Physical map-assisted whole-genome shotgun sequence assemblies

We describe a targeted approach to improve the contiguity of whole-genome shotgun sequence (WGS) assemblies at run-time, using information from Bacterial Artificial Chromosome (BAC)-based physical maps. Clone sizes and overlaps derived from clone fingerprints are used for the calculation of length c...

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Detalhes bibliográficos
Main Authors: Warren, René L., Varabei, Dmitry, Platt, Darren, Huang, Xiaoqiu, Messina, David, Yang, Shiaw-Pyng, Kronstad, James W., Krzywinski, Martin, Warren, Wesley C., Wallis, John W., Hillier, LaDeana W., Chinwalla, Asif T., Schein, Jacqueline E., Siddiqui, Asim S., Marra, Marco A., Wilson, Richard K., Jones, Steven J.M.
Formato: Artigo
Idioma:Inglês
Publicado em: Cold Spring Harbor Laboratory Press 2006
Assuntos:
Methods
Acesso em linha:https://ncbi.nlm.nih.gov/pmc/articles/PMC1473187/
https://ncbi.nlm.nih.gov/pubmed/16741162
https://ncbi.nlm.nih.govhttp://dx.doi.org/10.1101/gr.5090606
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