Cracking the epitranscriptome

od Schwartz, Schraga
Wydane w RNA (2016)

m(1)A within cytoplasmic mRNAs at single nucleotide resolution: a reconciled transcriptome-wide map

od Schwartz, Schraga
Wydane w RNA (2018)

Chromatin density and splicing destiny: on the cross-talk between chromatin structure and splicing

od Schwartz, Schraga, Ast, Gil
Wydane 2010

Next-generation sequencing technologies for detection of modified nucleotides in RNAs

od Schwartz, Schraga, Motorin, Yuri
Wydane w RNA Biol (2016)

Multifactorial Interplay Controls the Splicing Profile of Alu-Derived Exons

od Ram, Oren, Schwartz, Schraga, Ast, Gil
Wydane 2008

SROOGLE: webserver for integrative, user-friendly visualization of splicing signals

od Schwartz, Schraga, Hall, Eitan, Ast, Gil
Wydane 2009

Large-scale discovery of insertion hotspots and preferential integration sites of human transposed elements

od Levy, Asaf, Schwartz, Schraga, Ast, Gil
Wydane 2010

Detection and Removal of Biases in the Analysis of Next-Generation Sequencing Reads

od Schwartz, Schraga, Oren, Ram, Ast, Gil
Wydane 2011

Alternative splicing of Alu exons—two arms are better than one

od Gal-Mark, Nurit, Schwartz, Schraga, Ast, Gil
Wydane 2008

Transcriptome-wide discovery of circular RNAs in Archaea

od Danan, Miri, Schwartz, Schraga, Edelheit, Sarit, Sorek, Rotem
Wydane 2012

The Pivotal Roles of TIA Proteins in 5′ Splice-Site Selection of Alu Exons and Across Evolution

od Gal-Mark, Nurit, Schwartz, Schraga, Ram, Oren, Eyras, Eduardo, Ast, Gil
Wydane 2009

Transcriptome-Wide Mapping of 5-methylcytidine RNA Modifications in Bacteria, Archaea, and Yeast Reveals m(5)C within Archaeal mRNAs

od Edelheit, Sarit, Schwartz, Schraga, Mumbach, Maxwell R., Wurtzel, Omri, Sorek, Rotem
Wydane 2013

TRUB1 is the predominant pseudouridine synthase acting on mammalian mRNA via a predictable and conserved code

od Safra, Modi, Nir, Ronit, Farouq, Daneyal, Slutzkin, Ilya Vainberg, Schwartz, Schraga
Wydane w Genome Res (2017)

Corrigendum: TRUB1 is the predominant pseudouridine synthase acting on mammalian mRNA via a predictable and conserved code

od Safra, Modi, Nir, Ronit, Farouq, Daneyal, Vainberg Slutskin, Ilya, Schwartz, Schraga
Wydane w Genome Res (2017)

Large-scale comparative analysis of splicing signals and their corresponding splicing factors in eukaryotes

od Schwartz, Schraga, Silva, João, Burstein, David, Pupko, Tal, Eyras, Eduardo, Ast, Gil
Wydane 2008

Alu Exonization Events Reveal Features Required for Precise Recognition of Exons by the Splicing Machinery

od Schwartz, Schraga, Gal-Mark, Nurit, Kfir, Nir, Oren, Ram, Kim, Eddo, Ast, Gil
Wydane 2009

Changes in exon–intron structure during vertebrate evolution affect the splicing pattern of exons

od Gelfman, Sahar, Burstein, David, Penn, Osnat, Savchenko, Anna, Amit, Maayan, Schwartz, Schraga, Pupko, Tal, Ast, Gil
Wydane 2012

RNA editing in bacteria recodes multiple proteins and regulates an evolutionarily conserved toxin-antitoxin system

od Bar-Yaacov, Dan, Mordret, Ernest, Towers, Ruth, Biniashvili, Tammy, Soyris, Clara, Schwartz, Schraga, Dahan, Orna, Pilpel, Yitzhak
Wydane w Genome Res (2017)

Quantitative visualization of alternative exon expression from RNA-seq data

od Katz, Yarden, Wang, Eric T., Silterra, Jacob, Schwartz, Schraga, Wong, Bang, Thorvaldsdóttir, Helga, Robinson, James T., Mesirov, Jill P., Airoldi, Edoardo M., Burge, Christopher B.
Wydane w Bioinformatics (2015)

A network-based analysis of colon cancer splicing changes reveals a tumorigenesis-favoring regulatory pathway emanating from ELK1

od Hollander, Dror, Donyo, Maya, Atias, Nir, Mekahel, Keren, Melamed, Zeev, Yannai, Sivan, Lev-Maor, Galit, Shilo, Asaf, Schwartz, Schraga, Barshack, Iris, Sharan, Roded, Ast, Gil
Wydane w Genome Res (2016)