MAKER2: an annotation pipeline and genome-database management tool for second-generation genome projects

od Holt Carson, Yandell Mark
Izdano 2011-12-01

MAKER2: an annotation pipeline and genome-database management tool for second-generation genome projects

od Holt, Carson, Yandell, Mark
Izdano 2011

Settling the score: variant prioritization and Mendelian disease

od Eilbeck, Karen, Quinlan, Aaron, Yandell, Mark
izdano v Nat Rev Genet (2017)

Quantitative measures for the management and comparison of annotated genomes

od Eilbeck, Karen, Moore, Barry, Holt, Carson, Yandell, Mark
Izdano 2009

Genome Annotation and Curation Using MAKER and MAKER-P

od Campbell, Michael S., Holt, Carson, Moore, Barry, Yandell, Mark
izdano v Curr Protoc Bioinformatics (2014)

Elucidation of the molecular envenomation strategy of the cone snail <it>Conus geographus</it> through transcriptome sequencing of its venom duct

od Hu Hao, Bandyopadhyay Pradip K, Olivera Baldomero M, Yandell Mark
Izdano 2012-06-01

Characterization of the Conus bullatus genome and its venom-duct transcriptome

od Hu, Hao, Bandyopadhyay, Pradip K, Olivera, Baldomero M, Yandell, Mark
Izdano 2011

Elucidation of the molecular envenomation strategy of the cone snail Conus geographus through transcriptome sequencing of its venom duct

od Hu, Hao, Bandyopadhyay, Pradip K, Olivera, Baldomero M, Yandell, Mark
Izdano 2012

Antimicrobial Functions of Lactoferrin Promote Genetic Conflicts in Ancient Primates and Modern Humans

od Barber, Matthew F., Kronenberg, Zev, Yandell, Mark, Elde, Nels C.
izdano v PLoS Genet (2016)

ImagePlane: An Automated Image Analysis Pipeline for High-Throughput Screens Using the Planarian Schmidtea mediterranea

od Flygare, Steven, Campbell, Michael, Ross, Robert Mars, Moore, Barry, Yandell, Mark
Izdano 2013

VARPRISM: incorporating variant prioritization in tests of de novo mutation association

od Hu, Hao, Coon, Hilary, Li, Man, Yandell, Mark, Huff, Chad D.
izdano v Genome Med (2016)

Emergence of a Viral RNA Polymerase Variant during Gene Copy Number Amplification Promotes Rapid Evolution of Vaccinia Virus

od Cone, Kelsey R., Kronenberg, Zev N., Yandell, Mark, Elde, Nels C.
izdano v J Virol (2017)

The draft genome sequence and annotation of the desert woodrat Neotoma lepida

od Campbell, Michael, Oakeson, Kelly F., Yandell, Mark, Halpert, James R., Dearing, Denise
izdano v Genom Data (2016)

Discovery of Novel Conotoxin Candidates Using Machine Learning

od Li, Qing, Watkins, Maren, Robinson, Samuel D., Safavi-Hemami, Helena, Yandell, Mark
izdano v Toxins (Basel) (2018)

VAAST 2.0: Improved Variant Classification and Disease-Gene Identification Using a Conservation-Controlled Amino Acid Substitution Matrix

od Hu, Hao, Huff, Chad D, Moore, Barry, Flygare, Steven, Reese, Martin G, Yandell, Mark
Izdano 2013

In Vivo Determination of Direct Targets of the Nonsense-Mediated Decay Pathway in Drosophila

od Chapin, Alex, Hu, Hao, Rynearson, Shawn G., Hollien, Julie, Yandell, Mark, Metzstein, Mark M.
Izdano 2014

Predicting gene structure changes resulting from genetic variants via exon definition features

od Majoros, William H, Holt, Carson, Campbell, Michael S, Ware, Doreen, Yandell, Mark, Reddy, Timothy E
izdano v Bioinformatics (2018)

The Sequence Ontology: a tool for the unification of genome annotations

od Eilbeck, Karen, Lewis, Suzanna E, Mungall, Christopher J, Yandell, Mark, Stein, Lincoln, Durbin, Richard, Ashburner, Michael
Izdano 2005

Genome-Wide Analysis of Human Disease Alleles Reveals That Their Locations Are Correlated in Paralogous Proteins

od Yandell, Mark, Moore, Barry, Salas, Fidel, Mungall, Chris, MacBride, Andrew, White, Charles, Reese, Martin G.
Izdano 2008

Global analysis of disease-related DNA sequence variation in 10 healthy individuals: Implications for whole genome-based clinical diagnostics

od Moore, Barry, Hu, Hao, Singleton, Marc, De La Vega, Francisco M., Reese, Martin G., Yandell, Mark
Izdano 2011