Nematode genome evolution.

Por Coghlan, Avril
Publicado no WormBook (2005)

Genomix: a method for combining gene-finders’ predictions, which uses evolutionary conservation of sequence and intron–exon structure

Por Coghlan, Avril, Durbin, Richard
Publicado em 2007

Origins of recently gained introns in Caenorhabditis

Por Coghlan, Avril, Wolfe, Kenneth H.
Publicado em 2004

Fourfold Faster Rate of Genome Rearrangement in Nematodes Than in Drosophila

Por Coghlan, Avril, Wolfe, Kenneth H.
Publicado em 2002

nGASP – the nematode genome annotation assessment project

Por Coghlan, Avril, Fiedler, Tristan J, McKay, Sheldon J, Flicek, Paul, Harris, Todd W, Blasiar, Darin, Stein, Lincoln D
Publicado em 2008

Duplication and Retention Biases of Essential and Non-Essential Genes Revealed by Systematic Knockdown Analyses

Por Woods, Shane, Coghlan, Avril, Rivers, David, Warnecke, Tobias, Jeffries, Sean J., Kwon, Taejoon, Rogers, Anthony, Hurst, Laurence D., Ahringer, Julie
Publicado em 2013

Characterization of Pro-Inflammatory Flagellin Proteins Produced by Lactobacillus ruminis and Related Motile Lactobacilli

Por Neville, B. Anne, Forde, Brian M., Claesson, Marcus J., Darby, Trevor, Coghlan, Avril, Nally, Kenneth, Ross, R. Paul, O’Toole, Paul W.
Publicado em 2012

Genome sequences and comparative genomics of two Lactobacillus ruminis strains from the bovine and human intestinal tracts

Por Forde, Brian M, Neville, B Anne, O’ Donnell, Michelle M, Riboulet-Bisson, E, Claesson, M J, Coghlan, Avril, Ross, R Paul, O’ Toole, Paul W
Publicado em 2011

TreeFam: a curated database of phylogenetic trees of animal gene families

Por Li, Heng, Coghlan, Avril, Ruan, Jue, Coin, Lachlan James, Hériché, Jean-Karim, Osmotherly, Lara, Li, Ruiqiang, Liu, Tao, Zhang, Zhang, Bolund, Lars, Wong, Gane Ka-Shu, Zheng, Weimou, Dehal, Paramvir, Wang, Jun, Durbin, Richard
Publicado em 2006

TreeFam: 2008 Update

Por Ruan, Jue, Li, Heng, Chen, Zhongzhong, Coghlan, Avril, Coin, Lachlan James M., Guo, Yiran, Hériché, Jean-Karim, Hu, Yafeng, Kristiansen, Karsten, Li, Ruiqiang, Liu, Tao, Moses, Alan, Qin, Junjie, Vang, Søren, Vilella, Albert J., Ureta-Vidal, Abel, Bolund, Lars, Wang, Jun, Durbin, Richard
Publicado em 2008

The genome of the sparganosis tapeworm Spirometra erinaceieuropaei isolated from the biopsy of a migrating brain lesion

Por Bennett, Hayley M, Mok, Hoi Ping, Gkrania-Klotsas, Effrossyni, Tsai, Isheng J, Stanley, Eleanor J, Antoun, Nagui M, Coghlan, Avril, Harsha, Bhavana, Traini, Alessandra, Ribeiro, Diogo M, Steinbiss, Sascha, Lucas, Sebastian B, Allinson, Kieren SJ, Price, Stephen J, Santarius, Thomas S, Carmichael, Andrew J, Chiodini, Peter L, Holroyd, Nancy, Dean, Andrew F, Berriman, Matthew
Publicado no Genome Biol (2014)

The Genome Sequence of Caenorhabditis briggsae: A Platform for Comparative Genomics

Por Stein, Lincoln D, Bao, Zhirong, Blasiar, Darin, Blumenthal, Thomas, Brent, Michael R, Chen, Nansheng, Chinwalla, Asif, Clarke, Laura, Clee, Chris, Coghlan, Avril, Coulson, Alan, D'Eustachio, Peter, Fitch, David H. A, Fulton, Lucinda A, Fulton, Robert E, Griffiths-Jones, Sam, Harris, Todd W, Hillier, LaDeana W, Kamath, Ravi, Kuwabara, Patricia E, Mardis, Elaine R, Marra, Marco A, Miner, Tracie L, Minx, Patrick, Mullikin, James C, Plumb, Robert W, Rogers, Jane, Schein, Jacqueline E, Sohrmann, Marc, Spieth, John, Stajich, Jason E, Wei, Chaochun, Willey, David, Wilson, Richard K, Durbin, Richard, Waterston, Robert H
Publicado em 2003

The Genomic Basis of Parasitism in the Strongyloides Clade of Nematodes

Por Hunt, Vicky L., Tsai, Isheng J., Coghlan, Avril, Reid, Adam J., Holroyd, Nancy, Foth, Bernardo J., Tracey, Alan, Cotton, James A., Stanley, Eleanor J., Beasley, Helen, Bennett, Hayley M., Brooks, Karen, Harsha, Bhavana, Kajitani, Rei, Kulkarni, Arpita, Harbecke, Dorothee, Nagayasu, Eiji, Nichol, Sarah, Ogura, Yoshitoshi, Quail, Michael A., Randle, Nadine, Xia, Dong, Brattig, Norbert W., Soblik, Hanns, Ribeiro, Diogo M., Sanchez-Flores, Alejandro, Hayashi, Tetsuya, Itoh, Takehiko, Denver, Dee R., Grant, Warwick, Stoltzfus, Jonathan D., Lok, James B., Murayama, Haruhiko, Wastling, Jonathan, Streit, Adrian, Kikuchi, Taisei, Viney, Mark, Berriman, Matthew
Publicado no Nat Genet (2016)

The genome of the blood fluke Schistosoma mansoni

Por Berriman, Matthew, Haas, Brian J., LoVerde, Philip T., Wilson, R. Alan, Dillon, Gary P., Cerqueira, Gustavo C., Mashiyama, Susan T., Al-Lazikani, Bissan, Andrade, Luiza F., Ashton, Peter D., Aslett, Martin A., Bartholomeu, Daniella C., Blandin, Gaelle, Caffrey, Conor R., Coghlan, Avril, Coulson, Richard, Day, Tim A., Delcher, Art, DeMarco, Ricardo, Djikeng, Appoliniare, Eyre, Tina, Gamble, John A., Ghedin, Elodie, Gu, Yong, Hertz-Fowler, Christiane, Hirai, Hirohisha, Hirai, Yuriko, Houston, Robin, Ivens, Alasdair, Johnston, David A., Lacerda, Daniela, Macedo, Camila D., McVeigh, Paul, Ning, Zemin, Oliveira, Guilherme, Overington, John P., Parkhill, Julian, Pertea, Mihaela, Pierce, Raymond J., Protasio, Anna V., Quail, Michael A., Rajandream, Marie-Adèle, Rogers, Jane, Sajid, Mohammed, Salzberg, Steven L., Stanke, Mario, Tivey, Adrian R., White, Owen, Williams, David L., Wortman, Jennifer, Wu, Wenjie, Zamanian, Mostafa, Zerlotini, Adhemar, Fraser-Liggett, Claire M., Barrell, Barclay G., El-Sayed, Najib M.
Publicado em 2009