Analysis of H3K4me3 and H3K27me3 bivalent promotors in HER2+ breast cancer cell lines reveals variations depending on estrogen receptor status and significantly correlates with gen...

nork Kaukonen, Damien, Kaukonen, Riina, Polit, Lélia, Hennessy, Bryan T., Lund, Riikka, Madden, Stephen F.
Argitaratua izan da BMC Med Genomics (2020)

Gut Microbiota as an Epigenetic Regulator: Pilot Study Based on Whole-Genome Methylation Analysis

nork Kumar, Himanshu, Lund, Riikka, Laiho, Asta, Lundelin, Krista, Ley, Ruth E., Isolauri, Erika, Salminen, Seppo
Argitaratua izan da mBio (2014)

Expression of human pim family genes is selectively up-regulated by cytokines promoting T helper type 1, but not T helper type 2, cell differentiation

nork Aho, Teija L T, Lund, Riikka J, Ylikoski, Emmi K, Matikainen, Sampsa, Lahesmaa, Riitta, Koskinen, Päivi J
Argitaratua 2005

Evaluation of tools for identifying large copy number variations from ultra-low-coverage whole-genome sequencing data

nork Smolander, Johannes, Khan, Sofia, Singaravelu, Kalaimathy, Kauko, Leni, Lund, Riikka J., Laiho, Asta, Elo, Laura L.
Argitaratua izan da BMC Genomics (2021)

Lack of Decorin Expression by Human Bladder Cancer Cells Offers New Tools in the Therapy of Urothelial Malignancies

nork Sainio, Annele, Nyman, Marie, Lund, Riikka, Vuorikoski, Sanna, Boström, Pia, Laato, Matti, Boström, Peter J., Järveläinen, Hannu
Argitaratua 2013

Epigenomic landscapes of hESC-derived neural rosettes: modeling neural tube formation and diseases

nork Valensisi, Cristina, Andrus, Colin, Buckberry, Sam, Jayavelu, Naresh Doni, Lund, Riikka J., Lister, Ryan, Hawkins, R. David
Argitaratua izan da Cell Rep (2017)

Decorin in Human Colon Cancer: Localization In Vivo and Effect on Cancer Cell Behavior In Vitro

nork Nyman, Marie C., Sainio, Annele O., Pennanen, Mirka M., Lund, Riikka J., Vuorikoski, Sanna, Sundström, Jari T. T., Järveläinen, Hannu T.
Argitaratua izan da J Histochem Cytochem (2015)

High-throughput karyotyping of human pluripotent stem cells

nork Lund, Riikka J., Nikula, Tuomas, Rahkonen, Nelly, Närvä, Elisa, Baker, Duncan, Harrison, Neil, Andrews, Peter, Otonkoski, Timo, Lahesmaa, Riitta
Argitaratua 2012

A Novel Feeder-Free Culture System for Human Pluripotent Stem Cell Culture and Induced Pluripotent Stem Cell Derivation

nork Vuoristo, Sanna, Toivonen, Sanna, Weltner, Jere, Mikkola, Milla, Ustinov, Jarkko, Trokovic, Ras, Palgi, Jaan, Lund, Riikka, Tuuri, Timo, Otonkoski, Timo
Argitaratua 2013

Identification of global regulators of T-helper cell lineage specification

nork Kanduri, Kartiek, Tripathi, Subhash, Larjo, Antti, Mannerström, Henrik, Ullah, Ubaid, Lund, Riikka, Hawkins, R. David, Ren, Bing, Lähdesmäki, Harri, Lahesmaa, Riitta
Argitaratua izan da Genome Med (2015)

DNA methylation and Transcriptome Changes Associated with Cisplatin Resistance in Ovarian Cancer

nork Lund, Riikka J., Huhtinen, Kaisa, Salmi, Jussi, Rantala, Juha, Nguyen, Elizabeth V., Moulder, Robert, Goodlett, David R., Lahesmaa, Riitta, Carpén, Olli
Argitaratua izan da Sci Rep (2017)

Methylome Analysis of Human Bone Marrow MSCs Reveals Extensive Age- and Culture-Induced Changes at Distal Regulatory Elements

nork Pasumarthy, Kalyan K., Doni Jayavelu, Naresh, Kilpinen, Lotta, Andrus, Colin, Battle, Stephanie L., Korhonen, Matti, Lehenkari, Petri, Lund, Riikka, Laitinen, Saara, Hawkins, R. David
Argitaratua izan da Stem Cell Reports (2017)

RNA-Binding Protein L1TD1 Interacts with LIN28 via RNA and is Required for Human Embryonic Stem Cell Self-Renewal and Cancer Cell Proliferation

nork Närvä, Elisa, Rahkonen, Nelly, Emani, Maheswara Reddy, Lund, Riikka, Pursiheimo, Huha-Pekka, Nästi, Juuso, Autio, Reija, Rasool, Omid, Denessiouk, Konstantin, Lähdesmäki, Harri, Rao, Anjana, Lahesmaa, Ritta
Argitaratua 2012

Continuous Hypoxic Culturing of Human Embryonic Stem Cells Enhances SSEA-3 and MYC Levels

nork Närvä, Elisa, Pursiheimo, Juha-Pekka, Laiho, Asta, Rahkonen, Nelly, Emani, Maheswara Reddy, Viitala, Miro, Laurila, Kirsti, Sahla, Roosa, Lund, Riikka, Lähdesmäki, Harri, Jaakkola, Panu, Lahesmaa, Riitta
Argitaratua 2013

The L1TD1 Protein Interactome Reveals the Importance of Post-transcriptional Regulation in Human Pluripotency

nork Emani, Maheswara Reddy, Närvä, Elisa, Stubb, Aki, Chakroborty, Deepankar, Viitala, Miro, Rokka, Anne, Rahkonen, Nelly, Moulder, Robert, Denessiouk, Konstantin, Trokovic, Ras, Lund, Riikka, Elo, Laura L., Lahesmaa, Riitta
Argitaratua izan da Stem Cell Reports (2015)

Global Chromatin State Analysis Reveals Lineage-Specific Enhancers During the Initiation of Human T helper-1 and T helper-2 Cell Polarisation

nork Hawkins, R. David, Larjo, Antti, Tripathi, Subhash K., Wagner, Ulrich, Luu, Ying, Lönnberg, Tapio, Raghav, Sunil K., Lee, Leonard K., Lund, Riikka, Lähdesmäki, Harri, Ren, Bing, Lahesmaa, Riitta
Argitaratua izan da Immunity (2013)

RNA Polymerase III Subunit POLR3G Regulates Specific Subsets of PolyA(+) and SmallRNA Transcriptomes and Splicing in Human Pluripotent Stem Cells

nork Lund, Riikka J., Rahkonen, Nelly, Malonzo, Maia, Kauko, Leni, Emani, Maheswara Reddy, Kivinen, Virpi, Närvä, Elisa, Kemppainen, Esko, Laiho, Asta, Skottman, Heli, Hovatta, Outi, Rasool, Omid, Nykter, Matti, Lähdesmäki, Harri, Lahesmaa, Riitta
Argitaratua izan da Stem Cell Reports (2017)

Expression profiles of long non-coding RNAs located in autoimmune disease-associated regions reveal immune cell-type specificity

nork Hrdlickova, Barbara, Kumar, Vinod, Kanduri, Kartiek, Zhernakova, Daria V, Tripathi, Subhash, Karjalainen, Juha, Lund, Riikka J, Li, Yang, Ullah, Ubaid, Modderman, Rutger, Abdulahad, Wayel, Lähdesmäki, Harri, Franke, Lude, Lahesmaa, Riitta, Wijmenga, Cisca, Withoff, Sebo
Argitaratua izan da Genome Med (2014)

Epigenetic Silencing of the Key Antioxidant Enzyme Catalase in Karyotypically Abnormal Human Pluripotent Stem Cells

nork Konki, Mikko, Pasumarthy, Kalyan, Malonzo, Maia, Sainio, Annele, Valensisi, Cristina, Söderström, Mirva, Emani, Maheswara Reddy, Stubb, Aki, Närvä, Elisa, Ghimire, Bishwa, Laiho, Asta, Järveläinen, Hannu, Lahesmaa, Riitta, Lähdesmäki, Harri, Hawkins, R. David, Lund, Riikka J.
Argitaratua izan da Sci Rep (2016)

Single cell characterization of B-lymphoid differentiation and leukemic cell states during chemotherapy in ETV6-RUNX1-positive pediatric leukemia identifies drug-targetable transcr...

nork Mehtonen, Juha, Teppo, Susanna, Lahnalampi, Mari, Kokko, Aleksi, Kaukonen, Riina, Oksa, Laura, Bouvy-Liivrand, Maria, Malyukova, Alena, Mäkinen, Artturi, Laukkanen, Saara, Mäkinen, Petri I., Rounioja, Samuli, Ruusuvuori, Pekka, Sangfelt, Olle, Lund, Riikka, Lönnberg, Tapio, Lohi, Olli, Heinäniemi, Merja
Argitaratua izan da Genome Med (2020)