De novo assembly and validation of planaria transcriptome by massive parallel sequencing and shotgun proteomics

Freshwater planaria are a very attractive model system for stem cell biology, tissue homeostasis, and regeneration. The genome of the planarian Schmidtea mediterranea has recently been sequenced and is estimated to contain >20,000 protein-encoding genes. However, the characterization of its trans...

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Hauptverfasser: Adamidi, Catherine, Wang, Yongbo, Gruen, Dominic, Mastrobuoni, Guido, You, Xintian, Tolle, Dominic, Dodt, Matthias, Mackowiak, Sebastian D., Gogol-Doering, Andreas, Oenal, Pinar, Rybak, Agnieszka, Ross, Eric, Alvarado, Alejandro Sánchez, Kempa, Stefan, Dieterich, Christoph, Rajewsky, Nikolaus, Chen, Wei
Format: Artigo
Sprache:Inglês
Veröffentlicht: Cold Spring Harbor Laboratory Press 2011
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Online Zugang:https://ncbi.nlm.nih.gov/pmc/articles/PMC3129261/
https://ncbi.nlm.nih.gov/pubmed/21536722
https://ncbi.nlm.nih.govhttp://dx.doi.org/10.1101/gr.113779.110
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