Microbial Diversity for Biotechnology

Tekijä Tsiamis, George, Karpouzas, Dimitrios, Cherif, Ameur, Mavrommatis, Konstantinos
Julkaistu 2014

The M5nr: a novel non-redundant database containing protein sequences and annotations from multiple sources and associated tools

Tekijä Wilke Andreas, Harrison Travis, Wilkening Jared, Field Dawn, Glass Elizabeth M, Kyrpides Nikos, Mavrommatis Konstantinos, Meyer Folker
Julkaistu 2012-06-01

The M5nr: a novel non-redundant database containing protein sequences and annotations from multiple sources and associated tools

Tekijä Wilke, Andreas, Harrison, Travis, Wilkening, Jared, Field, Dawn, Glass, Elizabeth M, Kyrpides, Nikos, Mavrommatis, Konstantinos, Meyer, Folker
Julkaistu 2012

Genome sequence of Burkholderia mimosarum strain LMG 23256(T), a Mimosa pigra microsymbiont from Anso, Taiwan

Tekijä Willems, Anne, Tian, Rui, Bräu, Lambert, Goodwin, Lynne, Han, James, Liolios, Konstantinos, Huntemann, Marcel, Pati, Amrita, Woyke, Tanja, Mavrommatis, Konstantinos, Markowitz, Victor, Ivanova, Natalia, Kyrpides, Nikos, Reeve, Wayne
Julkaistu 2013

Importance of Propionibacterium acnes hemolytic activity in human intervertebral discs: A microbiological study

Tekijä Capoor, Manu N., Ruzicka, Filip, Sandhu, Gurpreet, Rollason, Jess, Mavrommatis, Konstantinos, Ahmed, Fahad S., Schmitz, Jonathan E., Raz, Assaf, Brüggemann, Holger, Lambert, Peter A., Fischetti, Vincent A., Slaby, Ondrej
Julkaisussa PLoS One (2018)

Impact of somatic mutations on response to lenalidomide in lower-risk non-del(5q) myelodysplastic syndromes patients

Tekijä Santini, Valeria, Fenaux, Pierre, Giagounidis, Aristoteles, Platzbecker, Uwe, List, Alan F., Haferlach, Torsten, Zhong, Jim, Wu, Chengqing, Mavrommatis, Konstantinos, Beach, C. L., MacBeth, Kyle J., Almeida, Antonio
Julkaisussa Leukemia (2020)

Genome sequence of the Medicago-nodulating Ensifer meliloti commercial inoculant strain RRI128

Tekijä Reeve, Wayne, Ballard, Ross, Drew, Elizabeth, Tian, Rui, Bräu, Lambert, Goodwin, Lynne, Huntemann, Marcel, Han, James, Tatiparthi, Reddy, Chen, Amy, Mavrommatis, Konstantinos, Markowitz, Victor, Palaniappan, Krishna, Ivanova, Natalia, Pati, Amrita, Woyke, Tanja, Kyrpides, Nikos
Julkaistu 2014

Genome sequence of Rhizobium leguminosarum bv trifolii strain WSM1689, the microsymbiont of the one flowered clover Trifolium uniflorum

Tekijä Terpolilli, Jason, Rui, Tian, Yates, Ron, Howieson, John, Poole, Philip, Munk, Christine, Tapia, Roxanne, Han, Cliff, Markowitz, Victor, Tatiparthi, Reddy, Mavrommatis, Konstantinos, Ivanova, Natalia, Pati, Amrita, Goodwin, Lynne, Woyke, Tanja, Kyrpides, Nikos, Reeve, Wayne
Julkaistu 2013

Genome sequence of Ensifer arboris strain LMG 14919(T); a microsymbiont of the legume Prosopis chilensis growing in Kosti, Sudan

Tekijä Reeve, Wayne, Tian, Rui, Bräu, Lambert, Goodwin, Lynne, Munk, Christine, Detter, Chris, Tapia, Roxanne, Han, Cliff, Liolios, Konstantinos, Huntemann, Marcel, Pati, Amrita, Woyke, Tanja, Mavrommatis, Konstantinos, Markowitz, Victor, Ivanova, Natalia, Kyrpides, Nikos, Willems, Anne
Julkaistu 2013

Genome sequence of Ensifer medicae strain WSM1115; an acid-tolerant Medicago-nodulating microsymbiont from Samothraki, Greece

Tekijä Reeve, Wayne, Ballard, Ross, Howieson, John, Drew, Elizabeth, Tian, Rui, Bräu, Lambert, Munk, Christine, Davenport, Karen, Chain, Patrick, Goodwin, Lynne, Pagani, Ioanna, Huntemann, Marcel, Mavrommatis, Konstantinos, Pati, Amrita, Markowitz, Victor, Ivanova, Natalia, Woyke, Tanja, Kyrpides, Nikos
Julkaistu 2013

Insights into secondary metabolism from a global analysis of prokaryotic biosynthetic gene clusters

Tekijä Cimermancic, Peter, Medema, Marnix H., Claesen, Jan, Kurita, Kenji, Wieland Brown, Laura C., Mavrommatis, Konstantinos, Pati, Amrita, Godfrey, Paul A., Koehrsen, Michael, Clardy, Jon, Birren, Bruce W., Takano, Eriko, Sali, Andrej, Linington, Roger G., Fischbach, Michael A.
Julkaistu 2014

Microhomology-mediated end joining drives complex rearrangements and overexpression of MYC and PVT1 in multiple myeloma

Tekijä Mikulasova, Aneta, Ashby, Cody, Tytarenko, Ruslana G., Qu, Pingping, Rosenthal, Adam, Dent, Judith A., Ryan, Katie R., Bauer, Michael A., Wardell, Christopher P., Hoering, Antje, Mavrommatis, Konstantinos, Trotter, Matthew, Deshpande, Shayu, Yaccoby, Shmuel, Tian, Erming, Keats, Jonathan, Auclair, Daniel, Jackson, Graham H., Davies, Faith E., Thakurta, Anjan, Morgan, Gareth J., Walker, Brian A.
Julkaisussa Haematologica (2020)

Complete Genome Sequence of Desulfurococcus fermentans, a Hyperthermophilic Cellulolytic Crenarchaeon Isolated from a Freshwater Hot Spring in Kamchatka, Russia

Tekijä Susanti, Dwi, Johnson, Eric F., Rodriguez, Jason R., Anderson, Iain, Perevalova, Anna A., Kyrpides, Nikos, Lucas, Susan, Han, James, Lapidus, Alla, Cheng, Jan-Fang, Goodwin, Lynne, Pitluck, Sam, Mavrommatis, Konstantinos, Peters, Lin, Land, Miriam L., Hauser, Loren, Gopalan, Venkat, Chan, Patricia P., Lowe, Todd M., Atomi, Haruyuki, Bonch-Osmolovskaya, Elizaveta A., Woyke, Tanja, Mukhopadhyay, Biswarup
Julkaistu 2012

Prevalence of Propionibacterium acnes in Intervertebral Discs of Patients Undergoing Lumbar Microdiscectomy: A Prospective Cross-Sectional Study

Tekijä Capoor, Manu N., Ruzicka, Filip, Machackova, Tana, Jancalek, Radim, Smrcka, Martin, Schmitz, Jonathan E., Hermanova, Marketa, Sana, Jiri, Michu, Elleni, Baird, John C., Ahmed, Fahad S., Maca, Karel, Lipina, Radim, Alamin, Todd F., Coscia, Michael F., Stonemetz, Jerry L., Witham, Timothy, Ehrlich, Garth D., Gokaslan, Ziya L., Mavrommatis, Konstantinos, Birkenmaier, Christof, Fischetti, Vincent A., Slaby, Ondrej
Julkaisussa PLoS One (2016)

Whole Genome Sequencing of Thermus oshimai JL-2 and Thermus thermophilus JL-18, Incomplete Denitrifiers from the United States Great Basin

Tekijä Murugapiran, Senthil K., Huntemann, Marcel, Wei, Chia-Lin, Han, James, Detter, John C., Han, Cliff S., Erkkila, Tracy H., Teshima, Hazuki, Chen, Amy, Kyrpides, Nikos, Mavrommatis, Konstantinos, Markowitz, Victor, Szeto, Ernest, Ivanova, Natalia, Pagani, Ioanna, Lam, Jenny, McDonald, Austin I., Dodsworth, Jeremy A., Pati, Amrita, Goodwin, Lynne, Peters, Lin, Pitluck, Sam, Woyke, Tanja, Hedlund, Brian P.
Julkaistu 2013

Thermus oshimai JL-2 and T. thermophilus JL-18 genome analysis illuminates pathways for carbon, nitrogen, and sulfur cycling

Tekijä Murugapiran, Senthil K., Huntemann, Marcel, Wei, Chia-Lin, Han, James, Detter, J. C., Han, Cliff, Erkkila, Tracy H., Teshima, Hazuki, Chen, Amy, Kyrpides, Nikos, Mavrommatis, Konstantinos, Markowitz, Victor, Szeto, Ernest, Ivanova, Natalia, Pagani, Ioanna, Pati, Amrita, Goodwin, Lynne, Peters, Lin, Pitluck, Sam, Lam, Jenny, McDonald, Austin I., Dodsworth, Jeremy A., Woyke, Tanja, Hedlund, Brian P.
Julkaistu 2013

Complete genome sequence of Brachybacterium faecium type strain (Schefferle 6-10(T))

Tekijä Lapidus, Alla, Pukall, Rüdiger, LaButtii, Kurt, Copeland, Alex, Del Rio, Tijana Glavina, Nolan, Matt, Chen, Feng, Lucas, Susan, Tice, Hope, Cheng, Jan-Fang, Bruce, David, Goodwin, Lynne, Pitluck, Sam, Rohde, Manfred, Göker, Markus, Pati, Amrita, Ivanova, Natalia, Mavrommatis, Konstantinos, Chen, Amy, Palaniappan, Krishna, D'haeseleer, Patrik, Chain, Patrick, Bristow, Jim, Eisen, Jonathan A., Markowitz, Victor, Hugenholtz, Philip, Kyrpides, Nikos C., Klenk, Hans-Peter
Julkaistu 2009

Genome sequence of the lupin-nodulating Bradyrhizobium sp. strain WSM1417

Tekijä Reeve, Wayne, Terpolilli, Jason, Melino, Vanessa, Ardley, Julie, Tian, Rui, De Meyer, Sofie, Tiwari, Ravi, Yates, Ronald, O’Hara, Graham, Howieson, John, Ninawi, Mohamed, Teshima, Hazuki, Bruce, David, Detter, Chris, Tapia, Roxanne, Han, Cliff, Wei, Chia-Lin, Huntemann, Marcel, Han, James, Chen, I-Min, Mavrommatis, Konstantinos, Markowitz, Victor, Ivanova, Natalia, Ovchinnikova, Galina, Pagani, Ioanna, Pati, Amrita, Goodwin, Lynne, Peters, Lin, Woyke, Tanja, Kyrpides, Nikos
Julkaistu 2013

Complete genome sequence of Kytococcus sedentarius type strain (541(T))

Tekijä Sims, David, Brettin, Thomas, Detter, John C., Han, Cliff, Lapidus, Alla, Copeland, Alex, Glavina Del Rio, Tijana, Nolan, Matt, Chen, Feng, Lucas, Susan, Tice, Hope, Cheng, Jan-Fang, Bruce, David, Goodwin, Lynne, Pitluck, Sam, Ovchinnikova, Galina, Pati, Amrita, Ivanova, Natalia, Mavrommatis, Konstantinos, Chen, Amy, Palaniappan, Krishna, D'haeseleer, Patrik, Chain, Patrick, Bristow, Jim, Eisen, Jonathan A., Markowitz, Victor, Hugenholtz, Philip, Schneider, Susanne, Göker, Markus, Pukall, Rüdiger, Kyrpides, Nikos C., Klenk, Hans-Peter
Julkaistu 2009

Complete genome sequence of Acidimicrobium ferrooxidans type strain (ICP(T))

Tekijä Clum, Alicia, Nolan, Matt, Lang, Elke, Glavina Del Rio, Tijana, Tice, Hope, Copeland, Alex, Cheng, Jan-Fang, Lucas, Susan, Chen, Feng, Bruce, David, Goodwin, Lynne, Pitluck, Sam, Ivanova, Natalia, Mavrommatis, Konstantinos, Mikhailova, Natalia, Pati, Amrita, Chen, Amy, Palaniappan, Krishna, Göker, Markus, Spring, Stefan, Land, Miriam, Hauser, Loren, Chang, Yun-Juan, Jeffries, Cynthia C., Chain, Patrick, Bristow, Jim, Eisen, Jonathan A., Markowitz, Victor, Hugenholtz, Philip, Kyrpides, Nikos C., Klenk, Hans-Peter, Lapidus, Alla
Julkaistu 2009