Physical map-assisted whole-genome shotgun sequence assemblies

We describe a targeted approach to improve the contiguity of whole-genome shotgun sequence (WGS) assemblies at run-time, using information from Bacterial Artificial Chromosome (BAC)-based physical maps. Clone sizes and overlaps derived from clone fingerprints are used for the calculation of length c...

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Bibliografiske detaljer
Main Authors: Warren, René L., Varabei, Dmitry, Platt, Darren, Huang, Xiaoqiu, Messina, David, Yang, Shiaw-Pyng, Kronstad, James W., Krzywinski, Martin, Warren, Wesley C., Wallis, John W., Hillier, LaDeana W., Chinwalla, Asif T., Schein, Jacqueline E., Siddiqui, Asim S., Marra, Marco A., Wilson, Richard K., Jones, Steven J.M.
Format: Artigo
Sprog:Inglês
Udgivet: Cold Spring Harbor Laboratory Press 2006
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Methods
Online adgang:https://ncbi.nlm.nih.gov/pmc/articles/PMC1473187/
https://ncbi.nlm.nih.gov/pubmed/16741162
https://ncbi.nlm.nih.govhttp://dx.doi.org/10.1101/gr.5090606
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