Comparison of Sequencing Platforms for Single Nucleotide Variant Calls in a Human Sample

Por Ratan, Aakrosh, Miller, Webb, Guillory, Joseph, Stinson, Jeremy, Seshagiri, Somasekar, Schuster, Stephan C.
Publicado em 2013

Deep Sequencing-guided Design of a High Affinity Dual Specificity Antibody to Target Two Angiogenic Factors in Neovascular Age-related Macular Degeneration

Por Koenig, Patrick, Lee, Chingwei V., Sanowar, Sarah, Wu, Ping, Stinson, Jeremy, Harris, Seth F., Fuh, Germaine
Publicado no J Biol Chem (2015)

Mutational landscape of antibody variable domains reveals a switch modulating the interdomain conformational dynamics and antigen binding

Por Koenig, Patrick, Lee, Chingwei V., Walters, Benjamin T., Janakiraman, Vasantharajan, Stinson, Jeremy, Patapoff, Thomas W., Fuh, Germaine
Publicado no Proc Natl Acad Sci U S A (2017)

De Novo MS/MS Sequencing of Native Human Antibodies

Por Guthals, Adrian, Gan, Yutian, Murray, Laura, Chen, Yongmei, Stinson, Jeremy, Nakamura, Gerald, Lill, Jennie R, Sandoval, Wendy, Bandeira, Nuno
Publicado no J Proteome Res (2016)

Cloning and characterization of IL-17B and IL-17C, two new members of the IL-17 cytokine family

Por Li, Hanzhong, Chen, Jian, Huang, Arthur, Stinson, Jeremy, Heldens, Sherry, Foster, Jessica, Dowd, Patrick, Gurney, Austin L., Wood, William I.
Publicado em 2000

IgRepertoireConstructor: a novel algorithm for antibody repertoire construction and immunoproteogenomics analysis

Por Safonova, Yana, Bonissone, Stefano, Kurpilyansky, Eugene, Starostina, Ekaterina, Lapidus, Alla, Stinson, Jeremy, DePalatis, Laura, Sandoval, Wendy, Lill, Jennie, Pevzner, Pavel A.
Publicado no Bioinformatics (2015)

Deep RNA sequencing analysis of readthrough gene fusions in human prostate adenocarcinoma and reference samples

Por Nacu, Serban, Yuan, Wenlin, Kan, Zhengyan, Bhatt, Deepali, Rivers, Celina Sanchez, Stinson, Jeremy, Peters, Brock A, Modrusan, Zora, Jung, Kenneth, Seshagiri, Somasekar, Wu, Thomas D
Publicado em 2011

A Mouse Model of Hepatocellular Carcinoma : Ectopic Expression of Fibroblast Growth Factor 19 in Skeletal Muscle of Transgenic Mice

Por Nicholes, Katrina, Guillet, Susan, Tomlinson, Elizabeth, Hillan, Kenneth, Wright, Barbara, Frantz, Gretchen D., Pham, Thinh A., Dillard-Telm, Lisa, Tsai, Siao Ping, Stephan, Jean-Philippe, Stinson, Jeremy, Stewart, Timothy, French, Dorothy M.
Publicado em 2002

­­­Silencing of retrotransposons by SETDB1 inhibits the interferon response in acute myeloid leukemia­­

Por Cuellar, Trinna L., Herzner, Anna-Maria, Zhang, Xiaotian, Goyal, Yogesh, Watanabe, Colin, Friedman, Brad A., Janakiraman, Vasantharajan, Durinck, Steffen, Stinson, Jeremy, Arnott, David, Cheung, Tommy K., Chaudhuri, Subhra, Modrusan, Zora, Doerr, Jonas Martin, Classon, Marie, Haley, Benjamin
Publicado no J Cell Biol (2017)

A broadly protective therapeutic antibody against influenza B virus with two mechanisms of action

Por Chai, Ning, Swem, Lee R., Park, Summer, Nakamura, Gerald, Chiang, Nancy, Estevez, Alberto, Fong, Rina, Kamen, Lynn, Kho, Elviza, Reichelt, Mike, Lin, Zhonghua, Chiu, Henry, Skippington, Elizabeth, Modrusan, Zora, Stinson, Jeremy, Xu, Min, Lupardus, Patrick, Ciferri, Claudio, Tan, Man-Wah
Publicado no Nat Commun (2017)

Treatment of Medulloblastoma with Hedgehog Pathway Inhibitor GDC-0449

Por Rudin, Charles M., Hann, Christine L., Laterra, John, Yauch, Robert L., Callahan, Christopher A., Fu, Ling, Holcomb, Thomas, Stinson, Jeremy, Gould, Stephen E., Coleman, Barbara, LoRusso, Patricia M., Von Hoff, Daniel D., de Sauvage, Frederic J., Low, Jennifer A.
Publicado no N Engl J Med (2009)

Corrigendum: A broadly protective therapeutic antibody against influenza B virus with two mechanisms of action

Por Chai, Ning, Swem, Lee R., Park, Summer, Nakamura, Gerald, Chiang, Nancy, Estevez, Alberto, Fong, Rina, Kamen, Lynn, Kho, Elviza, Reichelt, Mike, Lin, Zhonghua, Chiu, Henry, Skippington, Elizabeth, Modrusan, Zora, Stinson, Jeremy, Xu, Min, Lupardus, Patrick, Ciferri, Claudio, Tan, Man-Wah
Publicado no Nat Commun (2017)

Massively parallel single-cell B-cell receptor sequencing enables rapid discovery of diverse antigen-reactive antibodies

Por Goldstein, Leonard D., Chen, Ying-Jiun J., Wu, Jia, Chaudhuri, Subhra, Hsiao, Yi-Chun, Schneider, Kellen, Hoi, Kam Hon, Lin, Zhonghua, Guerrero, Steve, Jaiswal, Bijay S., Stinson, Jeremy, Antony, Aju, Pahuja, Kanika Bajaj, Seshasayee, Dhaya, Modrusan, Zora, Hötzel, Isidro, Seshagiri, Somasekar
Publicado no Commun Biol (2019)

Smoothened Mutation Confers Resistance to a Hedgehog Pathway Inhibitor in Medulloblastoma

Por Yauch, Robert L., Dijkgraaf, Gerrit J. P., Alicke, Bruno, Januario, Thomas, Ahn, Christina P., Holcomb, Thomas, Pujara, Kanan, Stinson, Jeremy, Callahan, Christopher A., Tang, Tracy, Bazan, J. Fernando, Kan, Zhengyan, Seshagiri, Somasekar, Hann, Christine L., Gould, Stephen E., Low, Jennifer A., Rudin, Charles M., de Sauvage, Frederic J.
Publicado no Science (2009)

CRISPR off-target analysis in genetically engineered rats and mice

Por Anderson, Keith R., Haeussler, Maximilian, Watanabe, Colin, Janakiraman, Vasantharajan, Lund, Jessica, Modrusan, Zora, Stinson, Jeremy, Bei, Qixin, Buechler, Andrew, Yu, Charles, Thamminana, Sobha R., Tam, Lucinda, Sowick, Michael-Anne, Alcantar, Tuija, O’Neil, Natasha, Li, Jinjie, Ta, Linda, Lima, Lisa, Roose-Girma, Merone, Rairdan, Xin, Durinck, Steffen, Warming, Søren
Publicado no Nat Methods (2018)

Massively parallel nanowell-based single-cell gene expression profiling

Por Goldstein, Leonard D., Chen, Ying-Jiun Jasmine, Dunne, Jude, Mir, Alain, Hubschle, Hermann, Guillory, Joseph, Yuan, Wenlin, Zhang, Jingli, Stinson, Jeremy, Jaiswal, Bijay, Pahuja, Kanika Bajaj, Mann, Ishminder, Schaal, Thomas, Chan, Leo, Anandakrishnan, Sangeetha, Lin, Chun-wah, Espinoza, Patricio, Husain, Syed, Shapiro, Harris, Swaminathan, Karthikeyan, Wei, Sherry, Srinivasan, Maithreyan, Seshagiri, Somasekar, Modrusan, Zora
Publicado no BMC Genomics (2017)

Analysis of Fcγ Receptor IIIa and IIa Polymorphisms: Lack of Correlation with Outcome in Trastuzumab-Treated Breast Cancer Patients

Por Hurvitz, Sara A., Betting, David J., Stern, Howard M., Quinaux, Emmanuel, Stinson, Jeremy, Seshagiri, Somasekar, Zhao, Ying, Buyse, Marc, Mackey, John, Driga, Adrian, Damaraju, Sambasivarao, Sliwkowski, Mark X., Robert, Nicholas J., Valero, Vicente, Crown, John, Falkson, Carla, Brufsky, Adam, Pienkowski, Tadeusz, Eiermann, Wolfgang, Martin, Miguel, Bee, Valerie, Marathe, Omkar, Slamon, Dennis J., Timmerman, John M.
Publicado em 2012

Somatic mutations in p85α promote tumorigenesis through class IA PI3K activation

Por Jaiswal, Bijay S., Janakiraman, Vasantharajan, Kljavin, Noelyn M., Chaudhuri, Subhra, Stern, Howard M., Wang, Weiru, Kan, Zhengyan, Dbouk, Hashem A., Peters, Brock A., Waring, Paul, Vega, Trisha Dela, Kenski, Denise M., Bowman, Krista, Lorenzo, Maria, Li, Hong, Wu, Jiansheng, Modrusan, Zora, Stinson, Jeremy, Eby, Michael, Yue, Peng, Kaminker, Josh, de Sauvage, Frederic J., Backer, Jonathan M., Seshagiri, Somasekar
Publicado em 2009

The effects of hepatitis B virus integration into the genomes of hepatocellular carcinoma patients

Por Jiang, Zhaoshi, Jhunjhunwala, Suchit, Liu, Jinfeng, Haverty, Peter M., Kennemer, Michael I., Guan, Yinghui, Lee, William, Carnevali, Paolo, Stinson, Jeremy, Johnson, Stephanie, Diao, Jingyu, Yeung, Stacy, Jubb, Adrian, Ye, Weilan, Wu, Thomas D., Kapadia, Sharookh B., de Sauvage, Frederic J., Gentleman, Robert C., Stern, Howard M., Seshagiri, Somasekar, Pant, Krishna P., Modrusan, Zora, Ballinger, Dennis G., Zhang, Zemin
Publicado em 2012

Comprehensive genomic analysis identifies pathogenic variants in maturity-onset diabetes of the young (MODY) patients in South India

Por Mohan, Viswanathan, Radha, Venkatesan, Nguyen, Thong T., Stawiski, Eric W., Pahuja, Kanika Bajaj, Goldstein, Leonard D., Tom, Jennifer, Anjana, Ranjit Mohan, Kong-Beltran, Monica, Bhangale, Tushar, Jahnavi, Suresh, Chandni, Radhakrishnan, Gayathri, Vijay, George, Paul, Zhang, Na, Murugan, Sakthivel, Phalke, Sameer, Chaudhuri, Subhra, Gupta, Ravi, Zhang, Jingli, Santhosh, Sam, Stinson, Jeremy, Modrusan, Zora, Ramprasad, V. L., Seshagiri, Somasekar, Peterson, Andrew S.
Publicado no BMC Med Genet (2018)