Direct Detection and Sequencing of Damaged DNA Bases

Por Clark, Tyson A, Spittle, Kristi E, Turner, Stephen W, Korlach, Jonas
Publicado em 2011

Affy exon tissues: exon levels in normal tissues in human, mouse and rat

Por Pohl, Andrew A., Sugnet, Charles W., Clark, Tyson A., Smith, Kayla, Fujita, Pauline A., Cline, Melissa S.
Publicado em 2009

A comparative analysis of methylome profiles of Campylobacter jejuni sheep abortion isolate and gastroenteric strains using PacBio data

Por Mou, Kathy T., Muppirala, Usha K., Severin, Andrew J., Clark, Tyson A., Boitano, Matthew, Plummer, Paul J.
Publicado no Front Microbiol (2015)

Enhanced 5-methylcytosine detection in single-molecule, real-time sequencing via Tet1 oxidation

Por Clark, Tyson A, Lu, Xingyu, Luong, Khai, Dai, Qing, Boitano, Matthew, Turner, Stephen W, He, Chuan, Korlach, Jonas
Publicado em 2013

Whole-Genome Assembly of Klebsiella pneumoniae Coproducing NDM-1 and OXA-232 Carbapenemases Using Single-Molecule, Real-Time Sequencing

Por Doi, Yohei, Hazen, Tracy H., Boitano, Matthew, Tsai, Yu-Chih, Clark, Tyson A., Korlach, Jonas, Rasko, David A.
Publicado em 2014

Novel m4C modification in type I restriction-modification systems

Por Morgan, Richard D., Luyten, Yvette A., Johnson, Samuel A., Clough, Emily M., Clark, Tyson A., Roberts, Richard J.
Publicado no Nucleic Acids Res (2016)

Direct detection of DNA methylation during single-molecule, real-time sequencing

Por Flusberg, Benjamin A., Webster, Dale, Lee, Jessa, Travers, Kevin, Olivares, Eric, Clark, Tyson A., Korlach, Jonas, Turner, Stephen W.
Publicado em 2010

Alternative pre-mRNA splicing switches modulate gene expression in late erythropoiesis

Por Yamamoto, Miki L., Clark, Tyson A., Gee, Sherry L., Kang, Jeong-Ah, Schweitzer, Anthony C., Wickrema, Amittha, Conboy, John G.
Publicado em 2009

Sensitive and specific single-molecule sequencing of 5-hydroxymethylcytosine

Por Song, Chun-Xiao, Clark, Tyson A, Lu, Xing-Yu, Kislyuk, Andrey, Dai, Qing, Turner, Stephen W, He, Chuan, Korlach, Jonas
Publicado em 2011

Discovery of tissue-specific exons using comprehensive human exon microarrays

Por Clark, Tyson A, Schweitzer, Anthony C, Chen, Tina X, Staples, Michelle K, Lu, Gang, Wang, Hui, Williams, Alan, Blume, John E
Publicado em 2007

Genetic Stabilization of the Drug-Resistant PMEN1 Pneumococcus Lineage by Its Distinctive DpnIII Restriction-Modification System

Por Eutsey, Rory A., Powell, Evan, Dordel, Janina, Salter, Susannah J., Clark, Tyson A., Korlach, Jonas, Ehrlich, Garth D., Hiller, N. Luisa
Publicado no mBio (2015)

Analysis of RNA base modification and structural rearrangement by single-molecule real-time detection of reverse transcription

Por Vilfan, Igor D, Tsai, Yu-Chih, Clark, Tyson A, Wegener, Jeffrey, Dai, Qing, Yi, Chengqi, Pan, Tao, Turner, Stephen W, Korlach, Jonas
Publicado em 2013

Covalent Modification of Bacteriophage T4 DNA Inhibits CRISPR-Cas9

Por Bryson, Alexandra L., Hwang, Young, Sherrill-Mix, Scott, Wu, Gary D., Lewis, James D., Black, Lindsay, Clark, Tyson A., Bushman, Frederic D.
Publicado no mBio (2015)

DNA Methylation Assessed by SMRT Sequencing Is Linked to Mutations in Neisseria meningitidis Isolates

Por Sater, Mohamad R. Abdul, Lamelas, Araceli, Wang, Guilin, Clark, Tyson A., Röltgen, Katharina, Mane, Shrikant, Korlach, Jonas, Pluschke, Gerd, Schmid, Christoph D.
Publicado no PLoS One (2015)

Unveiling the complexity of the maize transcriptome by single-molecule long-read sequencing

Por Wang, Bo, Tseng, Elizabeth, Regulski, Michael, Clark, Tyson A, Hon, Ting, Jiao, Yinping, Lu, Zhenyuan, Olson, Andrew, Stein, Joshua C., Ware, Doreen
Publicado no Nat Commun (2016)

Removal of a Single α-Tubulin Gene Intron Suppresses Cell Cycle Arrest Phenotypes of Splicing Factor Mutations in Saccharomyces cerevisiae

Por Burns, C. Geoffrey, Ohi, Ryoma, Mehta, Sapna, O’Toole, Eileen T., Winey, Mark, Clark, Tyson A., Sugnet, Charles W., Ares, Manuel, Gould, Kathleen L.
Publicado em 2002

Characterization of DNA methyltransferase specificities using single-molecule, real-time DNA sequencing

Por Clark, Tyson A., Murray, Iain A., Morgan, Richard D., Kislyuk, Andrey O., Spittle, Kristi E., Boitano, Matthew, Fomenkov, Alexey, Roberts, Richard J., Korlach, Jonas
Publicado em 2012

Complete Genome Sequence of Moraxella catarrhalis Strain CCRI-195ME, Isolated from the Middle Ear

Por Tan, Aimee, Blakeway, Luke V., Bakaletz, Lauren O., Boitano, Matthew, Clark, Tyson A., Korlach, Jonas, Jennings, Michael P., Peak, Ian R., Seib, Kate L.
Publicado no Genome Announc (2017)

Ultraconserved elements are associated with homeostatic control of splicing regulators by alternative splicing and nonsense-mediated decay

Por Ni, Julie Z., Grate, Leslie, Donohue, John Paul, Preston, Christine, Nobida, Naomi, O’Brien, Georgeann, Shiue, Lily, Clark, Tyson A., Blume, John E., Ares, Manuel
Publicado em 2007

A correlation with exon expression approach to identify cis-regulatory elements for tissue-specific alternative splicing

Por Das, Debopriya, Clark, Tyson A., Schweitzer, Anthony, Yamamoto, Miki, Marr, Henry, Arribere, Josh, Minovitsky, Simon, Poliakov, Alexander, Dubchak, Inna, Blume, John E., Conboy, John G.
Publicado em 2007