Whole-Genome Analysis of the Methyl tert-Butyl Ether-Degrading Beta-Proteobacterium Methylibium petroleiphilum PM1

door Kane, Staci R., Chakicherla, Anu Y., Chain, Patrick S. G., Schmidt, Radomir, Shin, Maria W., Legler, Tina C., Scow, Kate M., Larimer, Frank W., Lucas, Susan M., Richardson, Paul M., Hristova, Krassimira R.
Gepubliceerd in 2007

Whole-Genome Analysis of the Methyl tert-Butyl Ether-Degrading Beta-Proteobacterium Methylibium petroleiphilum PM1

door Kane, Staci R., Chakicherla, Anu Y., Chain, Patrick S. G., Schmidt, Radomir, Shin, Maria W., Legler, Tina C., Scow, Kate M., Larimer, Frank W., Lucas, Susan M., Richardson, Paul M., Hristova, Krassimira R.
Gepubliceerd in 2007

Complete genome sequence of Nitrosomonas sp. Is79, an ammonia oxidizing bacterium adapted to low ammonium concentrations

door Bollmann, Annette, Sedlacek, Christopher J., Norton, Jeanette, Laanbroek, Hendrikus J., Suwa, Yuichi, Stein, Lisa Y., Klotz, Martin G., Arp, Daniel, Sayavedra-Soto, Luis, Lu, Megan, Bruce, David, Detter, Chris, Tapia, Roxanne, Han, James, Woyke, Tanja, Lucas, Susan M., Pitluck, Sam, Pennacchio, Len, Nolan, Matt, Land, Miriam L., Huntemann, Marcel, Deshpande, Shweta, Han, Cliff, Chen, Amy, Kyrpides, Nikos, Mavromatis, Konstantinos, Markowitz, Victor, Szeto, Ernest, Ivanova, Natalia, Mikhailova, Natalia, Pagani, Ioanna, Pati, Amrita, Peters, Lin, Ovchinnikova, Galina, Goodwin, Lynne A.
Gepubliceerd in 2013

Genome sequence of the button mushroom Agaricus bisporus reveals mechanisms governing adaptation to a humic-rich ecological niche

door Morin, Emmanuelle, Kohler, Annegret, Baker, Adam R., Foulongne-Oriol, Marie, Lombard, Vincent, Nagye, Laszlo G., Ohm, Robin A., Patyshakuliyeva, Aleksandrina, Brun, Annick, Aerts, Andrea L., Bailey, Andrew M., Billette, Christophe, Coutinho, Pedro M., Deakin, Greg, Doddapaneni, Harshavardhan, Floudas, Dimitrios, Grimwood, Jane, Hildén, Kristiina, Kües, Ursula, LaButti, Kurt M., Lapidus, Alla, Lindquist, Erika A., Lucas, Susan M., Murat, Claude, Riley, Robert W., Salamov, Asaf A., Schmutz, Jeremy, Subramanian, Venkataramanan, Wösten, Han A. B., Xu, Jianping, Eastwood, Daniel C., Foster, Gary D., Sonnenberg, Anton S. M., Cullen, Dan, de Vries, Ronald P., Lundell, Taina, Hibbett, David S., Henrissat, Bernard, Burton, Kerry S., Kerrigan, Richard W., Challen, Michael P., Grigoriev, Igor V., Martin, Francis
Gepubliceerd in 2012

The Genome of the Western Clawed Frog Xenopus tropicalis

door Hellsten, Uffe, Harland, Richard M., Gilchrist, Michael J., Hendrix, David, Jurka, Jerzy, Kapitonov, Vladimir, Ovcharenko, Ivan, Putnam, Nicholas H., Shu, Shengqiang, Taher, Leila, Blitz, Ira L., Blumberg, Bruce, Dichmann, Darwin S., Dubchak, Inna, Amaya, Enrique, Detter, John C., Fletcher, Russell, Gerhard, Daniela S., Goodstein, David, Graves, Tina, Grigoriev, Igor V., Grimwood, Jane, Kawashima, Takeshi, Lindquist, Erika, Lucas, Susan M., Mead, Paul E., Mitros, Therese, Ogino, Hajime, Ohta, Yuko, Poliakov, Alexander V., Pollet, Nicolas, Robert, Jacques, Salamov, Asaf, Sater, Amy K., Schmutz, Jeremy, Terry, Astrid, Vize, Peter D., Warren, Wesley C., Wells, Dan, Wills, Andrea, Wilson, Richard K., Zimmerman, Lyle B., Zorn, Aaron M., Grainger, Robert, Grammer, Timothy, Khokha, Mustafa K., Richardson, Paul M., Rokhsar, Daniel S.
Gepubliceerd in 2010

Obligate biotrophy features unraveled by the genomic analysis of rust fungi

door Duplessis, Sébastien, Cuomo, Christina A., Lin, Yao-Cheng, Aerts, Andrea, Tisserant, Emilie, Veneault-Fourrey, Claire, Joly, David L., Hacquard, Stéphane, Amselem, Joëlle, Cantarel, Brandi L., Chiu, Readman, Coutinho, Pedro M., Feau, Nicolas, Field, Matthew, Frey, Pascal, Gelhaye, Eric, Goldberg, Jonathan, Grabherr, Manfred G., Kodira, Chinnappa D., Kohler, Annegret, Kües, Ursula, Lindquist, Erika A., Lucas, Susan M., Mago, Rohit, Mauceli, Evan, Morin, Emmanuelle, Murat, Claude, Pangilinan, Jasmyn L., Park, Robert, Pearson, Matthew, Quesneville, Hadi, Rouhier, Nicolas, Sakthikumar, Sharadha, Salamov, Asaf A., Schmutz, Jeremy, Selles, Benjamin, Shapiro, Harris, Tanguay, Philippe, Tuskan, Gerald A., Henrissat, Bernard, Van de Peer, Yves, Rouzé, Pierre, Ellis, Jeffrey G., Dodds, Peter N., Schein, Jacqueline E., Zhong, Shaobin, Hamelin, Richard C., Grigoriev, Igor V., Szabo, Les J., Martin, Francis
Gepubliceerd in 2011

Comparative genomics of Ceriporiopsis subvermispora and Phanerochaete chrysosporium provide insight into selective ligninolysis

door Fernandez-Fueyo, Elena, Ruiz-Dueñas, Francisco J., Ferreira, Patricia, Floudas, Dimitrios, Hibbett, David S., Canessa, Paulo, Larrondo, Luis F., James, Tim Y., Seelenfreund, Daniela, Lobos, Sergio, Polanco, Rubén, Tello, Mario, Honda, Yoichi, Watanabe, Takahito, Watanabe, Takashi, Ryu, Jae San, Kubicek, Christian P., Schmoll, Monika, Gaskell, Jill, Hammel, Kenneth E., St. John, Franz J., Vanden Wymelenberg, Amber, Sabat, Grzegorz, Splinter BonDurant, Sandra, Syed, Khajamohiddin, Yadav, Jagjit S., Doddapaneni, Harshavardhan, Subramanian, Venkataramanan, Lavín, José L., Oguiza, José A., Perez, Gumer, Pisabarro, Antonio G., Ramirez, Lucia, Santoyo, Francisco, Master, Emma, Coutinho, Pedro M., Henrissat, Bernard, Lombard, Vincent, Magnuson, Jon Karl, Kües, Ursula, Hori, Chiaki, Igarashi, Kiyohiko, Samejima, Masahiro, Held, Benjamin W., Barry, Kerrie W., LaButti, Kurt M., Lapidus, Alla, Lindquist, Erika A., Lucas, Susan M., Riley, Robert, Salamov, Asaf A., Hoffmeister, Dirk, Schwenk, Daniel, Hadar, Yitzhak, Yarden, Oded, de Vries, Ronald P., Wiebenga, Ad, Stenlid, Jan, Eastwood, Daniel, Grigoriev, Igor V., Berka, Randy M., Blanchette, Robert A., Kersten, Phil, Martinez, Angel T., Vicuna, Rafael, Cullen, Dan
Gepubliceerd in 2012

The Ecoresponsive Genome of Daphnia pulex

door Colbourne, John K., Pfrender, Michael E., Gilbert, Donald, Thomas, W. Kelley, Tucker, Abraham, Oakley, Todd H., Tokishita, Shinichi, Aerts, Andrea, Arnold, Georg J., Basu, Malay Kumar, Bauer, Darren J., Cáceres, Carla E., Carmel, Liran, Casola, Claudio, Choi, Jeong-Hyeon, Detter, John C., Dong, Qunfeng, Dusheyko, Serge, Eads, Brian D., Fröhlich, Thomas, Geiler-Samerotte, Kerry A., Gerlach, Daniel, Hatcher, Phil, Jogdeo, Sanjuro, Krijgsveld, Jeroen, Kriventseva, Evgenia V, Kültz, Dietmar, Laforsch, Christian, Lindquist, Erika, Lopez, Jacqueline, Manak, J. Robert, Muller, Jean, Pangilinan, Jasmyn, Patwardhan, Rupali P., Pitluck, Samuel, Pritham, Ellen J., Rechtsteiner, Andreas, Rho, Mina, Rogozin, Igor B., Sakarya, Onur, Salamov, Asaf, Schaack, Sarah, Shapiro, Harris, Shiga, Yasuhiro, Skalitzky, Courtney, Smith, Zachary, Souvorov, Alexander, Sung, Way, Tang, Zuojian, Tsuchiya, Dai, Tu, Hank, Vos, Harmjan, Wang, Mei, Wolf, Yuri I., Yamagata, Hideo, Yamada, Takuji, Ye, Yuzhen, Shaw, Joseph R., Andrews, Justen, Crease, Teresa J., Tang, Haixu, Lucas, Susan M., Robertson, Hugh M., Bork, Peer, Koonin, Eugene V., Zdobnov, Evgeny M., Grigoriev, Igor V., Lynch, Michael, Boore, Jeffrey L.
Gepubliceerd in 2011

The Chlamydomonas Genome Reveals the Evolution of Key Animal and Plant Functions

door Merchant, Sabeeha S., Prochnik, Simon E., Vallon, Olivier, Harris, Elizabeth H., Karpowicz, Steven J., Witman, George B., Terry, Astrid, Salamov, Asaf, Fritz-Laylin, Lillian K., Maréchal-Drouard, Laurence, Marshall, Wallace F., Qu, Liang-Hu, Nelson, David R., Sanderfoot, Anton A., Spalding, Martin H., Kapitonov, Vladimir V., Ren, Qinghu, Ferris, Patrick, Lindquist, Erika, Shapiro, Harris, Lucas, Susan M., Grimwood, Jane, Schmutz, Jeremy, Cardol, Pierre, Cerutti, Heriberto, Chanfreau, Guillaume, Chen, Chun-Long, Cognat, Valérie, Croft, Martin T., Dent, Rachel, Dutcher, Susan, Fernández, Emilio, Ferris, Patrick, Fukuzawa, Hideya, González-Ballester, David, González-Halphen, Diego, Hallmann, Armin, Hanikenne, Marc, Hippler, Michael, Inwood, William, Jabbari, Kamel, Kalanon, Ming, Kuras, Richard, Lefebvre, Paul A., Lemaire, Stéphane D., Lobanov, Alexey V., Lohr, Martin, Manuell, Andrea, Meier, Iris, Mets, Laurens, Mittag, Maria, Mittelmeier, Telsa, Moroney, James V., Moseley, Jeffrey, Napoli, Carolyn, Nedelcu, Aurora M., Niyogi, Krishna, Novoselov, Sergey V., Paulsen, Ian T., Pazour, Greg, Purton, Saul, Ral, Jean-Philippe, Riaño-Pachón, Diego Mauricio, Riekhof, Wayne, Rymarquis, Linda, Schroda, Michael, Stern, David, Umen, James, Willows, Robert, Wilson, Nedra, Zimmer, Sara Lana, Allmer, Jens, Balk, Janneke, Bisova, Katerina, Chen, Chong-Jian, Elias, Marek, Gendler, Karla, Hauser, Charles, Lamb, Mary Rose, Ledford, Heidi, Long, Joanne C., Minagawa, Jun, Page, M. Dudley, Pan, Junmin, Pootakham, Wirulda, Roje, Sanja, Rose, Annkatrin, Stahlberg, Eric, Terauchi, Aimee M., Yang, Pinfen, Ball, Steven, Bowler, Chris, Dieckmann, Carol L., Gladyshev, Vadim N., Green, Pamela, Jorgensen, Richard, Mayfield, Stephen, Mueller-Roeber, Bernd, Rajamani, Sathish, Sayre, Richard T., Brokstein, Peter, Dubchak, Inna, Goodstein, David, Hornick, Leila, Huang, Y. Wayne, Jhaveri, Jinal, Luo, Yigong, Martínez, Diego, Ngau, Wing Chi Abby, Otillar, Bobby, Poliakov, Alexander, Porter, Aaron, Szajkowski, Lukasz, Werner, Gregory, Zhou, Kemin, Grigoriev, Igor V., Rokhsar, Daniel S., Grossman, Arthur R.
Gepubliceerd in 2007