CanPredict: a computational tool for predicting cancer-associated missense mutations

gan Kaminker, Joshua S., Zhang, Yan, Watanabe, Colin, Zhang, Zemin
Cyhoeddwyd 2007

MicrobiomeExplorer: an R package for the analysis and visualization of microbial communities

gan Reeder, Janina, Huang, Mo, Kaminker, Joshua S, Paulson, Joseph N
Cyhoeddwyd yn Bioinformatics (2020)

Regulation of Neuronal Gene Expression and Survival by Basal NMDA Receptor Activity: A Role for Histone Deacetylase 4

gan Chen, Yelin, Wang, Yuanyuan, Modrusan, Zora, Sheng, Morgan, Kaminker, Joshua S.
Cyhoeddwyd yn J Neurosci (2014)

High-resolution analysis of copy number alterations and associated expression changes in ovarian tumors

gan Haverty, Peter M, Hon, Lawrence S, Kaminker, Joshua S, Chant, John, Zhang, Zemin
Cyhoeddwyd 2009

ReportingTools: an automated result processing and presentation toolkit for high-throughput genomic analyses

gan Huntley, Melanie A., Larson, Jessica L., Chaivorapol, Christina, Becker, Gabriel, Lawrence, Michael, Hackney, Jason A., Kaminker, Joshua S.
Cyhoeddwyd yn Bioinformatics (2013)

Large-Scale Trends in the Evolution of Gene Structures within 11 Animal Genomes

gan Yandell, Mark, Mungall, Chris J, Smith, Chris, Prochnik, Simon, Kaminker, Joshua, Hartzell, George, Lewis, Suzanna, Rubin, Gerald M
Cyhoeddwyd 2006

Complex regulation of ADAR-mediated RNA-editing across tissues

gan Huntley, Melanie A., Lou, Melanie, Goldstein, Leonard D., Lawrence, Michael, Dijkgraaf, Gerrit J.P., Kaminker, Joshua S., Gentleman, Robert
Cyhoeddwyd yn BMC Genomics (2016)

Progranulin deficiency causes impairment of autophagy and TDP-43 accumulation

gan Chang, Michael C., Srinivasan, Karpagam, Friedman, Brad A., Suto, Eric, Modrusan, Zora, Lee, Wyne P., Kaminker, Joshua S., Hansen, David V., Sheng, Morgan
Cyhoeddwyd yn J Exp Med (2017)

Single-molecule nanopore sequencing reveals extreme target copy number heterogeneity in arylomycin-resistant mutants

gan Girgis, Hany S., DuPai, Cory D., Lund, Jessica, Reeder, Janina, Guillory, Joseph, Durinck, Steffen, Liang, Yuxin, Kaminker, Joshua, Smith, Peter A., Skippington, Elizabeth
Cyhoeddwyd yn Proc Natl Acad Sci U S A (2021)

DLK initiates a transcriptional program that couples apoptotic and regenerative responses to axonal injury

gan Watkins, Trent A., Wang, Bei, Huntwork-Rodriguez, Sarah, Yang, Jing, Jiang, Zhiyu, Eastham-Anderson, Jeffrey, Modrusan, Zora, Kaminker, Joshua S., Tessier-Lavigne, Marc, Lewcock, Joseph W.
Cyhoeddwyd 2013

Identification and functional analysis of endothelial tip cell–enriched genes

gan del Toro, Raquel, Prahst, Claudia, Mathivet, Thomas, Siegfried, Geraldine, Kaminker, Joshua S., Larrivee, Bruno, Breant, Christiane, Duarte, Antonio, Takakura, Nobuyuki, Fukamizu, Akiyoshi, Penninger, Josef, Eichmann, Anne
Cyhoeddwyd yn Blood (2010)

The transposable elements of the Drosophila melanogaster euchromatin: a genomics perspective

gan Kaminker, Joshua S, Bergman, Casey M, Kronmiller, Brent, Carlson, Joseph, Svirskas, Robert, Patel, Sandeep, Frise, Erwin, Wheeler, David A, Lewis, Suzanna E, Rubin, Gerald M, Ashburner, Michael, Celniker, Susan E
Cyhoeddwyd 2002

Spatially Coordinated Kinase Signaling Regulates Local Axon Degeneration

gan Chen, Mark, Maloney, Janice A., Kallop, Dara Y., Atwal, Jasvinder K., Tam, Stephen J., Baer, Kristin, Kissel, Holger, Kaminker, Joshua S., Lewcock, Joseph W., Weimer, Robby M., Watts, Ryan J.
Cyhoeddwyd yn J Neurosci (2012)

Dual leucine zipper kinase-dependent PERK activation contributes to neuronal degeneration following insult

gan Larhammar, Martin, Huntwork-Rodriguez, Sarah, Jiang, Zhiyu, Solanoy, Hilda, Sengupta Ghosh, Arundhati, Wang, Bei, Kaminker, Joshua S, Huang, Kevin, Eastham-Anderson, Jeffrey, Siu, Michael, Modrusan, Zora, Farley, Madeline M, Tessier-Lavigne, Marc, Lewcock, Joseph W, Watkins, Trent A
Cyhoeddwyd yn eLife (2017)

Untangling the brain's neuroinflammatory and neurodegenerative transcriptional responses

gan Srinivasan, Karpagam, Friedman, Brad A., Larson, Jessica L., Lauffer, Benjamin E., Goldstein, Leonard D., Appling, Laurie L., Borneo, Jovencio, Poon, Chungkee, Ho, Terence, Cai, Fang, Steiner, Pascal, van der Brug, Marcel P., Modrusan, Zora, Kaminker, Joshua S., Hansen, David V.
Cyhoeddwyd yn Nat Commun (2016)

Heterochromatic sequences in a Drosophila whole-genome shotgun assembly

gan Hoskins, Roger A, Smith, Christopher D, Carlson, Joseph W, Carvalho, A Bernardo, Halpern, Aaron, Kaminker, Joshua S, Kennedy, Cameron, Mungall, Chris J, Sullivan, Beth A, Sutton, Granger G, Yasuhara, Jiro C, Wakimoto, Barbara T, Myers, Eugene W, Celniker, Susan E, Rubin, Gerald M, Karpen, Gary H
Cyhoeddwyd 2002

Histone Deacetylase (HDAC) Inhibitor Kinetic Rate Constants Correlate with Cellular Histone Acetylation but Not Transcription and Cell Viability

gan Lauffer, Benjamin E. L., Mintzer, Robert, Fong, Rina, Mukund, Susmith, Tam, Christine, Zilberleyb, Inna, Flicke, Birgit, Ritscher, Allegra, Fedorowicz, Grazyna, Vallero, Roxanne, Ortwine, Daniel F., Gunzner, Janet, Modrusan, Zora, Neumann, Lars, Koth, Christopher M., Lupardus, Patrick J., Kaminker, Joshua S., Heise, Christopher E., Steiner, Pascal
Cyhoeddwyd 2013

Granulocyte-colony stimulating factor promotes lung metastasis through mobilization of Ly6G+Ly6C+ granulocytes

gan Kowanetz, Marcin, Wu, Xiumin, Lee, John, Tan, Martha, Hagenbeek, Thijs, Qu, Xueping, Yu, Lanlan, Ross, Jed, Korsisaari, Nina, Cao, Tim, Bou-Reslan, Hani, Kallop, Dara, Weimer, Robby, Ludlam, Mary J. C., Kaminker, Joshua S., Modrusan, Zora, van Bruggen, Nicholas, Peale, Franklin V., Carano, Richard, Meng, Y. Gloria, Ferrara, Napoleone
Cyhoeddwyd 2010

A common variant of IL-6R is associated with elevated IL-6 pathway activity in Alzheimer’s disease brains

gan Haddick, Patrick C.G., Larson, Jessica L., Rathore, Nisha, Bhangale, Tushar R., Phung, Qui T., Srinivasan, Karpagam, Hansen, David V., Lill, Jennie R., Pericak-Vance, Margaret A., Haines, Jonathan, Farrer, Lindsay A., Kauwe, John S., Schellenberg, Gerard D., Cruchaga, Carlos, Goate, Alison M., Behrens, Timothy W., Watts, Ryan J., Graham, Robert R., Kaminker, Joshua S., van der Brug, Marcel
Cyhoeddwyd yn J Alzheimers Dis (2017)

Annotation of the Drosophila melanogaster euchromatic genome: a systematic review

gan Misra, Sima, Crosby, Madeline A, Mungall, Christopher J, Matthews, Beverley B, Campbell, Kathryn S, Hradecky, Pavel, Huang, Yanmei, Kaminker, Joshua S, Millburn, Gillian H, Prochnik, Simon E, Smith, Christopher D, Tupy, Jonathan L, Whitfield, Eleanor J, Bayraktaroglu, Leyla, Berman, Benjamin P, Bettencourt, Brian R, Celniker, Susan E, de Grey, Aubrey DNJ, Drysdale, Rachel A, Harris, Nomi L, Richter, John, Russo, Susan, Schroeder, Andrew J, Shu, ShengQiang, Stapleton, Mark, Yamada, Chihiro, Ashburner, Michael, Gelbart, William M, Rubin, Gerald M, Lewis, Suzanna E
Cyhoeddwyd 2002