Gene activity in primary T cells infected with HIV(89.6): intron retention and induction of genomic repeats

Por Sherrill-Mix, Scott, Ocwieja, Karen E., Bushman, Frederic D.
Publicado no Retrovirology (2015)

Hepatitis C Virus Transmission Bottlenecks Analyzed by Deep Sequencing

Por Wang, Gary P., Sherrill-Mix, Scott A., Chang, Kyong-Mi, Quince, Chris, Bushman, Frederic D.
Publicado em 2010

A Reverse Transcription Loop-Mediated Isothermal Amplification Assay Optimized to Detect Multiple HIV Subtypes

Por Ocwieja, Karen E., Sherrill-Mix, Scott, Liu, Changchun, Song, Jinzhao, Bau, Haim, Bushman, Frederic D.
Publicado no PLoS One (2015)

HIV Sequence Variation Associated With env Antisense Adoptive T-cell Therapy in the hNSG Mouse Model

Por Mukherjee, Rithun, Plesa, Gabriela, Sherrill-Mix, Scott, Richardson, Max W, Riley, James L, Bushman, Frederic D
Publicado em 2010

Power and sample-size estimation for microbiome studies using pairwise distances and PERMANOVA

Por Kelly, Brendan J., Gross, Robert, Bittinger, Kyle, Sherrill-Mix, Scott, Lewis, James D., Collman, Ronald G., Bushman, Frederic D., Li, Hongzhe
Publicado no Bioinformatics (2015)

Covalent Modification of Bacteriophage T4 DNA Inhibits CRISPR-Cas9

Por Bryson, Alexandra L., Hwang, Young, Sherrill-Mix, Scott, Wu, Gary D., Lewis, James D., Black, Lindsay, Clark, Tyson A., Bushman, Frederic D.
Publicado no mBio (2015)

High Fat Diet Determines the Composition of the Murine Gut Microbiome Independently of Obesity

Por Hildebrandt, Marie A., Hoffman, Christian, Sherrill-Mix, Scott A., Keilbaugh, Sue A., Hamady, Micah, Chen, Ying-Yu, Knight, Rob, Ahima, Rexford S., Bushman, Frederic, Wu, Gary D.
Publicado em 2009

U1 snRNP Determines mRNA Length and Regulates Isoform Expression

Por Berg, Michael G., Singh, Larry N., Younis, Ihab, Liu, Qiang, Pinto, Anna Maria, Kaida, Daisuke, Zhang, Zhenxi, Cho, Sungchan, Sherrill-Mix, Scott, Wan, Lili, Dreyfuss, Gideon
Publicado em 2012

Comparison of placenta samples with contamination controls does not provide evidence for a distinct placenta microbiota

Por Lauder, Abigail P., Roche, Aoife M., Sherrill-Mix, Scott, Bailey, Aubrey, Laughlin, Alice L., Bittinger, Kyle, Leite, Rita, Elovitz, Michal A., Parry, Samuel, Bushman, Frederic D.
Publicado no Microbiome (2016)

Phylogeography and Molecular Epidemiology of an Epidemic Strain of Dengue Virus Type 1 in Sri Lanka

Por Ocwieja, Karen E., Fernando, Anira N., Sherrill-Mix, Scott, Sundararaman, Sesh A., Tennekoon, Rashika N., Tippalagama, Rashmi, Krishnananthasivam, Shivankari, Premawansa, Gayani, Premawansa, Sunil, De Silva, Aruna Dharshan
Publicado em 2014

Associations of the vaginal microbiota with HIV infection, bacterial vaginosis and demographic factors

Por Chehoud, Christel, Stieh, Daniel J., Bailey, Aubrey G., Laughlin, Alice L., Allen, Shannon A., McCotter, Kerrie L., Sherrill-Mix, Scott A., Hope, Thomas J., Bushman, Frederic D.
Publicado no AIDS (2017)

Dynamic regulation of HIV-1 mRNA populations analyzed by single-molecule enrichment and long-read sequencing

Por Ocwieja, Karen E., Sherrill-Mix, Scott, Mukherjee, Rithun, Custers-Allen, Rebecca, David, Patricia, Brown, Michael, Wang, Susana, Link, Darren R., Olson, Jeff, Travers, Kevin, Schadt, Eric, Bushman, Frederic D.
Publicado em 2012

Structural Basis for Inhibitor-Induced Aggregation of HIV Integrase

Por Gupta, Kushol, Turkki, Vesa, Sherrill-Mix, Scott, Hwang, Young, Eilers, Grant, Taylor, Louis, McDanal, Charlene, Wang, Ping, Temelkoff, David, Nolte, Robert T., Velthuisen, Emile, Jeffrey, Jerry, Van Duyne, Gregory D., Bushman, Frederic D.
Publicado no PLoS Biol (2016)

A tool kit for quantifying eukaryotic rRNA gene sequences from human microbiome samples

Por Dollive, Serena, Peterfreund, Gregory L, Sherrill-Mix, Scott, Bittinger, Kyle, Sinha, Rohini, Hoffmann, Christian, Nabel, Christopher S, Hill, David A, Artis, David, Bachman, Michael A, Custers-Allen, Rebecca, Grunberg, Stephanie, Wu, Gary D, Lewis, James D, Bushman, Frederic D
Publicado em 2012

HIV latency and integration site placement in five cell-based models

Por Sherrill-Mix, Scott, Lewinski, Mary K, Famiglietti, Marylinda, Bosque, Alberto, Malani, Nirav, Ocwieja, Karen E, Berry, Charles C, Looney, David, Shan, Liang, Agosto, Luis M, Pace, Matthew J, Siliciano, Robert F, O’Doherty, Una, Guatelli, John, Planelles, Vicente, Bushman, Frederic D
Publicado em 2013

Resistance to type 1 interferons is a major determinant of HIV-1 transmission fitness

Por Iyer, Shilpa S., Bibollet-Ruche, Frederic, Sherrill-Mix, Scott, Learn, Gerald H., Plenderleith, Lindsey, Smith, Andrew G., Barbian, Hannah J., Russell, Ronnie M., Gondim, Marcos V. P., Bahari, Catherine Y., Shaw, Christiana M., Li, Yingying, Decker, Timothy, Haynes, Barton F., Shaw, George M., Sharp, Paul M., Borrow, Persephone, Hahn, Beatrice H.
Publicado no Proc Natl Acad Sci U S A (2017)

Plasmodium falciparum-like parasites infecting wild apes in southern Cameroon do not represent a recurrent source of human malaria

Por Sundararaman, Sesh A., Liu, Weimin, Keele, Brandon F., Learn, Gerald H., Bittinger, Kyle, Mouacha, Fatima, Ahuka-Mundeke, Steve, Manske, Magnus, Sherrill-Mix, Scott, Li, Yingying, Malenke, Jordan A., Delaporte, Eric, Laurent, Christian, Mpoudi Ngole, Eitel, Kwiatkowski, Dominic P., Shaw, George M., Rayner, Julian C., Peeters, Martine, Sharp, Paul M., Bushman, Frederic D., Hahn, Beatrice H.
Publicado em 2013

Engineering HIV-Resistant Human CD4+ T Cells with CXCR4-Specific Zinc-Finger Nucleases

Por Wilen, Craig B., Wang, Jianbin, Tilton, John C., Miller, Jeffrey C., Kim, Kenneth A., Rebar, Edward J., Sherrill-Mix, Scott A., Patro, Sean C., Secreto, Anthony J., Jordan, Andrea P. O., Lee, Gary, Kahn, Joshua, Aye, Pyone P., Bunnell, Bruce A., Lackner, Andrew A., Hoxie, James A., Danet-Desnoyers, Gwenn A., Bushman, Frederic D., Riley, James L., Gregory, Philip D., June, Carl H., Holmes, Michael C., Doms, Robert W.
Publicado em 2011