Microbial co-habitation and lateral gene transfer: what transposases can tell us

Autor Hooper, Sean D, Mavromatis, Konstantinos, Kyrpides, Nikos C
Vydáno 2009

The Genomes On Line Database (GOLD) in 2007: status of genomic and metagenomic projects and their associated metadata

Autor Liolios, Konstantinos, Mavromatis, Konstantinos, Tavernarakis, Nektarios, Kyrpides, Nikos C.
Vydáno 2008

A Bioinformatician's Guide to Metagenomics

Autor Kunin, Victor, Copeland, Alex, Lapidus, Alla, Mavromatis, Konstantinos, Hugenholtz, Philip
Vydáno 2008

Comparative Transcriptomics between Synechococcus PCC 7942 and Synechocystis PCC 6803 Provide Insights into Mechanisms of Stress Acclimation

Autor Billis, Konstantinos, Billini, Maria, Tripp, H. James, Kyrpides, Nikos C., Mavromatis, Konstantinos
Vydáno 2014

Cloning, Sequences, and Characterization of Two Chitinase Genes from the Antarctic Arthrobacter sp. Strain TAD20: Isolation and Partial Characterization of the Enzymes

Autor Lonhienne, Thierry, Mavromatis, Konstantinos, Vorgias, Constantin E., Buchon, Laurent, Gerday, Charles, Bouriotis, Vassilis
Vydáno 2001

Integration of phenotypic metadata and protein similarity in Archaea using a spectral bipartitioning approach

Autor Hooper, Sean D., Anderson, Iain J., Pati, Amrita, Dalevi, Daniel, Mavromatis, Konstantinos, Kyrpides, Nikos C.
Vydáno 2009

Gene Context Analysis in the Integrated Microbial Genomes (IMG) Data Management System

Autor Mavromatis, Konstantinos, Chu, Ken, Ivanova, Natalia, Hooper, Sean D., Markowitz, Victor M., Kyrpides, Nikos C.
Vydáno 2009

Estimating DNA coverage and abundance in metagenomes using a gamma approximation

Autor Hooper, Sean D., Dalevi, Daniel, Pati, Amrita, Mavromatis, Konstantinos, Ivanova, Natalia N., Kyrpides, Nikos C.
Vydáno 2010

The DOE-JGI Standard Operating Procedure for the Annotations of Microbial Genomes

Autor Mavromatis, Konstantinos, Ivanova, Natalia N., Chen, I-Min A., Szeto, Ernest, Markowitz, Victor M., Kyrpides, Nikos C.
Vydáno 2009

The Genomes On Line Database (GOLD) in 2009: status of genomic and metagenomic projects and their associated metadata

Autor Liolios, Konstantinos, Chen, I-Min A., Mavromatis, Konstantinos, Tavernarakis, Nektarios, Hugenholtz, Philip, Markowitz, Victor M., Kyrpides, Nikos C.
Vydáno 2010

Comparative Genomic Analysis of Phylogenetically Closely Related Hydrogenobaculum sp. Isolates from Yellowstone National Park

Autor Romano, Christine, D'Imperio, Seth, Woyke, Tanja, Mavromatis, Konstantinos, Lasken, Roger, Shock, Everett L., McDermott, Timothy R.
Vydáno 2013

Improving Microbial Genome Annotations in an Integrated Database Context

Autor Chen, I-Min A., Markowitz, Victor M., Chu, Ken, Anderson, Iain, Mavromatis, Konstantinos, Kyrpides, Nikos C., Ivanova, Natalia N.
Vydáno 2013

Complete genome sequence of “Thioalkalivibrio sulfidophilus” HL-EbGr7

Autor Muyzer, Gerard, Sorokin, Dimitry Yu, Mavromatis, Konstantinos, Lapidus, Alla, Clum, Alicia, Ivanova, Natalia, Pati, Amrita, d'Haeseleer, Patrick, Woyke, Tanja, Kyrpides, Nikos C.
Vydáno 2011

Metagenomes of tropical soil-derived anaerobic switchgrass-adapted consortia with and without iron

Autor DeAngelis, Kristen M., D’Haeseleer, Patrik, Chivian, Dylan, Simmons, Blake, Arkin, Adam P., Mavromatis, Konstantinos, Malfatti, Stephanie, Tringe, Susannah, Hazen, Terry C.
Vydáno 2013

Genome Analysis of the Anaerobic Thermohalophilic Bacterium Halothermothrix orenii

Autor Mavromatis, Konstantinos, Ivanova, Natalia, Anderson, Iain, Lykidis, Athanasios, Hooper, Sean D., Sun, Hui, Kunin, Victor, Lapidus, Alla, Hugenholtz, Philip, Patel, Bharat, Kyrpides, Nikos C.
Vydáno 2009

Complete genome sequence of Thioalkalivibrio sp. K90mix

Autor Muyzer, Gerard, Sorokin, Dimitry Y., Mavromatis, Konstantinos, Lapidus, Alla, Foster, Brian, Sun, Hui, Ivanova, Natalia, Pati, Amrita, D'haeseleer, Patrik, Woyke, Tanja, Kyrpides, Nikos C.
Vydáno 2011

High quality draft genome sequence of Olivibacter sitiensis type strain (AW-6(T)), a diphenol degrader with genes involved in the catechol pathway

Autor Ntougias, Spyridon, Lapidus, Alla, Han, James, Mavromatis, Konstantinos, Pati, Amrita, Chen, Amy, Klenk, Hans-Peter, Woyke, Tanja, Fasseas, Constantinos, Kyrpides, Nikos C., Zervakis, Georgios I.
Vydáno 2014

Genome Sequence of Stenotrophomonas maltophilia PML168, Which Displays Baeyer-Villiger Monooxygenase Activity

Autor Allen, Michael J., Tait, Karen, Mühling, Martin, Weynberg, Karen, Bradley, Claire, Trivedi, Urmi, Gharbi, Karim, Nissimov, Jozef, Mavromatis, Konstantinos, Jensen, Chantel N., Grogan, Gideon, Ali, Sohail T.
Vydáno 2012

Genome Sequence and Analysis of the Soil Cellulolytic Actinomycete Thermobifida fusca YX

Autor Lykidis, Athanasios, Mavromatis, Konstantinos, Ivanova, Natalia, Anderson, Iain, Land, Miriam, DiBartolo, Genevieve, Martinez, Michele, Lapidus, Alla, Lucas, Susan, Copeland, Alex, Richardson, Paul, Wilson, David B., Kyrpides, Nikos
Vydáno 2007

The integrated microbial genomes (IMG) system in 2007: data content and analysis tool extensions

Autor Markowitz, Victor M., Szeto, Ernest, Palaniappan, Krishna, Grechkin, Yuri, Chu, Ken, Chen, I-Min A., Dubchak, Inna, Anderson, Iain, Lykidis, Athanasios, Mavromatis, Konstantinos, Ivanova, Natalia N., Kyrpides, Nikos C.
Vydáno 2008