Identification and distribution of the NBS-LRR gene family in the Cassava genome

Por Lozano, Roberto, Hamblin, Martha T, Prochnik, Simon, Jannink, Jean-Luc
Publicado no BMC Genomics (2015)

The GreenCut2 Resource, a Phylogenomically Derived Inventory of Proteins Specific to the Plant Lineage

Por Karpowicz, Steven J., Prochnik, Simon E., Grossman, Arthur R., Merchant, Sabeeha S.
Publicado em 2011

Novel sfi1 Alleles Uncover Additional Functions for Sfi1p in Bipolar Spindle Assembly and Function

Por Anderson, Victoria E., Prudden, John, Prochnik, Simon, Giddings, Thomas H., Hardwick, Kevin G.
Publicado em 2007

Large-Scale Trends in the Evolution of Gene Structures within 11 Animal Genomes

Por Yandell, Mark, Mungall, Chris J, Smith, Chris, Prochnik, Simon, Kaminker, Joshua, Hartzell, George, Lewis, Suzanna, Rubin, Gerald M
Publicado em 2006

The Cassava Genome: Current Progress, Future Directions

Por Prochnik, Simon, Marri, Pradeep Reddy, Desany, Brian, Rabinowicz, Pablo D., Kodira, Chinnappa, Mohiuddin, Mohammed, Rodriguez, Fausto, Fauquet, Claude, Tohme, Joseph, Harkins, Timothy, Rokhsar, Daniel S., Rounsley, Steve
Publicado em 2012

Genome Analysis of Planctomycetes Inhabiting Blades of the Red Alga Porphyra umbilicalis

Por Kim, Jay W., Brawley, Susan H., Prochnik, Simon, Chovatia, Mansi, Grimwood, Jane, Jenkins, Jerry, LaButti, Kurt, Mavromatis, Konstantinos, Nolan, Matt, Zane, Matthew, Schmutz, Jeremy, Stiller, John W., Grossman, Arthur R.
Publicado no PLoS One (2016)

The Reference Genome of the Halophytic Plant Eutrema salsugineum

Por Yang, Ruolin, Jarvis, David E., Chen, Hao, Beilstein, Mark A., Grimwood, Jane, Jenkins, Jerry, Shu, ShengQiang, Prochnik, Simon, Xin, Mingming, Ma, Chuang, Schmutz, Jeremy, Wing, Rod A., Mitchell-Olds, Thomas, Schumaker, Karen S., Wang, Xiangfeng
Publicado em 2013

Evolution of an Expanded Sex Determining Locus in Volvox

Por Ferris, Patrick, Olson, Bradley J.S.C., De Hoff, Peter L., Douglass, Stephen, Diaz-Cano, David Casero, Prochnik, Simon, Geng, Sa, Rai, Rhitu, Grimwood, Jane, Schmutz, Jeremy, Nishii, Ichiro, Hamaji, Takashi, Nozaki, Hisayoshi, Pellegrini, Matteo, Umen, James G.
Publicado em 2010

Analysis of Porphyra Membrane Transporters Demonstrates Gene Transfer among Photosynthetic Eukaryotes and Numerous Sodium-Coupled Transport Systems(1)([C])([W])([OA])

Por Chan, Cheong Xin, Zäuner, Simone, Wheeler, Glen, Grossman, Arthur R., Prochnik, Simon E., Blouin, Nicolas A., Zhuang, Yunyun, Benning, Christoph, Berg, Gry Mine, Yarish, Charles, Eriksen, Renée L., Klein, Anita S., Lin, Senjie, Levine, Ira, Brawley, Susan H., Bhattacharya, Debashish
Publicado em 2012

The Chlamydomonas genome project: a decade on

Por Blaby, Ian K., Blaby-Haas, Crysten, Tourasse, Nicolas, Hom, Erik F. Y., Lopez, David, Aksoy, Munevver, Grossman, Arthur, Umen, James, Dutcher, Susan, Porter, Mary, King, Stephen, Witman, George, Stanke, Mario, Harris, Elizabeth H., Goodstein, David, Grimwood, Jane, Schmutz, Jeremy, Vallon, Olivier, Merchant, Sabeeha S., Prochnik, Simon
Publicado em 2014

Genomic Analysis of Organismal Complexity in the Multicellular Green Alga Volvox carteri

Por Prochnik, Simon E., Umen, James, Nedelcu, Aurora M., Hallmann, Armin, Miller, Stephen M., Nishii, Ichiro, Ferris, Patrick, Kuo, Alan, Mitros, Therese, Fritz-Laylin, Lillian K., Hellsten, Uffe, Chapman, Jarrod, Simakov, Oleg, Rensing, Stefan A., Terry, Astrid, Pangilinan, Jasmyn, Kapitonov, Vladimir, Jurka, Jerzy, Salamov, Asaf, Shapiro, Harris, Schmutz, Jeremy, Grimwood, Jane, Lindquist, Erika, Lucas, Susan, Grigoriev, Igor V., Schmitt, Rüdiger, Kirk, David, Rokhsar, Daniel S.
Publicado em 2010

Annotation of the Drosophila melanogaster euchromatic genome: a systematic review

Por Misra, Sima, Crosby, Madeline A, Mungall, Christopher J, Matthews, Beverley B, Campbell, Kathryn S, Hradecky, Pavel, Huang, Yanmei, Kaminker, Joshua S, Millburn, Gillian H, Prochnik, Simon E, Smith, Christopher D, Tupy, Jonathan L, Whitfield, Eleanor J, Bayraktaroglu, Leyla, Berman, Benjamin P, Bettencourt, Brian R, Celniker, Susan E, de Grey, Aubrey DNJ, Drysdale, Rachel A, Harris, Nomi L, Richter, John, Russo, Susan, Schroeder, Andrew J, Shu, ShengQiang, Stapleton, Mark, Yamada, Chihiro, Ashburner, Michael, Gelbart, William M, Rubin, Gerald M, Lewis, Suzanna E
Publicado em 2002

Sequencing of diverse mandarin, pummelo and orange genomes reveals complex history of admixture during citrus domestication

Por Wu, G. Albert, Prochnik, Simon, Jenkins, Jerry, Salse, Jerome, Hellsten, Uffe, Murat, Florent, Perrier, Xavier, Ruiz, Manuel, Scalabrin, Simone, Terol, Javier, Takita, Marco Aurélio, Labadie, Karine, Poulain, Julie, Couloux, Arnaud, Jabbari, Kamel, Cattonaro, Federica, Del Fabbro, Cristian, Pinosio, Sara, Zuccolo, Andrea, Chapman, Jarrod, Grimwood, Jane, Tadeo, Francisco R., Estornell, Leandro H., Muñoz-Sanz, Juan V., Ibanez, Victoria, Herrero-Ortega, Amparo, Aleza, Pablo, Pérez-Pérez, Julián, Ramón, Daniel, Brunel, Dominique, Luro, François, Chen, Chunxian, Farmerie, William G., Desany, Brian, Kodira, Chinnappa, Mohiuddin, Mohammed, Harkins, Tim, Fredrikson, Karin, Burns, Paul, Lomsadze, Alexandre, Borodovsky, Mark, Reforgiato, Giuseppe, Freitas-Astúa, Juliana, Quetier, Francis, Navarro, Luis, Roose, Mikeal, Wincker, Patrick, Schmutz, Jeremy, Morgante, Michele, Machado, Marcos Antonio, Talon, Manuel, Jaillon, Olivier, Ollitrault, Patrick, Gmitter, Frederick, Rokhsar, Daniel
Publicado em 2014

The dynamic genome of Hydra

Por Chapman, Jarrod A., Kirkness, Ewen F., Simakov, Oleg, Hampson, Steven E., Mitros, Therese, Weinmaier, Therese, Rattei, Thomas, Balasubramanian, Prakash G., Borman, Jon, Busam, Dana, Disbennett, Kathryn, Pfannkoch, Cynthia, Sumin, Nadezhda, Sutton, Granger G., Viswanathan, Lakshmi Devi, Walenz, Brian, Goodstein, David M., Hellsten, Uffe, Kawashima, Takeshi, Prochnik, Simon E., Putnam, Nicholas H., Shu, Shengquiang, Blumberg, Bruce, Dana, Catherine E., Gee, Lydia, Kibler, Dennis F., Law, Lee, Lindgens, Dirk, Martinez, Daniel E., Peng, Jisong, Wigge, Philip A., Bertulat, Bianca, Guder, Corina, Nakamura, Yukio, Ozbek, Suat, Watanabe, Hiroshi, Khalturin, Konstantin, Hemmrich, Georg, Franke, André, Augustin, René, Fraune, Sebastian, Hayakawa, Eisuke, Hayakawa, Shiho, Hirose, Mamiko, Hwang, Jung Shan, Ikeo, Kazuho, Nishimiya-Fujisawa, Chiemi, Ogura, Atshushi, Takahashi, Toshio, Steinmetz, Patrick R. H., Zhang, Xiaoming, Aufschnaiter, Roland, Eder, Marie-Kristin, Gorny, Anne-Kathrin, Salvenmoser, Willi, Heimberg, Alysha M., Wheeler, Benjamin M., Peterson, Kevin J., Böttger, Angelika, Tischler, Patrick, Wolf, Alexander, Gojobori, Takashi, Remington, Karin A., Strausberg, Robert L., Venter, J. Craig, Technau, Ulrich, Hobmayer, Bert, Bosch, Thomas C. G., Holstein, Thomas W., Fujisawa, Toshitaka, Bode, Hans R., David, Charles N., Rokhsar, Daniel S., Steele, Robert E.
Publicado no Nature (2010)

The Chlamydomonas Genome Reveals the Evolution of Key Animal and Plant Functions

Por Merchant, Sabeeha S., Prochnik, Simon E., Vallon, Olivier, Harris, Elizabeth H., Karpowicz, Steven J., Witman, George B., Terry, Astrid, Salamov, Asaf, Fritz-Laylin, Lillian K., Maréchal-Drouard, Laurence, Marshall, Wallace F., Qu, Liang-Hu, Nelson, David R., Sanderfoot, Anton A., Spalding, Martin H., Kapitonov, Vladimir V., Ren, Qinghu, Ferris, Patrick, Lindquist, Erika, Shapiro, Harris, Lucas, Susan M., Grimwood, Jane, Schmutz, Jeremy, Cardol, Pierre, Cerutti, Heriberto, Chanfreau, Guillaume, Chen, Chun-Long, Cognat, Valérie, Croft, Martin T., Dent, Rachel, Dutcher, Susan, Fernández, Emilio, Ferris, Patrick, Fukuzawa, Hideya, González-Ballester, David, González-Halphen, Diego, Hallmann, Armin, Hanikenne, Marc, Hippler, Michael, Inwood, William, Jabbari, Kamel, Kalanon, Ming, Kuras, Richard, Lefebvre, Paul A., Lemaire, Stéphane D., Lobanov, Alexey V., Lohr, Martin, Manuell, Andrea, Meier, Iris, Mets, Laurens, Mittag, Maria, Mittelmeier, Telsa, Moroney, James V., Moseley, Jeffrey, Napoli, Carolyn, Nedelcu, Aurora M., Niyogi, Krishna, Novoselov, Sergey V., Paulsen, Ian T., Pazour, Greg, Purton, Saul, Ral, Jean-Philippe, Riaño-Pachón, Diego Mauricio, Riekhof, Wayne, Rymarquis, Linda, Schroda, Michael, Stern, David, Umen, James, Willows, Robert, Wilson, Nedra, Zimmer, Sara Lana, Allmer, Jens, Balk, Janneke, Bisova, Katerina, Chen, Chong-Jian, Elias, Marek, Gendler, Karla, Hauser, Charles, Lamb, Mary Rose, Ledford, Heidi, Long, Joanne C., Minagawa, Jun, Page, M. Dudley, Pan, Junmin, Pootakham, Wirulda, Roje, Sanja, Rose, Annkatrin, Stahlberg, Eric, Terauchi, Aimee M., Yang, Pinfen, Ball, Steven, Bowler, Chris, Dieckmann, Carol L., Gladyshev, Vadim N., Green, Pamela, Jorgensen, Richard, Mayfield, Stephen, Mueller-Roeber, Bernd, Rajamani, Sathish, Sayre, Richard T., Brokstein, Peter, Dubchak, Inna, Goodstein, David, Hornick, Leila, Huang, Y. Wayne, Jhaveri, Jinal, Luo, Yigong, Martínez, Diego, Ngau, Wing Chi Abby, Otillar, Bobby, Poliakov, Alexander, Porter, Aaron, Szajkowski, Lukasz, Werner, Gregory, Zhou, Kemin, Grigoriev, Igor V., Rokhsar, Daniel S., Grossman, Arthur R.
Publicado em 2007