Cracking the epitranscriptome

Por Schwartz, Schraga
Publicado no RNA (2016)

Chromatin density and splicing destiny: on the cross-talk between chromatin structure and splicing

Por Schwartz, Schraga, Ast, Gil
Publicado em 2010

Multifactorial Interplay Controls the Splicing Profile of Alu-Derived Exons

Por Ram, Oren, Schwartz, Schraga, Ast, Gil
Publicado em 2008

SROOGLE: webserver for integrative, user-friendly visualization of splicing signals

Por Schwartz, Schraga, Hall, Eitan, Ast, Gil
Publicado em 2009

Large-scale discovery of insertion hotspots and preferential integration sites of human transposed elements

Por Levy, Asaf, Schwartz, Schraga, Ast, Gil
Publicado em 2010

Detection and Removal of Biases in the Analysis of Next-Generation Sequencing Reads

Por Schwartz, Schraga, Oren, Ram, Ast, Gil
Publicado em 2011

Alternative splicing of Alu exons—two arms are better than one

Por Gal-Mark, Nurit, Schwartz, Schraga, Ast, Gil
Publicado em 2008

Transcriptome-wide discovery of circular RNAs in Archaea

Por Danan, Miri, Schwartz, Schraga, Edelheit, Sarit, Sorek, Rotem
Publicado em 2012

The Pivotal Roles of TIA Proteins in 5′ Splice-Site Selection of Alu Exons and Across Evolution

Por Gal-Mark, Nurit, Schwartz, Schraga, Ram, Oren, Eyras, Eduardo, Ast, Gil
Publicado em 2009

Transcriptome-Wide Mapping of 5-methylcytidine RNA Modifications in Bacteria, Archaea, and Yeast Reveals m(5)C within Archaeal mRNAs

Por Edelheit, Sarit, Schwartz, Schraga, Mumbach, Maxwell R., Wurtzel, Omri, Sorek, Rotem
Publicado em 2013

TRUB1 is the predominant pseudouridine synthase acting on mammalian mRNA via a predictable and conserved code

Por Safra, Modi, Nir, Ronit, Farouq, Daneyal, Slutzkin, Ilya Vainberg, Schwartz, Schraga
Publicado no Genome Res (2017)

Large-scale comparative analysis of splicing signals and their corresponding splicing factors in eukaryotes

Por Schwartz, Schraga, Silva, João, Burstein, David, Pupko, Tal, Eyras, Eduardo, Ast, Gil
Publicado em 2008

Alu Exonization Events Reveal Features Required for Precise Recognition of Exons by the Splicing Machinery

Por Schwartz, Schraga, Gal-Mark, Nurit, Kfir, Nir, Oren, Ram, Kim, Eddo, Ast, Gil
Publicado em 2009

Changes in exon–intron structure during vertebrate evolution affect the splicing pattern of exons

Por Gelfman, Sahar, Burstein, David, Penn, Osnat, Savchenko, Anna, Amit, Maayan, Schwartz, Schraga, Pupko, Tal, Ast, Gil
Publicado em 2012

Quantitative visualization of alternative exon expression from RNA-seq data

Por Katz, Yarden, Wang, Eric T., Silterra, Jacob, Schwartz, Schraga, Wong, Bang, Thorvaldsdóttir, Helga, Robinson, James T., Mesirov, Jill P., Airoldi, Edoardo M., Burge, Christopher B.
Publicado no Bioinformatics (2015)

A network-based analysis of colon cancer splicing changes reveals a tumorigenesis-favoring regulatory pathway emanating from ELK1

Por Hollander, Dror, Donyo, Maya, Atias, Nir, Mekahel, Keren, Melamed, Zeev, Yannai, Sivan, Lev-Maor, Galit, Shilo, Asaf, Schwartz, Schraga, Barshack, Iris, Sharan, Roded, Ast, Gil
Publicado no Genome Res (2016)

Position-dependent alternative splicing activity revealed by global profiling of alternative splicing events regulated by PTB

Por Llorian, Miriam, Schwartz, Schraga, Clark, Tyson A., Hollander, Dror, Tan, Lit-Yeen, Spellman, Rachel, Gordon, Adele, Schweitzer, Anthony C., de la Grange, Pierre, Ast, Gil, Smith, Christopher WJ
Publicado em 2010

Transcriptome-wide mapping reveals widespread dynamic regulated pseudouridylation of ncRNA and mRNA

Por Schwartz, Schraga, Bernstein, Douglas A., Mumbach, Maxwell R., Jovanovic, Marko, Herbst, Rebecca H., León-Ricardo, Brian X., Engreitz, Jesse M., Guttman, Mitchell, Satija, Rahul, Lander, Eric S., Fink, Gerald, Regev, Aviv
Publicado em 2014

High-resolution mapping reveals a conserved, widespread, dynamic meiotically regulated mRNA methylation program

Por Schwartz, Schraga, Agarwala, Sudeep D., Mumbach, Maxwell R., Jovanovic, Marko, Mertins, Philipp, Shishkin, Alexander, Tabach, Yuval, Mikkelsen, Tarjei S, Satija, Rahul, Ruvkun, Gary, Carr, Steven A., Lander, Eric S., Fink, Gerald R., Regev, Aviv
Publicado em 2013

Dynamic profiling of the protein life cycle in response to pathogens

Por Jovanovic, Marko, Rooney, Michael S., Mertins, Philipp, Przybylski, Dariusz, Chevrier, Nicolas, Satija, Rahul, Rodriguez, Edwin H., Fields, Alexander P., Schwartz, Schraga, Raychowdhury, Raktima, Mumbach, Maxwell R., Eisenhaure, Thomas, Rabani, Michal, Gennert, Dave, Lu, Diana, Delorey, Toni, Weissman, Jonathan S., Carr, Steven A., Hacohen, Nir, Regev, Aviv
Publicado no Science (2015)