i-cisTarget 2015 update: generalized cis-regulatory enrichment analysis in human, mouse and fly

Yazar: Imrichová, Hana, Hulselmans, Gert, Kalender Atak, Zeynep, Potier, Delphine, Aerts, Stein
Yayımlandı Nucleic Acids Res (2015)

Identification of High-Impact cis-Regulatory Mutations Using Transcription Factor Specific Random Forest Models

Yazar: Svetlichnyy, Dmitry, Imrichova, Hana, Fiers, Mark, Kalender Atak, Zeynep, Aerts, Stein
Yayımlandı PLoS Comput Biol (2015)

Identification of cis-regulatory mutations generating de novo edges in personalized cancer gene regulatory networks

Yazar: Kalender Atak, Zeynep, Imrichova, Hana, Svetlichnyy, Dmitry, Hulselmans, Gert, Christiaens, Valerie, Reumers, Joke, Ceulemans, Hugo, Aerts, Stein
Yayımlandı Genome Med (2017)

Multiplex enhancer-reporter assays uncover unsophisticated TP53 enhancer logic

Yazar: Verfaillie, Annelien, Svetlichnyy, Dmitry, Imrichova, Hana, Davie, Kristofer, Fiers, Mark, Kalender Atak, Zeynep, Hulselmans, Gert, Christiaens, Valerie, Aerts, Stein
Yayımlandı Genome Res (2016)

Functional E3 ligase hotspots and resistance mechanisms to small-molecule degraders

Yazar: Hanzl, Alexander, Casement, Ryan, Imrichova, Hana, Hughes, Scott J., Barone, Eleonora, Testa, Andrea, Bauer, Sophie, Wright, Jane, Brand, Matthias, Ciulli, Alessio, Winter, Georg E.
Yayımlandı Nat Chem Biol (2023)

Breast Cancer Classification Based on Proteotypes Obtained by SWATH Mass Spectrometry

Yazar: Bouchal, Pavel, Schubert, Olga T., Faktor, Jakub, Capkova, Lenka, Imrichova, Hana, Zoufalova, Karolina, Paralova, Vendula, Hrstka, Roman, Liu, Yansheng, Ebhardt, Holger Alexander, Budinska, Eva, Nenutil, Rudolf, Aebersold, Ruedi
Yayımlandı Cell Rep (2019)

Transcription factor MITF and remodeller BRG1 define chromatin organisation at regulatory elements in melanoma cells

Yazar: Laurette, Patrick, Strub, Thomas, Koludrovic, Dana, Keime, Céline, Le Gras, Stéphanie, Seberg, Hannah, Van Otterloo, Eric, Imrichova, Hana, Siddaway, Robert, Aerts, Stein, Cornell, Robert A, Mengus, Gabrielle, Davidson, Irwin
Yayımlandı eLife (2015)

Combined Proteomics and Transcriptomics Identifies Carboxypeptidase B1 and Nuclear Factor κB (NF-κB) Associated Proteins as Putative Biomarkers of Metastasis in Low Grade Breast Ca...

Yazar: Bouchal, Pavel, Dvořáková, Monika, Roumeliotis, Theodoros, Bortlíček, Zbyněk, Ihnatová, Ivana, Procházková, Iva, Ho, Jenny T. C., Maryáš, Josef, Imrichová, Hana, Budinská, Eva, Vyzula, Rostislav, Garbis, Spiros D., Vojtěšek, Bořivoj, Nenutil, Rudolf
Yayımlandı Mol Cell Proteomics (2015)

iRegulon: From a Gene List to a Gene Regulatory Network Using Large Motif and Track Collections

Yazar: Janky, Rekin's, Verfaillie, Annelien, Imrichová, Hana, Van de Sande, Bram, Standaert, Laura, Christiaens, Valerie, Hulselmans, Gert, Herten, Koen, Naval Sanchez, Marina, Potier, Delphine, Svetlichnyy, Dmitry, Kalender Atak, Zeynep, Fiers, Mark, Marine, Jean-Christophe, Aerts, Stein
Baskı/Yayın Bilgisi 2014

The transcription factor Grainyhead primes epithelial enhancers for spatiotemporal activation by displacing nucleosomes

Yazar: Jacobs, Jelle, Atkins, Mardelle, Davie, Kristofer, Imrichova, Hana, Romanelli, Lucia, Christiaens, Valerie, Hulselmans, Gert, Potier, Delphine, Wouters, Jasper, Taskiran, Ibrahim Ihsan, Paciello, Giulia, González-Blas, Carmen Bravo, Koldere, Duygu, Aibar, Sara, Halder, Georg, Aerts, Stein
Yayımlandı Nat Genet (2018)

SCENIC: Single-cell regulatory network inference and clustering

Yazar: Aibar, Sara, González-Blas, Carmen Bravo, Moerman, Thomas, Huynh-Thu, Vân Anh, Imrichova, Hana, Hulselmans, Gert, Rambow, Florian, Marine, Jean-Christophe, Geurts, Pierre, Aerts, Jan, van den Oord, Joost, Atak, Zeynep Kalender, Wouters, Jasper, Aerts, Stein
Yayımlandı Nat Methods (2017)

Decoding the regulatory landscape of melanoma reveals TEADS as regulators of the invasive cell state

Yazar: Verfaillie, Annelien, Imrichova, Hana, Atak, Zeynep Kalender, Dewaele, Michael, Rambow, Florian, Hulselmans, Gert, Christiaens, Valerie, Svetlichnyy, Dmitry, Luciani, Flavie, Van den Mooter, Laura, Claerhout, Sofie, Fiers, Mark, Journe, Fabrice, Ghanem, Ghanem-Elias, Herrmann, Carl, Halder, Georg, Marine, Jean-Christophe, Aerts, Stein
Yayımlandı Nat Commun (2015)

Rational discovery of molecular glue degraders via scalable chemical profiling

Yazar: Mayor-Ruiz, Cristina, Bauer, Sophie, Brand, Matthias, Kozicka, Zuzanna, Siklos, Marton, Imrichova, Hana, Kaltheuner, Ines H., Hahn, Elisa, Seiler, Kristina, Koren, Anna, Petzold, Georg, Fellner, Michaela, Bock, Christoph, Müller, André C., Zuber, Johannes, Geyer, Matthias, Thomä, Nicolas H., Kubicek, Stefan, Winter, Georg E.
Yayımlandı Nat Chem Biol (2020)

Acute BAF perturbation causes immediate changes in chromatin accessibility

Yazar: Schick, Sandra, Grosche, Sarah, Kohl, Katharina Eva, Drpic, Danica, Jaeger, Martin G., Marella, Nara C., Imrichova, Hana, Lin, Jung-Ming G., Hofstätter, Gerald, Schuster, Michael, Rendeiro, André F., Koren, Anna, Petronczki, Mark, Bock, Christoph, Müller, André C., Winter, Georg E., Kubicek, Stefan
Yayımlandı Nat Genet (2021)

Selective Mediator-dependence of cell type-specifying transcription

Yazar: Jaeger, Martin G., Schwalb, Björn, Mackowiak, Sebastian D., Velychko, Taras, Hanzl, Alexander, Imrichova, Hana, Brand, Matthias, Agerer, Benedikt, Chorn, Someth, Nabet, Behnam, Ferguson, Fleur M., Müller, André C., Bergthaler, Andreas, Gray, Nathanael S., Bradner, James E., Bock, Christoph, Hnisz, Denes, Cramer, Patrick, Winter, Georg E.
Yayımlandı Nat Genet (2020)