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Application of a superword array in genome assembly
We introduce a data structure called a superword array for finding quickly matches between DNA sequences. The superword array possesses some desirable features of the lookup table and suffix array. We describe simple algorithms for constructing and using a superword array to find pairs of sequences...
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| Hlavní autoři: | , , , , , , |
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| Médium: | Artigo |
| Jazyk: | Inglês |
| Vydáno: |
Oxford University Press
2006
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| Témata: | |
| On-line přístup: | https://ncbi.nlm.nih.gov/pmc/articles/PMC1325203/ https://ncbi.nlm.nih.gov/pubmed/16397298 https://ncbi.nlm.nih.govhttp://dx.doi.org/10.1093/nar/gkj419 |
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