Structure of Apolipoprotein A-I N Terminus on Nascent High Density Lipoproteins

le Lagerstedt, Jens O., Cavigiolio, Giorgio, Budamagunta, Madhu S., Pagani, Ioanna, Voss, John C., Oda, Michael N.
Foilsithe 2011

Modifying Apolipoprotein A-I by Malondialdehyde, but Not by an Array of Other Reactive Carbonyls, Blocks Cholesterol Efflux by the ABCA1 Pathway

le Shao, Baohai, Pennathur, Subramaniam, Pagani, Ioanna, Oda, Michael N., Witztum, Joseph L., Oram, John F., Heinecke, Jay W.
Foilsithe 2010

The Genomes OnLine Database (GOLD) v.4: status of genomic and metagenomic projects and their associated metadata

le Pagani, Ioanna, Liolios, Konstantinos, Jansson, Jakob, Chen, I-Min A., Smirnova, Tatyana, Nosrat, Bahador, Markowitz, Victor M., Kyrpides, Nikos C.
Foilsithe 2012

The Genomes OnLine Database (GOLD) v.5: a metadata management system based on a four level (meta)genome project classification

le Reddy, T.B.K., Thomas, Alex D., Stamatis, Dimitri, Bertsch, Jon, Isbandi, Michelle, Jansson, Jakob, Mallajosyula, Jyothi, Pagani, Ioanna, Lobos, Elizabeth A., Kyrpides, Nikos C.
Foilsithe in Nucleic Acids Res (2014)

The Metadata Coverage Index (MCI): A standardized metric for quantifying database metadata richness

le Liolios, Konstantinos, Schriml, Lynn, Hirschman, Lynette, Pagani, Ioanna, Nosrat, Bahador, Sterk, Peter, White, Owen, Rocca-Serra, Philippe, Sansone, Susanna-Assunta, Taylor, Chris, Kyrpides, Nikos C., Field, Dawn
Foilsithe 2012

IMG/M-HMP: A Metagenome Comparative Analysis System for the Human Microbiome Project

le Markowitz, Victor M., Chen, I-Min A., Chu, Ken, Szeto, Ernest, Palaniappan, Krishna, Jacob, Biju, Ratner, Anna, Liolios, Konstantinos, Pagani, Ioanna, Huntemann, Marcel, Mavromatis, Konstantinos, Ivanova, Natalia N., Kyrpides, Nikos C.
Foilsithe 2012

Genome sequence of Ensifer medicae strain WSM1115; an acid-tolerant Medicago-nodulating microsymbiont from Samothraki, Greece

le Reeve, Wayne, Ballard, Ross, Howieson, John, Drew, Elizabeth, Tian, Rui, Bräu, Lambert, Munk, Christine, Davenport, Karen, Chain, Patrick, Goodwin, Lynne, Pagani, Ioanna, Huntemann, Marcel, Mavrommatis, Konstantinos, Pati, Amrita, Markowitz, Victor, Ivanova, Natalia, Woyke, Tanja, Kyrpides, Nikos
Foilsithe 2013

IMG/M: the integrated metagenome data management and comparative analysis system

le Markowitz, Victor M., Chen, I-Min A., Chu, Ken, Szeto, Ernest, Palaniappan, Krishna, Grechkin, Yuri, Ratner, Anna, Jacob, Biju, Pati, Amrita, Huntemann, Marcel, Liolios, Konstantinos, Pagani, Ioanna, Anderson, Iain, Mavromatis, Konstantinos, Ivanova, Natalia N., Kyrpides, Nikos C.
Foilsithe 2012

Metagenomic analysis of microbial consortium from natural crude oil that seeps into the marine ecosystem offshore Southern California

le Hawley, Erik R., Piao, Hailan, Scott, Nicole M., Malfatti, Stephanie, Pagani, Ioanna, Huntemann, Marcel, Chen, Amy, Glavina del Rio, Tijana, Foster, Brian, Copeland, Alex, Jansson, Janet, Pati, Amrita, Tringe, Susannah, Gilbert, Jack A., Lorenson, Thomas D., Hess, Matthias
Foilsithe 2014

Permanent Draft Genome Sequence of Nocardia sp. BMG111209, an Actinobacterium Isolated from Nodules of Casuarina glauca

le Ghodhbane-Gtari, Faten, Beauchemin, Nicholas, Gueddou, Abdellatif, Hezbri, Karima, Ktari, Amir, Louati, Moussa, Nouioui, Imen, Chen, Amy, Huntemann, Marcel, Ivanova, Natalia, Kyrpides, Nikos, Markowitz, Victor, Mavrommatis, Kostas, Pagani, Ioanna, Sen, Arnab, Wall, Luis, Woyke, Tanja, Gtari, Maher, Tisa, Louis S.
Foilsithe in Genome Announc (2016)

Permanent Improved High-Quality Draft Genome Sequence of Nocardia casuarinae Strain BMG51109, an Endophyte of Actinorhizal Root Nodules of Casuarina glauca

le Ghodhbane-Gtari, Faten, Beauchemin, Nicholas, Louati, Moussa, Nouioui, Imen, Ktari, Amir, Hezbri, Karima, Gueddou, Abdellatif, Chen, Amy, Huntemann, Marcel, Ivanova, Natalia, Kyrpides, Nikos, Markowitz, Victor, Mavrommatis, Kostas, Pagani, Ioanna, Sen, Arnab, Wall, Luis, Woyke, Tanja, Gtari, Maher, Tisa, Louis S.
Foilsithe in Genome Announc (2016)

IMG/M 4 version of the integrated metagenome comparative analysis system

le Markowitz, Victor M., Chen, I-Min A., Chu, Ken, Szeto, Ernest, Palaniappan, Krishna, Pillay, Manoj, Ratner, Anna, Huang, Jinghua, Pagani, Ioanna, Tringe, Susannah, Huntemann, Marcel, Billis, Konstantinos, Varghese, Neha, Tennessen, Kristin, Mavromatis, Konstantinos, Pati, Amrita, Ivanova, Natalia N., Kyrpides, Nikos C.
Foilsithe 2014

Complete genome sequence of Halopiger xanaduensis type strain (SH-6(T))

le Anderson, Iain, Tindall, Brian J., Rohde, Manfred, Lucas, Susan, Han, James, Lapidus, Alla, Cheng, Jan-Fang, Goodwin, Lynne, Pitluck, Sam, Peters, Lin, Pati, Amrita, Mikhailova, Natalia, Pagani, Ioanna, Teshima, Hazuki, Han, Cliff, Tapia, Roxanne, Land, Miriam, Woyke, Tanja, Klenk, Hans-Peter, Kyrpides, Nikos, Ivanova, Natalia
Foilsithe 2012

Complete genome sequence of Dehalobacter restrictus PER-K23(T)

le Kruse, Thomas, Maillard, Julien, Goodwin, Lynne, Woyke, Tanja, Teshima, Hazuki, Bruce, David, Detter, Chris, Tapia, Roxanne, Han, Cliff, Huntemann, Marcel, Wei, Chia-Lin, Han, James, Chen, Amy, Kyrpides, Nikos, Szeto, Ernest, Markowitz, Victor, Ivanova, Natalia, Pagani, Ioanna, Pati, Amrita, Pitluck, Sam, Nolan, Matt, Holliger, Christof, Smidt, Hauke
Foilsithe 2013

Complete genome sequence of Arthrobacter phenanthrenivorans type strain (Sphe3)

le Kallimanis, Aristeidis, LaButti, Kurt M., Lapidus, Alla, Clum, Alicia, Lykidis, Athanasios, Mavromatis, Kostantinos, Pagani, Ioanna, Liolios, Konstantinos, Ivanova, Natalia, Goodwin, Lynne, Pitluck, Sam, Chen, Amy, Palaniappan, Krishna, Markowitz, Victor, Bristow, Jim, Velentzas, Athanasios D., Perisynakis, Angelos, Ouzounis, Christos C, Kyrpides, Nikos C., Koukkou, Anna I., Drainas, Constantin
Foilsithe 2011

Complete Genome of Enterobacteriaceae Bacterium Strain FGI 57, a Strain Associated with Leaf-Cutter Ant Fungus Gardens

le Aylward, Frank O., Tremmel, Daniel M., Bruce, David C., Chain, Patrick, Chen, Amy, Walston Davenport, Karen, Detter, Chris, Han, Cliff S., Han, James, Huntemann, Marcel, Ivanova, Natalia N., Kyrpides, Nikos C., Markowitz, Victor, Mavrommatis, Kostas, Nolan, Matt, Pagani, Ioanna, Pati, Amrita, Pitluck, Sam, Deshpande, Shweta, Goodwin, Lynne, Woyke, Tanja, Currie, Cameron R.
Foilsithe 2013

Complete genome sequence of Serratia plymuthica strain AS12

le Neupane, Saraswoti, Finlay, Roger D., Alström, Sadhna, Goodwin, Lynne, Kyrpides, Nikos C., Lucas, Susan, Lapidus, Alla, Bruce, David, Pitluck, Sam, Peters, Lin, Ovchinnikova, Galina, Chertkov, Olga, Han, James, Han, Cliff, Tapia, Roxanne, Detter, John C., Land, Miriam, Hauser, Loren, Cheng, Jan-Fang, Ivanova, Natalia, Pagani, Ioanna, Klenk, Hans-Peter, Woyke, Tanja, Högberg, Nils
Foilsithe 2012

Complete Genome Sequence of the Thermophilic, Piezophilic, Heterotrophic Bacterium Marinitoga piezophila KA3

le Lucas, Susan, Han, James, Lapidus, Alla, Cheng, Jan-Fang, Goodwin, Lynne A., Pitluck, Sam, Peters, Lin, Mikhailova, Natalia, Teshima, Hazuki, Detter, John C., Han, Cliff, Tapia, Roxanne, Land, Miriam, Hauser, Loren, Kyrpides, Nikos C., Ivanova, Natalia, Pagani, Ioanna, Vannier, Pauline, Oger, Phil, Bartlett, Douglas H., Noll, Kenneth M., Woyke, Tanja, Jebbar, Mohamed
Foilsithe 2012

Complete genome sequence of the plant-associated Serratia plymuthica strain AS13

le Neupane, Saraswoti, Finlay, Roger D., Kyrpides, Nikos C., Goodwin, Lynne, Alström, Sadhna, Lucas, Susan, Land, Miriam, Han, James, Lapidus, Alla, Cheng, Jan-Fang, Bruce, David, Pitluck, Sam, Peters, Lin, Ovchinnikova, Galina, Held, Brittany, Han, Cliff, Detter, John C., Tapia, Roxanne, Hauser, Loren, Ivanova, Natalia, Pagani, Ioanna, Woyke, Tanja, Klenk, Hans-Peter, Högberg, Nils
Foilsithe 2012

Genome Sequence of Streptomyces viridosporus Strain T7A ATCC 39115, a Lignin-Degrading Actinomycete

le Davis, Jennifer R., Goodwin, Lynne, Teshima, Hazuki, Detter, Chris, Tapia, Roxanne, Han, Cliff, Huntemann, Marcel, Wei, Chia-Lin, Han, James, Chen, Amy, Kyrpides, Nikos, Mavrommatis, Kostas, Szeto, Ernest, Markowitz, Victor, Ivanova, Natalia, Mikhailova, Natalia, Ovchinnikova, Galina, Pagani, Ioanna, Pati, Amrita, Woyke, Tanja, Pitluck, Sam, Peters, Lin, Nolan, Matt, Land, Miriam, Sello, Jason K.
Foilsithe 2013