, Miki, Marr, Henry, Arribere, Josh, Minovitsky, Simon, Poliakov, Alexander, Dubchak, Inna, Blume, John E., Conboy, John G.
Publicado em 2007

Identification of Genetic Variants Contributing to Cisplatin-Induced Cytotoxicity by Use of a Genomewide Approach

Por Huang, R. Stephanie , Duan, Shiwei , Shukla, Sunita J. , Kistner, Emily O. , Clark, Tyson A. , Chen, Tina X. , Schweitzer, Anthony C. , Blume, John E. , Dolan, M. Eileen 
Publicado em 2007

Position-dependent alternative splicing activity revealed by global profiling of alternative splicing events regulated by PTB

Por Llorian, Miriam, Schwartz, Schraga, Clark, Tyson A., Hollander, Dror, Tan, Lit-Yeen, Spellman, Rachel, Gordon, Adele, Schweitzer, Anthony C., de la Grange, Pierre, Ast, Gil, Smith, Christopher WJ
Publicado em 2010

Alternative splicing and differential gene expression in colon cancer detected by a whole genome exon array

Por Gardina, Paul J, Clark, Tyson A, Shimada, Brian, Staples, Michelle K, Yang, Qing, Veitch, James, Schweitzer, Anthony, Awad, Tarif, Sugnet, Charles, Dee, Suzanne, Davies, Christopher, Williams, Alan, Turpaz, Yaron
Publicado em 2006

A genome-wide approach to identify genetic variants that contribute to etoposide-induced cytotoxicity

Por Huang, R. Stephanie, Duan, Shiwei, Bleibel, Wasim K., Kistner, Emily O., Zhang, Wei, Clark, Tyson A., Chen, Tina X., Schweitzer, Anthony C., Blume, John E., Cox, Nancy J., Dolan, M. Eileen
Publicado em 2007

Evaluation of Genetic Variation Contributing to Differences in Gene Expression between Populations

Por Zhang, Wei, Duan, Shiwei, Kistner, Emily O., Bleibel, Wasim K., Huang, R. Stephanie, Clark, Tyson A., Chen, Tina X., Schweitzer, Anthony C., Blume, John E., Cox, Nancy J., Dolan, M. Eileen
Publicado em 2008

Evaluation of Genetic Variation Contributing to Differences in Gene Expression between Populations

Por Zhang, Wei, Duan, Shiwei, Kistner, Emily O., Bleibel, Wasim K., Huang, R. Stephanie, Clark, Tyson A., Chen, Tina X., Schweitzer, Anthony C., Blume, John E., Cox, Nancy J., Dolan, M. Eileen
Publicado em 2008

Genetic Architecture of Transcript-Level Variation in Humans

Por Duan, Shiwei, Huang, R. Stephanie, Zhang, Wei, Bleibel, Wasim K., Roe, Cheryl A., Clark, Tyson A., Chen, Tina X., Schweitzer, Anthony C., Blume, John E., Cox, Nancy J., Dolan, M. Eileen
Publicado em 2008

Heritability of alternative splicing in the human genome

Por Kwan, Tony, Benovoy, David, Dias, Christel, Gurd, Scott, Serre, David, Zuzan, Harry, Clark, Tyson A., Schweitzer, Anthony, Staples, Michelle K., Wang, Hui, Blume, John E., Hudson, Thomas J., Sladek, Rob, Majewski, Jacek
Publicado em 2007

HITS-CLIP yields genome-wide insights into brain alternative RNA processing

Por Licatalosi, Donny D., Mele, Aldo, Fak, John J., Ule, Jernej, Kayikci, Melis, Chi, Sung Wook, Clark, Tyson A., Schweitzer, Anthony C., Blume, John E., Wang, Xuning, Darnell, Jennifer C., Darnell, Robert B.
Publicado em 2008

Analysis of alternative splicing associated with aging and neurodegeneration in the human brain

Por Tollervey, James R., Wang, Zhen, Hortobágyi, Tibor, Witten, Joshua T., Zarnack, Kathi, Kayikci, Melis, Clark, Tyson A., Schweitzer, Anthony C., Rot, Gregor, Curk, Tomaž, Zupan, Blaž, Rogelj, Boris, Shaw, Christopher E., Ule, Jernej
Publicado em 2011

Identification of common genetic variants that account for transcript isoform variation between human populations

Por Zhang, Wei, Duan, Shiwei, Bleibel, Wasim K., Wisel, Steven A., Huang, R. Stephanie, Wu, Xiaolin, He, Lijun, Clark, Tyson A., Chen, Tina X., Schweitzer, Anthony C., Blume, John E., Dolan, M. Eileen, Cox, Nancy J.
Publicado em 2008

Exon-level microarray analyses identify alternative splicing programs in breast cancer

Por Lapuk, Anna, Marr, Henry, Jakkula, Lakshmi, Pedro, Helder, Bhattacharya, Sanchita, Purdom, Elizabeth, Hu, Zhi, Simpson, Ken, Pachter, Lior, Durinck, Steffen, Wang, Nicholas, Parvin, Bahram, Fontenay, Gerald, Speed, Terence, Garbe, James, Stampfer, Martha, Bayandorian, Hovig, Dorton, Shannon, Clark, Tyson A., Schweitzer, Anthony, Wyrobek, Andrew, Feiler, Heidi, Spellman, Paul, Conboy, John, Gray, Joe W.
Publicado em 2010

Establishing and characterizing patient-derived xenografts using pre-chemotherapy percutaneous biopsy and post-chemotherapy surgical samples from a prospective neoadjuvant breast c...

Por Yu, Jia, Qin, Bo, Moyer, Ann M., Sinnwell, Jason P., Thompson, Kevin J., Copland, John A., Marlow, Laura A., Miller, James L., Yin, Ping, Gao, Bowen, Minter-Dykhouse, Katherine, Tang, Xiaojia, McLaughlin, Sarah A., Moreno-Aspitia, Alvaro, Schweitzer, Anthony, Lu, Yan, Hubbard, Jason, Northfelt, Donald W., Gray, Richard J., Hunt, Katie, Conners, Amy L., Suman, Vera J., Kalari, Krishna R., Ingle, James N., Lou, Zhenkun, Visscher, Daniel W., Weinshilboum, Richard, Boughey, Judy C., Goetz, Matthew P., Wang, Liewei
Publicado no Breast Cancer Res (2017)

Correction to: Establishing and characterizing patient-derived xenografts using pre-chemotherapy percutaneous biopsy and post-chemotherapy surgical samples from a prospective neoad...

Por Yu, Jia, Qin, Bo, Moyer, Ann M., Sinnwell, Jason P., Thompson, Kevin J., Copland, John A., Marlow, Laura A., Miller, James L., Yin, Ping, Gao, Bowen, Minter-Dykhouse, Katherine, Tang, Xiaojia, McLaughlin, Sarah A., Moreno-Aspitia, Alvaro, Schweitzer, Anthony, Lu, Yan, Hubbard, Jason, Northfelt, Donald W., Gray, Richard J., Hunt, Katie, Conners, Amy L., Suman, Vera J., Kalari, Krishna R., Ingle, James N., Lou, Zhenkun, Visscher, Daniel W., Weinshilboum, Richard, Boughey, Judy C., Goetz, Matthew P., Wang, Liewei
Publicado no Breast Cancer Res (2021)

Human transcriptome array for high-throughput clinical studies

Por Xu, Weihong, Seok, Junhee, Mindrinos, Michael N., Schweitzer, Anthony C., Jiang, Hui, Wilhelmy, Julie, Clark, Tyson A., Kapur, Karen, Xing, Yi, Faham, Malek, Storey, John D., Moldawer, Lyle L., Maier, Ronald V., Tompkins, Ronald G., Wong, Wing Hung, Davis, Ronald W., Xiao, Wenzhong, Toner, Mehmet, Warren, H. Shaw, Schoenfeld, David A., Rahme, Laurence, McDonald-Smith, Grace P., Hayden, Douglas, Mason, Philip, Fagan, Shawn, Yu, Yong-Ming, Cobb, J. Perren, Remick, Daniel G., Mannick, John A., Lederer, James A., Gamelli, Richard L., Silver, Geoffrey M., West, Michael A., Shapiro, Michael B., Smith, Richard, Camp, David G., Qian, Weijun, Tibshirani, Rob, Lowry, Stephen, Calvano, Steven, Chaudry, Irshad, Cohen, Mitchell, Moore, Ernest E., Johnson, Jeffrey, Baker, Henry V., Efron, Philip A., Balis, Ulysses G. J., Billiar, Timothy R., Ochoa, Juan B., Sperry, Jason L., Miller-Graziano, Carol L., De, Asit K., Bankey, Paul E., Herndon, David N., Finnerty, Celeste C., Jeschke, Marc G., Minei, Joseph P., Arnoldo, Brett D., Hunt, John L., Horton, Jureta, Cobb, J. Perren, Brownstein, Bernard, Freeman, Bradley, Nathens, Avery B., Cuschieri, Joseph, Gibran, Nicole, Klein, Matthew, O'Keefe, Grant
Publicado em 2011