SeqPlots - Interactive software for exploratory data analyses, pattern discovery and visualization in genomics

Por Stempor, Przemyslaw, Ahringer, Julie
Publicado no Wellcome Open Res (2016)

MMpred: functional miRNA – mRNA interaction analyses by miRNA expression prediction

Por Stempor, Przemyslaw A, Cauchi, Michael, Wilson, Paul
Publicado em 2012

An Alternative STAT Signaling Pathway Acts in Viral Immunity in Caenorhabditis elegans

Por Tanguy, Mélanie, Véron, Louise, Stempor, Przemyslaw, Ahringer, Julie, Sarkies, Peter, Miska, Eric A.
Publicado no mBio (2017)

The Caenorhabditis elegans homolog of the Evi1 proto-oncogene, egl-43, coordinates G1 cell cycle arrest with pro-invasive gene expression during anchor cell invasion

Por Deng, Ting, Stempor, Przemyslaw, Appert, Alex, Daube, Michael, Ahringer, Julie, Hajnal, Alex, Lattmann, Evelyn
Publicado no PLoS Genet (2020)

Stable Caenorhabditis elegans chromatin domains separate broadly expressed and developmentally regulated genes

Por Evans, Kenneth J., Huang, Ni, Stempor, Przemyslaw, Chesney, Michael A., Down, Thomas A., Ahringer, Julie
Publicado no Proc Natl Acad Sci U S A (2016)

Comprehensive Analysis of Correlations in the Expression of miRNA Genes and Immune Checkpoint Genes in Bladder Cancer Cells

Por Stempor, Przemysław A., Avni, Dror, Leibowitz, Raya, Sidi, Yechezkel, Stępień, Maria, Dzieciątkowski, Tomasz, Dobosz, Paula
Publicado no Int J Mol Sci (2021)

Extreme HOT regions are CpG-dense promoters in C. elegans and humans

Por Chen, Ron A.-J., Stempor, Przemyslaw, Down, Thomas A., Zeiser, Eva, Feuer, Sky K., Ahringer, Julie
Publicado em 2014

The DREAM complex promotes gene body H2A.Z for target repression

Por Latorre, Isabel, Chesney, Michael A., Garrigues, Jacob M., Stempor, Przemyslaw, Appert, Alex, Francesconi, Mirko, Strome, Susan, Ahringer, Julie
Publicado no Genes Dev (2015)

Checkpoint Genes at the Cancer Side of the Immunological Synapse in Bladder Cancer

Por Dobosz, Paula, Stempor, Przemysław A., Roszik, Jason, Herman, Amir, Layani, Adi, Berger, Raanan, Avni, Dror, Sidi, Yechezkel, Leibowitz-Amit, Raya
Publicado no Transl Oncol (2019)

The landscape of RNA polymerase II transcription initiation in C. elegans reveals promoter and enhancer architectures

Por Chen, Ron A.-J., Down, Thomas A., Stempor, Przemyslaw, Chen, Q. Brent, Egelhofer, Thea A., Hillier, LaDeana W., Jeffers, Tess E., Ahringer, Julie
Publicado em 2013

A team of heterochromatin factors collaborates with small RNA pathways to combat repetitive elements and germline stress

Por McMurchy, Alicia N, Stempor, Przemyslaw, Gaarenstroom, Tessa, Wysolmerski, Brian, Dong, Yan, Aussianikava, Darya, Appert, Alex, Huang, Ni, Kolasinska-Zwierz, Paulina, Sapetschnig, Alexandra, Miska, Eric A, Ahringer, Julie
Publicado no eLife (2017)

Correction: A team of heterochromatin factors collaborates with small RNA pathways to combat repetitive elements and germline stress

Por McMurchy, Alicia N, Stempor, Przemyslaw, Gaarenstroom, Tessa, Wysolmerski, Brian, Dong, Yan, Aussianikava, Darya, Appert, Alex, Huang, Ni, Kolasinska-Zwierz, Paulina, Sapetschnig, Alexandra, Miska, Eric A, Ahringer, Julie
Publicado no eLife (2017)

Chromatin accessibility dynamics across C. elegans development and ageing

Por Jänes, Jürgen, Dong, Yan, Schoof, Michael, Serizay, Jacques, Appert, Alex, Cerrato, Chiara, Woodbury, Carson, Chen, Ron, Gemma, Carolina, Huang, Ni, Kissiov, Djem, Stempor, Przemyslaw, Steward, Annette, Zeiser, Eva, Sauer, Sascha, Ahringer, Julie
Publicado no eLife (2018)

Physical and functional interaction between SET1/COMPASS complex component CFP-1 and a Sin3S HDAC complex in C. elegans

Por Beurton, Flore, Stempor, Przemyslaw, Caron, Matthieu, Appert, Alex, Dong, Yan, Chen, Ron A-j, Cluet, David, Couté, Yohann, Herbette, Marion, Huang, Ni, Polveche, Hélène, Spichty, Martin, Bedet, Cécile, Ahringer, Julie, Palladino, Francesca
Publicado no Nucleic Acids Res (2019)

H4K20me1 Contributes to Downregulation of X-Linked Genes for C. elegans Dosage Compensation

Por Vielle, Anne, Lang, Jackie, Dong, Yan, Ercan, Sevinc, Kotwaliwale, Chitra, Rechtsteiner, Andreas, Appert, Alex, Chen, Q. Brent, Dose, Andrea, Egelhofer, Thea, Kimura, Hiroshi, Stempor, Przemyslaw, Dernburg, Abby, Lieb, Jason D., Strome, Susan, Ahringer, Julie
Publicado em 2012

The USTC co-opts an ancient machinery to drive piRNA transcription in C. elegans

Por Weng, Chenchun, Kosalka, Joanna, Berkyurek, Ahmet C., Stempor, Przemyslaw, Feng, Xuezhu, Mao, Hui, Zeng, Chenming, Li, Wen-Jun, Yan, Yong-Hong, Dong, Meng-Qiu, Morero, Natalia Rosalía, Zuliani, Cecilia, Barabas, Orsolya, Ahringer, Julie, Guang, Shouhong, Miska, Eric A.
Publicado no Genes Dev (2019)

Comparative analysis of metazoan chromatin organization

Por Ho, Joshua W. K., Jung, Youngsook L., Liu, Tao, Alver, Burak H., Lee, Soohyun, Ikegami, Kohta, Sohn, Kyung-Ah, Minoda, Aki, Tolstorukov, Michael Y., Appert, Alex, Parker, Stephen C. J., Gu, Tingting, Kundaje, Anshul, Riddle, Nicole C., Bishop, Eric, Egelhofer, Thea A., Hu, Sheng’en Shawn, Alekseyenko, Artyom A., Rechtsteiner, Andreas, Asker, Dalal, Belsky, Jason A., Bowman, Sarah K., Chen, Q. Brent, Chen, Ron A-J, Day, Daniel S., Dong, Yan, Dose, Andrea C., Duan, Xikun, Epstein, Charles B., Ercan, Sevinc, Feingold, Elise A., Ferrari, Francesco, Garrigues, Jacob M., Gehlenborg, Nils, Good, Peter J., Haseley, Psalm, He, Daniel, Herrmann, Moritz, Hoffman, Michael M., Jeffers, Tess E., Kharchenko, Peter V., Kolasinska-Zwierz, Paulina, Kotwaliwale, Chitra V., Kumar, Nischay, Langley, Sasha A., Larschan, Erica N., Latorre, Isabel, Libbrecht, Maxwell W., Lin, Xueqiu, Park, Richard, Pazin, Michael J., Pham, Hoang N., Plachetka, Annette, Qin, Bo, Schwartz, Yuri B., Shoresh, Noam, Stempor, Przemyslaw, Vielle, Anne, Wang, Chengyang, Whittle, Christina M., Xue, Huiling, Kingston, Robert E., Kim, Ju Han, Bernstein, Bradley E., Dernburg, Abby F., Pirrotta, Vincenzo, Kuroda, Mitzi I., Noble, William S., Tullius, Thomas D., Kellis, Manolis, MacAlpine, David M., Strome, Susan, Elgin, Sarah C. R., Liu, Xiaole Shirley, Lieb, Jason D., Ahringer, Julie, Karpen, Gary H., Park, Peter J.
Publicado no Nature (2014)