DETECTING STATISTICAL INTERACTION BETWEEN SOMATIC MUTATIONAL EVENTS AND GERMLINE VARIATION FROM NEXT-GENERATION SEQUENCE DATA

Por HU, HAO, HUFF, CHAD D.
Publicado em 2014

Detecting positive selection from genome scans of linkage disequilibrium

Por Huff, Chad D, Harpending, Henry C, Rogers, Alan R
Publicado em 2010

Early history of Neanderthals and Denisovans

Por Rogers, Alan R., Bohlender, Ryan J., Huff, Chad D.
Publicado no Proc Natl Acad Sci U S A (2017)

Reply to Mafessoni and Prüfer: Inferences with and without singleton site patterns

Por Rogers, Alan R., Bohlender, Ryan J., Huff, Chad D.
Publicado no Proc Natl Acad Sci U S A (2017)

The Relationship between Native American Ancestry, Body Mass Index and Diabetes Risk among Mexican-Americans

Por Hu, Hao, Huff, Chad D., Yamamura, Yuko, Wu, Xifeng, Strom, Sara S.
Publicado no PLoS One (2015)

VARPRISM: incorporating variant prioritization in tests of de novo mutation association

Por Hu, Hao, Coon, Hilary, Li, Man, Yandell, Mark, Huff, Chad D.
Publicado no Genome Med (2016)

Mobile elements reveal small population size in the ancient ancestors of Homo sapiens

Por Huff, Chad D., Xing, Jinchuan, Rogers, Alan R., Witherspoon, David, Jorde, Lynn B.
Publicado em 2010

VAAST 2.0: Improved Variant Classification and Disease-Gene Identification Using a Conservation-Controlled Amino Acid Substitution Matrix

Por Hu, Hao, Huff, Chad D, Moore, Barry, Flygare, Steven, Reese, Martin G, Yandell, Mark
Publicado em 2013

PADRE: Pedigree-Aware Distant-Relationship Estimation

Por Staples, Jeffrey, Witherspoon, David J., Jorde, Lynn B., Nickerson, Deborah A., Below, Jennifer E., Huff, Chad D.
Publicado no Am J Hum Genet (2016)

Integrated case-control and somatic-germline interaction analyses of melanoma susceptibility genes

Por Yu, Yao, Hu, Hao, Chen, Jiun-Sheng, Hu, Fulan, Fowler, Jerry, Scheet, Paul, Zhao, Hua, Huff, Chad D.
Publicado no Biochim Biophys Acta Mol Basis Dis (2018)

Shared and Unique Signals of High-Altitude Adaptation in Geographically Distinct Tibetan Populations

Por Wuren, Tana, Simonson, Tatum S., Qin, Ga, Xing, Jinchuan, Huff, Chad D., Witherspoon, David J., Jorde, Lynn B., Ge, Ri-Li
Publicado em 2014

Limited Distribution of a Cardiomyopathy-Associated Variant in India

Por Simonson, Tatum S., Zhang, Yuhua, Huff, Chad D., Xing, Jinchuan, Watkins, W. Scott, Witherspoon, David J., Woodward, Scott R., Jorde, Lynn B.
Publicado em 2010

Genomic Analysis of Natural Selection and Phenotypic Variation in High-Altitude Mongolians

Por Xing, Jinchuan, Wuren, Tana, Simonson, Tatum S., Watkins, W. Scott, Witherspoon, David J., Wu, Wilfred, Qin, Ga, Huff, Chad D., Jorde, Lynn B., Ge, Ri-Li
Publicado em 2013

Genetic diversity in India and the inference of Eurasian population expansion

Por Xing, Jinchuan, Watkins, W Scott, Hu, Ya, Huff, Chad D, Sabo, Aniko, Muzny, Donna M, Bamshad, Michael J, Gibbs, Richard A, Jorde, Lynn B, Yu, Fuli
Publicado em 2010

Mobile elements create structural variation: Analysis of a complete human genome

Por Xing, Jinchuan, Zhang, Yuhua, Han, Kyudong, Salem, Abdel Halim, Sen, Shurjo K., Huff, Chad D., Zhou, Qiong, Kirkness, Ewen F., Levy, Samuel, Batzer, Mark A., Jorde, Lynn B.
Publicado em 2009

Ancestry of the Iban Is Predominantly Southeast Asian: Genetic Evidence from Autosomal, Mitochondrial, and Y Chromosomes

Por Simonson, Tatum S., Xing, Jinchuan, Barrett, Robert, Jerah, Edward, Loa, Peter, Zhang, Yuhua, Watkins, W. Scott, Witherspoon, David J., Huff, Chad D., Woodward, Scott, Mowry, Bryan, Jorde, Lynn B.
Publicado em 2011

XPAT: a toolkit to conduct cross-platform association studies with heterogeneous sequencing datasets

Por Yu, Yao, Hu, Hao, Bohlender, Ryan J, Hu, Fulan, Chen, Jiun-Sheng, Holt, Carson, Fowler, Jerry, Guthery, Stephen L, Scheet, Paul, Hildebrandt, Michelle A T, Yandell, Mark, Huff, Chad D
Publicado no Nucleic Acids Res (2018)

Relationship Estimation from Whole-Genome Sequence Data

Por Li, Hong, Glusman, Gustavo, Hu, Hao, Shankaracharya, Caballero, Juan, Hubley, Robert, Witherspoon, David, Guthery, Stephen L., Mauldin, Denise E., Jorde, Lynn B., Hood, Leroy, Roach, Jared C., Huff, Chad D.
Publicado em 2014

Introgression of regulatory alleles and a missense coding mutation drive plumage pattern diversity in the rock pigeon

Por Vickrey, Anna I, Bruders, Rebecca, Kronenberg, Zev, Mackey, Emma, Bohlender, Ryan J, Maclary, Emily T, Maynez, Raquel, Osborne, Edward J, Johnson, Kevin P, Huff, Chad D, Yandell, Mark, Shapiro, Michael D
Publicado no eLife (2018)

Metabolic insight into mechanisms of high-altitude adaptation in Tibetans

Por Ge, Ri-Li, Simonson, Tatum S., Cooksey, Robert C., Tanna, Uran, Qin, Ga, Huff, Chad D., Witherspoon, David J., Xing, Jinchuan, Zhengzhong, Bai, Prchal, Josef T., Jorde, Lynn B., McClain, Donald A.
Publicado em 2012