Specification of Regions of DNA Replication Initiation during Embryogenesis in the 65-Kilobase DNApolα-dE2F Locus of Drosophila melanogaster

по Sasaki, Takayo, Sawado, Tomoyuki, Yamaguchi, Masamitsu, Shinomiya, Tomoyuki
Опубликовано 1999

High-resolution Repli-Seq defines the temporal choreography of initiation, elongation and termination of replication in mammalian cells

по Zhao, Peiyao A., Sasaki, Takayo, Gilbert, David M.
Опубликовано в: Genome Biol (2020)

The Chinese Hamster Dihydrofolate Reductase Replication Origin Decision Point Follows Activation of Transcription and Suppresses Initiation of Replication within Transcription Unit...

по Sasaki, Takayo, Ramanathan, Sunita, Okuno, Yukiko, Kumagai, Chiharu, Shaikh, Seemab S., Gilbert, David M.
Опубликовано 2006

Evidence for a mammalian late-G(1) phase inhibitor of replication licensing distinct from geminin or Cdk activity

по Sasaki, Takayo, Li, Anatoliy, Gillespie, Peter J, Blow, J Julian, Gilbert, David M
Опубликовано 2011

Influence of ATM-Mediated DNA Damage Response on Genomic Variation in Human Induced Pluripotent Stem Cells

по Lu, Junjie, Li, Hu, Baccei, Anna, Sasaki, Takayo, Gilbert, David M., Lerou, Paul H.
Опубликовано в: Stem Cells Dev (2016)

Replication Timing: A Fingerprint for Cell Identity and Pluripotency

по Ryba, Tyrone, Hiratani, Ichiro, Sasaki, Takayo, Battaglia, Dana, Kulik, Michael, Zhang, Jinfeng, Dalton, Stephen, Gilbert, David M.
Опубликовано 2011

Continuous-trait probabilistic model for comparing multi-species functional genomic data

по Yang, Yang, Gu, Quanquan, Zhang, Yang, Sasaki, Takayo, Crivello, Julianna, O’Neill, Rachel J., Gilbert, David M., Ma, Jian
Опубликовано в: Cell Syst (2018)

Development and Validation of a Data-Based Food Frequency Questionnaire for Adults in Eastern Rural Area of Rwanda

по Yanagisawa, Ayumi, Sudo, Noriko, Amitani, Yukiko, Caballero, Yuko, Sekiyama, Makiko, Mukamugema, Christine, Matsuoka, Takuya, Imanishi, Hiroaki, Sasaki, Takayo, Matsuda, Hirotaka
Опубликовано в: Nutr Metab Insights (2016)

The distribution of genomic variations in human iPSCs is related to replication timing reorganization during reprogramming

по Lu, Junjie, Li, Hu, Hu, Ming, Sasaki, Takayo, Baccei, Anna, Gilber, David M., Liu, Jun S., Collins, James J., Lerou, Paul H.
Опубликовано 2014

3D genome organization contributes to genome instability at fragile sites

по Sarni, Dan, Sasaki, Takayo, Irony Tur-Sinai, Michal, Miron, Karin, Rivera-Mulia, Juan Carlos, Magnuson, Brian, Ljungman, Mats, Gilbert, David M., Kerem, Batsheva
Опубликовано в: Nat Commun (2020)

Highly stable loading of Mcm proteins onto chromatin in living cells requires replication to unload

по Kuipers, Marjorie A., Stasevich, Timothy J., Sasaki, Takayo, Wilson, Korey A., Hazelwood, Kristin L., McNally, James G., Davidson, Michael W., Gilbert, David M.
Опубликовано 2011

Allele-specific control of replication timing and genome organization during development

по Rivera-Mulia, Juan Carlos, Dimond, Andrew, Vera, Daniel, Trevilla-Garcia, Claudia, Sasaki, Takayo, Zimmerman, Jared, Dupont, Catherine, Gribnau, Joost, Fraser, Peter, Gilbert, David M.
Опубликовано в: Genome Res (2018)

Genome-wide analysis of replication timing by next-generation sequencing with E/L Repli-seq

по Marchal, Claire, Sasaki, Takayo, Vera, Daniel, Wilson, Korey, Sima, Jiao, Rivera-Mulia, Juan Carlos, Trevilla-García, Claudia, Nogues, Coralin, Nafie, Ebtesam, Gilbert, David M.
Опубликовано в: Nat Protoc (2018)

Pre-replication complex proteins assemble at regions of low nucleosome occupancy within the Chinese hamster dihydrofolate reductase initiation zone

по Lubelsky, Yoav, Sasaki, Takayo, Kuipers, Marjorie A., Lucas, Isabelle, Le Beau, Michelle M., Carignon, Sandra, Debatisse, Michelle, Prinz, Joseph A., Dennis, Jonathan H., Gilbert, David M.
Опубликовано 2011

DNA replication timing alterations identify common markers between distinct progeroid diseases

по Rivera-Mulia, Juan Carlos, Desprat, Romain, Trevilla-Garcia, Claudia, Cornacchia, Daniela, Schwerer, Hélène, Sasaki, Takayo, Sima, Jiao, Fells, Tyler, Studer, Lorenz, Lemaitre, Jean-Marc, Gilbert, David M.
Опубликовано в: Proc Natl Acad Sci U S A (2017)

SPIN reveals genome-wide landscape of nuclear compartmentalization

по Wang, Yuchuan, Zhang, Yang, Zhang, Ruochi, van Schaik, Tom, Zhang, Liguo, Sasaki, Takayo, Peric-Hupkes, Daniel, Chen, Yu, Gilbert, David M., van Steensel, Bas, Belmont, Andrew S., Ma, Jian
Опубликовано в: Genome Biol (2021)

Murine esBAF chromatin remodeling complex subunits BAF250a and Brg1 are necessary to maintain and reprogram pluripotency-specific replication timing of select replication domains

по Takebayashi, Shin-ichiro, Lei, Ienglam, Ryba, Tyrone, Sasaki, Takayo, Dileep, Vishnu, Battaglia, Dana, Gao, Xiaolin, Fang, Peng, Fan, Yong, Esteban, Miguel A, Tang, Jiong, Crabtree, Gerald R, Wang, Zhong, Gilbert, David M
Опубликовано 2013

Stability of patient-specific features of altered DNA replication timing in xenografts of primary human acute lymphoblastic leukemia

по Sasaki, Takayo, Rivera-Mulia, Juan Carlos, Vera, Daniel, Zimmerman, Jared, Das, Sunny, Padget, Michelle, Nakamichi, Naoto, Chang, Bill H., Tyner, Jeff, Druker, Brian J., Weng, Andrew P., Civin, Curt I., Eaves, Connie J., Gilbert, David M.
Опубликовано в: Exp Hematol (2017)

Dynamic changes in replication timing and gene expression during lineage specification of human pluripotent stem cells

по Rivera-Mulia, Juan Carlos, Buckley, Quinton, Sasaki, Takayo, Zimmerman, Jared, Didier, Ruth A., Nazor, Kristopher, Loring, Jeanne F., Lian, Zheng, Weissman, Sherman, Robins, Allan J., Schulz, Thomas C., Menendez, Laura, Kulik, Michael J., Dalton, Stephen, Gabr, Haitham, Kahveci, Tamer, Gilbert, David M.
Опубликовано в: Genome Res (2015)

Replication timing alterations in leukemia affect clinically relevant chromosome domains

по Rivera-Mulia, Juan Carlos, Sasaki, Takayo, Trevilla-Garcia, Claudia, Nakamichi, Naoto, Knapp, David J. H. F., Hammond, Colin A., Chang, Bill H., Tyner, Jeffrey W., Devidas, Meenakshi, Zimmerman, Jared, Klein, Kyle N., Somasundaram, Vivek, Druker, Brian J., Gruber, Tanja A., Koren, Amnon, Eaves, Connie J., Gilbert, David M.
Опубликовано в: Blood Adv (2019)