Internet Contig Explorer (iCE)—A Tool for Visualizing Clone Fingerprint Maps

Por Fjell, Christopher D., Bosdet, Ian, Schein, Jacqueline E., Jones, Steven J.M., Marra, Marco A.
Publicado em 2003

ABySS: A parallel assembler for short read sequence data

Por Simpson, Jared T., Wong, Kim, Jackman, Shaun D., Schein, Jacqueline E., Jones, Steven J.M., Birol, İnanç
Publicado em 2009

Novel expressed sequences identified in a model of androgen independent prostate cancer

Por Quayle, Steven N, Hare, Heidi, Delaney, Allen D, Hirst, Martin, Hwang, Dorothy, Schein, Jacqueline E, Jones, Steven JM, Marra, Marco A, Sadar, Marianne D
Publicado em 2007

Putative BRAF activating fusion in a medullary thyroid cancer

Por Kasaian, Katayoon, Wiseman, Sam M., Walker, Blair A., Schein, Jacqueline E., Hirst, Martin, Moore, Richard A., Mungall, Andrew J., Marra, Marco A., Jones, Steven J.M.
Publicado no Cold Spring Harb Mol Case Stud (2016)

The genomic and transcriptomic landscape of anaplastic thyroid cancer: implications for therapy

Por Kasaian, Katayoon, Wiseman, Sam M., Walker, Blair A., Schein, Jacqueline E., Zhao, Yongjun, Hirst, Martin, Moore, Richard A., Mungall, Andrew J., Marra, Marco A., Jones, Steven JM
Publicado no BMC Cancer (2015)

A high-resolution whole-genome cattle–human comparative map reveals details of mammalian chromosome evolution

Por Wind, Annelie Everts-van der, Larkin, Denis M., Green, Cheryl A., Elliott, Janice S., Olmstead, Colleen A., Chiu, Readman, Schein, Jacqueline E., Marra, Marco A., Womack, James E., Lewin, Harris A.
Publicado em 2005

Physical Maps for Genome Analysis of Serotype A and D Strains of the Fungal Pathogen Cryptococcus neoformans

Por Schein, Jacqueline E., Tangen, Kristin L., Chiu, Readman, Shin, Heesun, Lengeler, Klaus B., MacDonald, William Kim, Bosdet, Ian, Heitman, Joseph, Jones, Steven J.M., Marra, Marco A., Kronstad, James W.
Publicado em 2002

A BAC-based physical map of the Drosophila buzzatii genome

Por González, Josefa, Nefedov, Michael, Bosdet, Ian, Casals, Ferran, Calvete, Oriol, Delprat, Alejandra, Shin, Heesun, Chiu, Readman, Mathewson, Carrie, Wye, Natasja, Hoskins, Roger A., Schein, Jacqueline E., de Jong, Pieter, Ruiz, Alfredo
Publicado em 2005

Software for Automated Analysis of DNA Fingerprinting Gels

Por Fuhrmann, Daniel R., Krzywinski, Martin I., Chiu, Readman, Saeedi, Parvaneh, Schein, Jacqueline E., Bosdet, Ian E., Chinwalla, Asif, Hillier, LaDeana W., Waterston, Robert H., McPherson, John D., Jones, Steven J.M., Marra, Marco A.
Publicado em 2003

Molecular etiology of an indolent lymphoproliferative disorder determined by whole-genome sequencing

Por Parker, Jeremy D.K., Shen, Yaoqing, Pleasance, Erin, Li, Yvonne, Schein, Jacqueline E., Zhao, Yongjun, Moore, Richard, Wegrzyn-Woltosz, Joanna, Savage, Kerry J., Weng, Andrew P., Gascoyne, Randy D., Jones, Steven, Marra, Marco, Laskin, Janessa, Karsan, Aly
Publicado no Cold Spring Harb Mol Case Stud (2016)

Physical map-assisted whole-genome shotgun sequence assemblies

Por Warren, René L., Varabei, Dmitry, Platt, Darren, Huang, Xiaoqiu, Messina, David, Yang, Shiaw-Pyng, Kronstad, James W., Krzywinski, Martin, Warren, Wesley C., Wallis, John W., Hillier, LaDeana W., Chinwalla, Asif T., Schein, Jacqueline E., Siddiqui, Asim S., Marra, Marco A., Wilson, Richard K., Jones, Steven J.M.
Publicado em 2006

MEN1 Mutations in Hürthle Cell (Oncocytic) Thyroid Carcinoma

Por Kasaian, Katayoon, Chindris, Ana-Maria, Wiseman, Sam M., Mungall, Karen L., Zeng, Thomas, Tse, Kane, Schein, Jacqueline E., Rivera, Michael, Necela, Brian M., Kachergus, Jennifer M., Casler, John D., Mungall, Andrew J., Moore, Richard A., Marra, Marco A., Copland, John A., Thompson, E. Aubrey, Smallridge, Robert C., Jones, Steven J. M.
Publicado no J Clin Endocrinol Metab (2015)

Diagnostic Value of Next-Generation Sequencing in an Unusual Sphenoid Tumor

Por Jamshidi, Farzad, Pleasance, Erin, Li, Yvonne, Shen, Yaoqing, Kasaian, Katayoon, Corbett, Richard, Eirew, Peter, Lum, Amy, Pandoh, Pawan, Zhao, Yongjun, Schein, Jacqueline E., Moore, Richard A., Rassekh, Rod, Huntsman, David G., Knowling, Meg, Lim, Howard, Renouf, Daniel J., Jones, Steven J.M., Marra, Marco A., Nielsen, Torsten O., Laskin, Janessa, Yip, Stephen
Publicado em 2014

An efficient strategy for large-scale high-throughput transposon-mediated sequencing of cDNA clones

Por Butterfield, Yaron S. N., Marra, Marco A., Asano, Jennifer K., Chan, Susanna Y., Guin, Ranabir, Krzywinski, Martin I., Lee, Soo Sen, MacDonald, Kim W. K., Mathewson, Carrie A., Olson, Teika E., Pandoh, Pawan K., Prabhu, Anna-Liisa, Schnerch, Angelique, Skalska, Ursula, Smailus, Duane E., Stott, Jeff M., Tsai, Miranda I., Yang, George S., Zuyderduyn, Scott D., Schein, Jacqueline E., Jones, Steven J. M.
Publicado em 2002

Development and Application of a Salmonid EST Database and cDNA Microarray: Data Mining and Interspecific Hybridization Characteristics

Por Rise, Matthew L., von Schalburg, Kristian R., Brown, Gordon D., Mawer, Melanie A., Devlin, Robert H., Kuipers, Nathanael, Busby, Maura, Beetz-Sargent, Marianne, Alberto, Roberto, Gibbs, A. Ross, Hunt, Peter, Shukin, Robert, Zeznik, Jeffrey A., Nelson, Colleen, Jones, Simon R.M., Smailus, Duane E., Jones, Steven J.M., Schein, Jacqueline E., Marra, Marco A., Butterfield, Yaron S.N., Stott, Jeff M., Ng, Siemon H.S., Davidson, William S., Koop, Ben F.
Publicado em 2004

The complete genome of Rhodococcus sp. RHA1 provides insights into a catabolic powerhouse

Por McLeod, Michael P., Warren, René L., Hsiao, William W. L., Araki, Naoto, Myhre, Matthew, Fernandes, Clinton, Miyazawa, Daisuke, Wong, Wendy, Lillquist, Anita L., Wang, Dennis, Dosanjh, Manisha, Hara, Hirofumi, Petrescu, Anca, Morin, Ryan D., Yang, George, Stott, Jeff M., Schein, Jacqueline E., Shin, Heesun, Smailus, Duane, Siddiqui, Asim S., Marra, Marco A., Jones, Steven J. M., Holt, Robert, Brinkman, Fiona S. L., Miyauchi, Keisuke, Fukuda, Masao, Davies, Julian E., Mohn, William W., Eltis, Lindsay D.
Publicado em 2006

The Genome Sequence of Caenorhabditis briggsae: A Platform for Comparative Genomics

Por Stein, Lincoln D, Bao, Zhirong, Blasiar, Darin, Blumenthal, Thomas, Brent, Michael R, Chen, Nansheng, Chinwalla, Asif, Clarke, Laura, Clee, Chris, Coghlan, Avril, Coulson, Alan, D'Eustachio, Peter, Fitch, David H. A, Fulton, Lucinda A, Fulton, Robert E, Griffiths-Jones, Sam, Harris, Todd W, Hillier, LaDeana W, Kamath, Ravi, Kuwabara, Patricia E, Mardis, Elaine R, Marra, Marco A, Miner, Tracie L, Minx, Patrick, Mullikin, James C, Plumb, Robert W, Rogers, Jane, Schein, Jacqueline E, Sohrmann, Marc, Spieth, John, Stajich, Jason E, Wei, Chaochun, Willey, David, Wilson, Richard K, Durbin, Richard, Waterston, Robert H
Publicado em 2003

Oligonucleotide Microarray Analysis of Genomic Imbalance in Children with Mental Retardation

Por Friedman, J. M., Baross, Ágnes, Delaney, Allen D., Ally, Adrian, Arbour, Laura, Asano, Jennifer, Bailey, Dione K., Barber, Sarah, Birch, Patricia, Brown-John, Mabel, Cao, Manqiu, Chan, Susanna, Charest, David L., Farnoud, Noushin, Fernandes, Nicole, Flibotte, Stephane, Go, Anne, Gibson, William T., Holt, Robert A., Jones, Steven J. M., Kennedy, Giulia C., Krzywinski, Martin, Langlois, Sylvie, Li, Haiyan I., McGillivray, Barbara C., Nayar, Tarun, Pugh, Trevor J., Rajcan-Separovic, Evica, Schein, Jacqueline E., Schnerch, Angelique, Siddiqui, Asim, Van Allen, Margot I., Wilson, Gary, Yong, Siu-Li, Zahir, Farah, Eydoux, Patrice, Marra, Marco A.
Publicado em 2006

Obligate biotrophy features unraveled by the genomic analysis of rust fungi

Por Duplessis, Sébastien, Cuomo, Christina A., Lin, Yao-Cheng, Aerts, Andrea, Tisserant, Emilie, Veneault-Fourrey, Claire, Joly, David L., Hacquard, Stéphane, Amselem, Joëlle, Cantarel, Brandi L., Chiu, Readman, Coutinho, Pedro M., Feau, Nicolas, Field, Matthew, Frey, Pascal, Gelhaye, Eric, Goldberg, Jonathan, Grabherr, Manfred G., Kodira, Chinnappa D., Kohler, Annegret, Kües, Ursula, Lindquist, Erika A., Lucas, Susan M., Mago, Rohit, Mauceli, Evan, Morin, Emmanuelle, Murat, Claude, Pangilinan, Jasmyn L., Park, Robert, Pearson, Matthew, Quesneville, Hadi, Rouhier, Nicolas, Sakthikumar, Sharadha, Salamov, Asaf A., Schmutz, Jeremy, Selles, Benjamin, Shapiro, Harris, Tanguay, Philippe, Tuskan, Gerald A., Henrissat, Bernard, Van de Peer, Yves, Rouzé, Pierre, Ellis, Jeffrey G., Dodds, Peter N., Schein, Jacqueline E., Zhong, Shaobin, Hamelin, Richard C., Grigoriev, Igor V., Szabo, Les J., Martin, Francis
Publicado em 2011

Analysis of the Genome and Transcriptome of Cryptococcus neoformans var. grubii Reveals Complex RNA Expression and Microevolution Leading to Virulence Attenuation

Por Janbon, Guilhem, Ormerod, Kate L., Paulet, Damien, Byrnes, Edmond J., Yadav, Vikas, Chatterjee, Gautam, Mullapudi, Nandita, Hon, Chung-Chau, Billmyre, R. Blake, Brunel, François, Bahn, Yong-Sun, Chen, Weidong, Chen, Yuan, Chow, Eve W. L., Coppée, Jean-Yves, Floyd-Averette, Anna, Gaillardin, Claude, Gerik, Kimberly J., Goldberg, Jonathan, Gonzalez-Hilarion, Sara, Gujja, Sharvari, Hamlin, Joyce L., Hsueh, Yen-Ping, Ianiri, Giuseppe, Jones, Steven, Kodira, Chinnappa D., Kozubowski, Lukasz, Lam, Woei, Marra, Marco, Mesner, Larry D., Mieczkowski, Piotr A., Moyrand, Frédérique, Nielsen, Kirsten, Proux, Caroline, Rossignol, Tristan, Schein, Jacqueline E., Sun, Sheng, Wollschlaeger, Carolin, Wood, Ian A., Zeng, Qiandong, Neuvéglise, Cécile, Newlon, Carol S., Perfect, John R., Lodge, Jennifer K., Idnurm, Alexander, Stajich, Jason E., Kronstad, James W., Sanyal, Kaustuv, Heitman, Joseph, Fraser, James A., Cuomo, Christina A., Dietrich, Fred S.
Publicado em 2014