Machine learning: A primer

door Bzdok, Danilo, Krzywinski, Martin, Altman, Naomi
Gepubliceerd in Nat Methods (2017)

Machine learning: supervised methods

door Bzdok, Danilo, Krzywinski, Martin, Altman, Naomi
Gepubliceerd in Nat Methods (2018)

Statistics versus machine learning

door Bzdok, Danilo, Altman, Naomi, Krzywinski, Martin
Gepubliceerd in Nat Methods (2018)

Sampling distributions and the bootstrap: The bootstrap can be used to assess uncertainty of sample estimates

door Kulesa, Anthony, Krzywinski, Martin, Blainey, Paul, Altman, Naomi
Gepubliceerd in Nat Methods (2015)

Fast Diploidization in Close Mesopolyploid Relatives of Arabidopsis([W])([OA])

door Mandáková, Terezie, Joly, Simon, Krzywinski, Martin, Mummenhoff, Klaus, Lysak, Martin A.
Gepubliceerd in 2010

Hive Panel Explorer: an interactive network visualization tool

door Perez, Sarah E I, Hahn, Aria S, Krzywinski, Martin, Hallam, Steven J
Gepubliceerd in Bioinformatics (2020)

Circos: An information aesthetic for comparative genomics

door Krzywinski, Martin, Schein, Jacqueline, Birol, İnanç, Connors, Joseph, Gascoyne, Randy, Horsman, Doug, Jones, Steven J., Marra, Marco A.
Gepubliceerd in 2009

Understanding the sequence requirements of protein families: insights from the BioVis 2013 contests

door Ray, William C, Rumpf, R Wolfgang, Sullivan, Brandon, Callahan, Nicholas, Magliery, Thomas, Machiraju, Raghu, Wong, Bang, Krzywinski, Martin, Bartlett, Christopher W
Gepubliceerd in 2014

An Epigenomic Approach to Improving Response to Neoadjuvant Cisplatin Chemotherapy in Bladder Cancer

door Xylinas, Evanguelos, Hassler, Melanie R., Zhuang, Dazhong, Krzywinski, Martin, Erdem, Zeynep, Robinson, Brian D., Elemento, Olivier, Clozel, Thomas, Shariat, Shahrokh F.
Gepubliceerd in Biomolecules (2016)

Impact of ERBB2 mutations on in vitro sensitivity of bladder cancer to lapatinib

door de Martino, Michela, Zhuang, Dazhong, Klatte, Tobias, Rieken, Malte, Rouprêt, Morgan, Xylinas, Evanguelos, Clozel, Thomas, Krzywinski, Martin, Elemento, Olivier, Shariat, Shahrokh F
Gepubliceerd in 2014

The anatomy of successful computational biology software

door Altschul, Stephen, Demchak, Barry, Durbin, Richard, Gentleman, Robert, Krzywinski, Martin, Li, Heng, Nekrutenko, Anton, Robinson, James, Rasband, Wayne, Taylor, James, Trapnell, Cole
Gepubliceerd in 2013

Fusobacterium nucleatum infection is prevalent in human colorectal carcinoma

door Castellarin, Mauro, Warren, René L., Freeman, J. Douglas, Dreolini, Lisa, Krzywinski, Martin, Strauss, Jaclyn, Barnes, Rebecca, Watson, Peter, Allen-Vercoe, Emma, Moore, Richard A., Holt, Robert A.
Gepubliceerd in 2012

Enhancing knowledge discovery from cancer genomics data with Galaxy

door Albuquerque, Marco A., Grande, Bruno M., Ritch, Elie J., Pararajalingam, Prasath, Jessa, Selin, Krzywinski, Martin, Grewal, Jasleen K., Shah, Sohrab P., Boutros, Paul C., Morin, Ryan D.
Gepubliceerd in Gigascience (2017)

A BAC clone fingerprinting approach to the detection of human genome rearrangements

door Krzywinski, Martin, Bosdet, Ian, Mathewson, Carrie, Wye, Natasja, Brebner, Jay, Chiu, Readman, Corbett, Richard, Field, Matthew, Lee, Darlene, Pugh, Trevor, Volik, Stas, Siddiqui, Asim, Jones, Steven, Schein, Jacquie, Collins, Collin, Marra, Marco
Gepubliceerd in 2007

Software for Automated Analysis of DNA Fingerprinting Gels

door Fuhrmann, Daniel R., Krzywinski, Martin I., Chiu, Readman, Saeedi, Parvaneh, Schein, Jacqueline E., Bosdet, Ian E., Chinwalla, Asif, Hillier, LaDeana W., Waterston, Robert H., McPherson, John D., Jones, Steven J.M., Marra, Marco A.
Gepubliceerd in 2003

Genome-wide relationship between histone H3 lysine 4 mono- and tri-methylation and transcription factor binding

door Robertson, A. Gordon, Bilenky, Mikhail, Tam, Angela, Zhao, Yongjun, Zeng, Thomas, Thiessen, Nina, Cezard, Timothee, Fejes, Anthony P., Wederell, Elizabeth D., Cullum, Rebecca, Euskirchen, Ghia, Krzywinski, Martin, Birol, Inanc, Snyder, Michael, Hoodless, Pamela A., Hirst, Martin, Marra, Marco A., Jones, Steven J.M.
Gepubliceerd in 2008

Physical map-assisted whole-genome shotgun sequence assemblies

door Warren, René L., Varabei, Dmitry, Platt, Darren, Huang, Xiaoqiu, Messina, David, Yang, Shiaw-Pyng, Kronstad, James W., Krzywinski, Martin, Warren, Wesley C., Wallis, John W., Hillier, LaDeana W., Chinwalla, Asif T., Schein, Jacqueline E., Siddiqui, Asim S., Marra, Marco A., Wilson, Richard K., Jones, Steven J.M.
Gepubliceerd in 2006

Comprehensive miRNA sequence analysis reveals survival differences in diffuse large B-cell lymphoma patients

door Lim, Emilia L, Trinh, Diane L, Scott, David W, Chu, Andy, Krzywinski, Martin, Zhao, Yongjun, Robertson, A Gordon, Mungall, Andrew J, Schein, Jacqueline, Boyle, Merrill, Mottok, Anja, Ennishi, Daisuke, Johnson, Nathalie A, Steidl, Christian, Connors, Joseph M, Morin, Ryan D, Gascoyne, Randy D, Marra, Marco A
Gepubliceerd in Genome Biol (2015)

An efficient strategy for large-scale high-throughput transposon-mediated sequencing of cDNA clones

door Butterfield, Yaron S. N., Marra, Marco A., Asano, Jennifer K., Chan, Susanna Y., Guin, Ranabir, Krzywinski, Martin I., Lee, Soo Sen, MacDonald, Kim W. K., Mathewson, Carrie A., Olson, Teika E., Pandoh, Pawan K., Prabhu, Anna-Liisa, Schnerch, Angelique, Skalska, Ursula, Smailus, Duane E., Stott, Jeff M., Tsai, Miranda I., Yang, George S., Zuyderduyn, Scott D., Schein, Jacqueline E., Jones, Steven J. M.
Gepubliceerd in 2002

A set of BAC clones spanning the human genome

door Krzywinski, Martin, Bosdet, Ian, Smailus, Duane, Chiu, Readman, Mathewson, Carrie, Wye, Natasja, Barber, Sarah, Brown-John, Mabel, Chan, Susanna, Chand, Steve, Cloutier, Alison, Girn, Noreen, Lee, Darlene, Masson, Amara, Mayo, Michael, Olson, Teika, Pandoh, Pawan, Prabhu, Anna-Liisa, Schoenmakers, Eric, Tsai, Miranda, Albertson, Donna, Lam, Wan, Choy, Chik-On, Osoegawa, Kazutoyo, Zhao, Shaying, de Jong, Pieter J., Schein, Jacqueline, Jones, Steven, Marra, Marco A.
Gepubliceerd in 2004