Comparison of Sequencing Platforms for Single Nucleotide Variant Calls in a Human Sample

di Ratan, Aakrosh, Miller, Webb, Guillory, Joseph, Stinson, Jeremy, Seshagiri, Somasekar, Schuster, Stephan C.
Pubblicazione 2013

Deep Sequencing-guided Design of a High Affinity Dual Specificity Antibody to Target Two Angiogenic Factors in Neovascular Age-related Macular Degeneration

di Koenig, Patrick, Lee, Chingwei V., Sanowar, Sarah, Wu, Ping, Stinson, Jeremy, Harris, Seth F., Fuh, Germaine
Pubblicato in J Biol Chem (2015)

Mutational landscape of antibody variable domains reveals a switch modulating the interdomain conformational dynamics and antigen binding

di Koenig, Patrick, Lee, Chingwei V., Walters, Benjamin T., Janakiraman, Vasantharajan, Stinson, Jeremy, Patapoff, Thomas W., Fuh, Germaine
Pubblicato in Proc Natl Acad Sci U S A (2017)

De Novo MS/MS Sequencing of Native Human Antibodies

di Guthals, Adrian, Gan, Yutian, Murray, Laura, Chen, Yongmei, Stinson, Jeremy, Nakamura, Gerald, Lill, Jennie R, Sandoval, Wendy, Bandeira, Nuno
Pubblicato in J Proteome Res (2016)

Cloning and characterization of IL-17B and IL-17C, two new members of the IL-17 cytokine family

di Li, Hanzhong, Chen, Jian, Huang, Arthur, Stinson, Jeremy, Heldens, Sherry, Foster, Jessica, Dowd, Patrick, Gurney, Austin L., Wood, William I.
Pubblicazione 2000

IgRepertoireConstructor: a novel algorithm for antibody repertoire construction and immunoproteogenomics analysis

di Safonova, Yana, Bonissone, Stefano, Kurpilyansky, Eugene, Starostina, Ekaterina, Lapidus, Alla, Stinson, Jeremy, DePalatis, Laura, Sandoval, Wendy, Lill, Jennie, Pevzner, Pavel A.
Pubblicato in Bioinformatics (2015)

Deep RNA sequencing analysis of readthrough gene fusions in human prostate adenocarcinoma and reference samples

di Nacu, Serban, Yuan, Wenlin, Kan, Zhengyan, Bhatt, Deepali, Rivers, Celina Sanchez, Stinson, Jeremy, Peters, Brock A, Modrusan, Zora, Jung, Kenneth, Seshagiri, Somasekar, Wu, Thomas D
Pubblicazione 2011

A Mouse Model of Hepatocellular Carcinoma : Ectopic Expression of Fibroblast Growth Factor 19 in Skeletal Muscle of Transgenic Mice

di Nicholes, Katrina, Guillet, Susan, Tomlinson, Elizabeth, Hillan, Kenneth, Wright, Barbara, Frantz, Gretchen D., Pham, Thinh A., Dillard-Telm, Lisa, Tsai, Siao Ping, Stephan, Jean-Philippe, Stinson, Jeremy, Stewart, Timothy, French, Dorothy M.
Pubblicazione 2002

­­­Silencing of retrotransposons by SETDB1 inhibits the interferon response in acute myeloid leukemia­­

di Cuellar, Trinna L., Herzner, Anna-Maria, Zhang, Xiaotian, Goyal, Yogesh, Watanabe, Colin, Friedman, Brad A., Janakiraman, Vasantharajan, Durinck, Steffen, Stinson, Jeremy, Arnott, David, Cheung, Tommy K., Chaudhuri, Subhra, Modrusan, Zora, Doerr, Jonas Martin, Classon, Marie, Haley, Benjamin
Pubblicato in J Cell Biol (2017)

A broadly protective therapeutic antibody against influenza B virus with two mechanisms of action

di Chai, Ning, Swem, Lee R., Park, Summer, Nakamura, Gerald, Chiang, Nancy, Estevez, Alberto, Fong, Rina, Kamen, Lynn, Kho, Elviza, Reichelt, Mike, Lin, Zhonghua, Chiu, Henry, Skippington, Elizabeth, Modrusan, Zora, Stinson, Jeremy, Xu, Min, Lupardus, Patrick, Ciferri, Claudio, Tan, Man-Wah
Pubblicato in Nat Commun (2017)

Treatment of Medulloblastoma with Hedgehog Pathway Inhibitor GDC-0449

di Rudin, Charles M., Hann, Christine L., Laterra, John, Yauch, Robert L., Callahan, Christopher A., Fu, Ling, Holcomb, Thomas, Stinson, Jeremy, Gould, Stephen E., Coleman, Barbara, LoRusso, Patricia M., Von Hoff, Daniel D., de Sauvage, Frederic J., Low, Jennifer A.
Pubblicato in N Engl J Med (2009)

Corrigendum: A broadly protective therapeutic antibody against influenza B virus with two mechanisms of action

di Chai, Ning, Swem, Lee R., Park, Summer, Nakamura, Gerald, Chiang, Nancy, Estevez, Alberto, Fong, Rina, Kamen, Lynn, Kho, Elviza, Reichelt, Mike, Lin, Zhonghua, Chiu, Henry, Skippington, Elizabeth, Modrusan, Zora, Stinson, Jeremy, Xu, Min, Lupardus, Patrick, Ciferri, Claudio, Tan, Man-Wah
Pubblicato in Nat Commun (2017)

Massively parallel single-cell B-cell receptor sequencing enables rapid discovery of diverse antigen-reactive antibodies

di Goldstein, Leonard D., Chen, Ying-Jiun J., Wu, Jia, Chaudhuri, Subhra, Hsiao, Yi-Chun, Schneider, Kellen, Hoi, Kam Hon, Lin, Zhonghua, Guerrero, Steve, Jaiswal, Bijay S., Stinson, Jeremy, Antony, Aju, Pahuja, Kanika Bajaj, Seshasayee, Dhaya, Modrusan, Zora, Hötzel, Isidro, Seshagiri, Somasekar
Pubblicato in Commun Biol (2019)

Smoothened Mutation Confers Resistance to a Hedgehog Pathway Inhibitor in Medulloblastoma

di Yauch, Robert L., Dijkgraaf, Gerrit J. P., Alicke, Bruno, Januario, Thomas, Ahn, Christina P., Holcomb, Thomas, Pujara, Kanan, Stinson, Jeremy, Callahan, Christopher A., Tang, Tracy, Bazan, J. Fernando, Kan, Zhengyan, Seshagiri, Somasekar, Hann, Christine L., Gould, Stephen E., Low, Jennifer A., Rudin, Charles M., de Sauvage, Frederic J.
Pubblicato in Science (2009)

CRISPR off-target analysis in genetically engineered rats and mice

di Anderson, Keith R., Haeussler, Maximilian, Watanabe, Colin, Janakiraman, Vasantharajan, Lund, Jessica, Modrusan, Zora, Stinson, Jeremy, Bei, Qixin, Buechler, Andrew, Yu, Charles, Thamminana, Sobha R., Tam, Lucinda, Sowick, Michael-Anne, Alcantar, Tuija, O’Neil, Natasha, Li, Jinjie, Ta, Linda, Lima, Lisa, Roose-Girma, Merone, Rairdan, Xin, Durinck, Steffen, Warming, Søren
Pubblicato in Nat Methods (2018)

Massively parallel nanowell-based single-cell gene expression profiling

di Goldstein, Leonard D., Chen, Ying-Jiun Jasmine, Dunne, Jude, Mir, Alain, Hubschle, Hermann, Guillory, Joseph, Yuan, Wenlin, Zhang, Jingli, Stinson, Jeremy, Jaiswal, Bijay, Pahuja, Kanika Bajaj, Mann, Ishminder, Schaal, Thomas, Chan, Leo, Anandakrishnan, Sangeetha, Lin, Chun-wah, Espinoza, Patricio, Husain, Syed, Shapiro, Harris, Swaminathan, Karthikeyan, Wei, Sherry, Srinivasan, Maithreyan, Seshagiri, Somasekar, Modrusan, Zora
Pubblicato in BMC Genomics (2017)

Analysis of Fcγ Receptor IIIa and IIa Polymorphisms: Lack of Correlation with Outcome in Trastuzumab-Treated Breast Cancer Patients

di Hurvitz, Sara A., Betting, David J., Stern, Howard M., Quinaux, Emmanuel, Stinson, Jeremy, Seshagiri, Somasekar, Zhao, Ying, Buyse, Marc, Mackey, John, Driga, Adrian, Damaraju, Sambasivarao, Sliwkowski, Mark X., Robert, Nicholas J., Valero, Vicente, Crown, John, Falkson, Carla, Brufsky, Adam, Pienkowski, Tadeusz, Eiermann, Wolfgang, Martin, Miguel, Bee, Valerie, Marathe, Omkar, Slamon, Dennis J., Timmerman, John M.
Pubblicazione 2012

Somatic mutations in p85α promote tumorigenesis through class IA PI3K activation

di Jaiswal, Bijay S., Janakiraman, Vasantharajan, Kljavin, Noelyn M., Chaudhuri, Subhra, Stern, Howard M., Wang, Weiru, Kan, Zhengyan, Dbouk, Hashem A., Peters, Brock A., Waring, Paul, Vega, Trisha Dela, Kenski, Denise M., Bowman, Krista, Lorenzo, Maria, Li, Hong, Wu, Jiansheng, Modrusan, Zora, Stinson, Jeremy, Eby, Michael, Yue, Peng, Kaminker, Josh, de Sauvage, Frederic J., Backer, Jonathan M., Seshagiri, Somasekar
Pubblicazione 2009

The effects of hepatitis B virus integration into the genomes of hepatocellular carcinoma patients

di Jiang, Zhaoshi, Jhunjhunwala, Suchit, Liu, Jinfeng, Haverty, Peter M., Kennemer, Michael I., Guan, Yinghui, Lee, William, Carnevali, Paolo, Stinson, Jeremy, Johnson, Stephanie, Diao, Jingyu, Yeung, Stacy, Jubb, Adrian, Ye, Weilan, Wu, Thomas D., Kapadia, Sharookh B., de Sauvage, Frederic J., Gentleman, Robert C., Stern, Howard M., Seshagiri, Somasekar, Pant, Krishna P., Modrusan, Zora, Ballinger, Dennis G., Zhang, Zemin
Pubblicazione 2012

Comprehensive genomic analysis identifies pathogenic variants in maturity-onset diabetes of the young (MODY) patients in South India

di Mohan, Viswanathan, Radha, Venkatesan, Nguyen, Thong T., Stawiski, Eric W., Pahuja, Kanika Bajaj, Goldstein, Leonard D., Tom, Jennifer, Anjana, Ranjit Mohan, Kong-Beltran, Monica, Bhangale, Tushar, Jahnavi, Suresh, Chandni, Radhakrishnan, Gayathri, Vijay, George, Paul, Zhang, Na, Murugan, Sakthivel, Phalke, Sameer, Chaudhuri, Subhra, Gupta, Ravi, Zhang, Jingli, Santhosh, Sam, Stinson, Jeremy, Modrusan, Zora, Ramprasad, V. L., Seshagiri, Somasekar, Peterson, Andrew S.
Pubblicato in BMC Med Genet (2018)