MAKER2: an annotation pipeline and genome-database management tool for second-generation genome projects

Por Holt Carson, Yandell Mark
Publicado em 2011-12-01

MAKER2: an annotation pipeline and genome-database management tool for second-generation genome projects

Por Holt, Carson, Yandell, Mark
Publicado em 2011

Quantitative measures for the management and comparison of annotated genomes

Por Eilbeck, Karen, Moore, Barry, Holt, Carson, Yandell, Mark
Publicado em 2009

Genome Annotation and Curation Using MAKER and MAKER-P

Por Campbell, Michael S., Holt, Carson, Moore, Barry, Yandell, Mark
Publicado no Curr Protoc Bioinformatics (2014)

Elucidation of the molecular envenomation strategy of the cone snail <it>Conus geographus</it> through transcriptome sequencing of its venom duct

Por Hu Hao, Bandyopadhyay Pradip K, Olivera Baldomero M, Yandell Mark
Publicado em 2012-06-01

Characterization of the Conus bullatus genome and its venom-duct transcriptome

Por Hu, Hao, Bandyopadhyay, Pradip K, Olivera, Baldomero M, Yandell, Mark
Publicado em 2011

Elucidation of the molecular envenomation strategy of the cone snail Conus geographus through transcriptome sequencing of its venom duct

Por Hu, Hao, Bandyopadhyay, Pradip K, Olivera, Baldomero M, Yandell, Mark
Publicado em 2012

Antimicrobial Functions of Lactoferrin Promote Genetic Conflicts in Ancient Primates and Modern Humans

Por Barber, Matthew F., Kronenberg, Zev, Yandell, Mark, Elde, Nels C.
Publicado no PLoS Genet (2016)

ImagePlane: An Automated Image Analysis Pipeline for High-Throughput Screens Using the Planarian Schmidtea mediterranea

Por Flygare, Steven, Campbell, Michael, Ross, Robert Mars, Moore, Barry, Yandell, Mark
Publicado em 2013

VARPRISM: incorporating variant prioritization in tests of de novo mutation association

Por Hu, Hao, Coon, Hilary, Li, Man, Yandell, Mark, Huff, Chad D.
Publicado no Genome Med (2016)

Emergence of a Viral RNA Polymerase Variant during Gene Copy Number Amplification Promotes Rapid Evolution of Vaccinia Virus

Por Cone, Kelsey R., Kronenberg, Zev N., Yandell, Mark, Elde, Nels C.
Publicado no J Virol (2017)

The draft genome sequence and annotation of the desert woodrat Neotoma lepida

Por Campbell, Michael, Oakeson, Kelly F., Yandell, Mark, Halpert, James R., Dearing, Denise
Publicado no Genom Data (2016)

VAAST 2.0: Improved Variant Classification and Disease-Gene Identification Using a Conservation-Controlled Amino Acid Substitution Matrix

Por Hu, Hao, Huff, Chad D, Moore, Barry, Flygare, Steven, Reese, Martin G, Yandell, Mark
Publicado em 2013

In Vivo Determination of Direct Targets of the Nonsense-Mediated Decay Pathway in Drosophila

Por Chapin, Alex, Hu, Hao, Rynearson, Shawn G., Hollien, Julie, Yandell, Mark, Metzstein, Mark M.
Publicado em 2014

The Sequence Ontology: a tool for the unification of genome annotations

Por Eilbeck, Karen, Lewis, Suzanna E, Mungall, Christopher J, Yandell, Mark, Stein, Lincoln, Durbin, Richard, Ashburner, Michael
Publicado em 2005

Genome-Wide Analysis of Human Disease Alleles Reveals That Their Locations Are Correlated in Paralogous Proteins

Por Yandell, Mark, Moore, Barry, Salas, Fidel, Mungall, Chris, MacBride, Andrew, White, Charles, Reese, Martin G.
Publicado em 2008

Global analysis of disease-related DNA sequence variation in 10 healthy individuals: Implications for whole genome-based clinical diagnostics

Por Moore, Barry, Hu, Hao, Singleton, Marc, De La Vega, Francisco M., Reese, Martin G., Yandell, Mark
Publicado em 2011

Transiently Active Wnt/β-Catenin Signaling Is Not Required but Must Be Silenced for Stem Cell Function during Muscle Regeneration

Por Murphy, Malea M., Keefe, Alexandra C., Lawson, Jennifer A., Flygare, Steven D., Yandell, Mark, Kardon, Gabrielle
Publicado no Stem Cell Reports (2014)

Large-Scale Trends in the Evolution of Gene Structures within 11 Animal Genomes

Por Yandell, Mark, Mungall, Chris J, Smith, Chris, Prochnik, Simon, Kaminker, Joshua, Hartzell, George, Lewis, Suzanna, Rubin, Gerald M
Publicado em 2006

A probabilistic disease-gene finder for personal genomes

Por Yandell, Mark, Huff, Chad, Hu, Hao, Singleton, Marc, Moore, Barry, Xing, Jinchuan, Jorde, Lynn B., Reese, Martin G.
Publicado em 2011