Physical map-assisted whole-genome shotgun sequence assemblies

We describe a targeted approach to improve the contiguity of whole-genome shotgun sequence (WGS) assemblies at run-time, using information from Bacterial Artificial Chromosome (BAC)-based physical maps. Clone sizes and overlaps derived from clone fingerprints are used for the calculation of length c...

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Détails bibliographiques
Auteurs principaux: Warren, René L., Varabei, Dmitry, Platt, Darren, Huang, Xiaoqiu, Messina, David, Yang, Shiaw-Pyng, Kronstad, James W., Krzywinski, Martin, Warren, Wesley C., Wallis, John W., Hillier, LaDeana W., Chinwalla, Asif T., Schein, Jacqueline E., Siddiqui, Asim S., Marra, Marco A., Wilson, Richard K., Jones, Steven J.M.
Format: Artigo
Langue:Inglês
Publié: Cold Spring Harbor Laboratory Press 2006
Sujets:
Methods
Accès en ligne:https://ncbi.nlm.nih.gov/pmc/articles/PMC1473187/
https://ncbi.nlm.nih.gov/pubmed/16741162
https://ncbi.nlm.nih.govhttp://dx.doi.org/10.1101/gr.5090606
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