A comparison of successful and failed protein interface designs highlights the challenges of designing buried hydrogen bonds

por Stranges, P Benjamin, Kuhlman, Brian
Publicado 2013

A Generic Program for Multistate Protein Design

por Leaver-Fay, Andrew, Jacak, Ron, Stranges, P. Benjamin, Kuhlman, Brian
Publicado 2011

Computational design of a symmetric homodimer using β-strand assembly

por Stranges, P. Benjamin, Machius, Mischa, Miley, Michael J., Tripathy, Ashutosh, Kuhlman, Brian
Publicado 2011

CAS9 transcriptional activators for target specificity screening and paired nickases for cooperative genome engineering

por Mali, Prashant, Aach, John, Stranges, P. Benjamin, Esvelt, Kevin M., Moosburner, Mark, Kosuri, Sriram, Yang, Luhan, Church, George M.
Publicado 2013

Physical principles for scalable neural recording

por Marblestone, Adam H., Zamft, Bradley M., Maguire, Yael G., Shapiro, Mikhail G., Cybulski, Thaddeus R., Glaser, Joshua I., Amodei, Dario, Stranges, P. Benjamin, Kalhor, Reza, Dalrymple, David A., Seo, Dongjin, Alon, Elad, Maharbiz, Michel M., Carmena, Jose M., Rabaey, Jan M., Boyden, Edward S., Church, George M., Kording, Konrad P.
Publicado 2013

Design and characterization of a nanopore-coupled polymerase for single-molecule DNA sequencing by synthesis on an electrode array

por Stranges, P. Benjamin, Palla, Mirkó, Kalachikov, Sergey, Nivala, Jeff, Dorwart, Michael, Trans, Andrew, Kumar, Shiv, Porel, Mintu, Chien, Minchen, Tao, Chuanjuan, Morozova, Irina, Li, Zengmin, Shi, Shundi, Aberra, Aman, Arnold, Cleoma, Yang, Alexander, Aguirre, Anne, Harada, Eric T., Korenblum, Daniel, Pollard, James, Bhat, Ashwini, Gremyachinskiy, Dmitriy, Bibillo, Arek, Chen, Roger, Davis, Randy, Russo, James J., Fuller, Carl W., Roever, Stefan, Ju, Jingyue, Church, George M.
Publicado en Proc Natl Acad Sci U S A (2016)

Real-time single-molecule electronic DNA sequencing by synthesis using polymer-tagged nucleotides on a nanopore array

por Fuller, Carl W., Kumar, Shiv, Porel, Mintu, Chien, Minchen, Bibillo, Arek, Stranges, P. Benjamin, Dorwart, Michael, Tao, Chuanjuan, Li, Zengmin, Guo, Wenjing, Shi, Shundi, Korenblum, Daniel, Trans, Andrew, Aguirre, Anne, Liu, Edward, Harada, Eric T., Pollard, James, Bhat, Ashwini, Cech, Cynthia, Yang, Alexander, Arnold, Cleoma, Palla, Mirkó, Hovis, Jennifer, Chen, Roger, Morozova, Irina, Kalachikov, Sergey, Russo, James J., Kasianowicz, John J., Davis, Randy, Roever, Stefan, Church, George M., Ju, Jingyue
Publicado en Proc Natl Acad Sci U S A (2016)

Community-wide assessment of protein-interface modeling suggests improvements to design methodology

por Fleishman, Sarel J, Whitehead, Timothy A, Strauch, Eva-Maria, Corn, Jacob E, Qin, Sanbo, Zhou, Huan-Xiang, Mitchell, Julie C., Demerdash, Omar N.A, Takeda-Shitaka, Mayuko, Terashi, Genki, Moal, Iain H., Li, Xiaofan, Bates, Paul A., Zacharias, Martin, Park, Hahnbeom, Ko, Jun-su, Lee, Hasup, Seok, Chaok, Bourquard, Thomas, Bernauer, Julie, Poupon, Anne, Azé, Jérôme, Soner, Seren, Ovali, Şefik Kerem, Ozbek, Pemra, Ben Tal, Nir, Haliloglu, Türkan, Hwang, Howook, Vreven, Thom, Pierce, Brian G., Weng, Zhiping, Pérez-Cano, Laura, Pons, Carles, Fernández-Recio, Juan, Jiang, Fan, Yang, Feng, Gong, Xinqi, Cao, Libin, Xu, Xianjin, Liu, Bin, Wang, Panwen, Li, Chunhua, Wang, Cunxin, Robert, Charles H., Guharoy, Mainak, Liu, Shiyong, Huang, Yangyu, Li, Lin, Guo, Dachuan, Chen, Ying, Xiao, Yi, London, Nir, Itzhaki, Zohar, Schueler-Furman, Ora, Inbar, Yuval, Patapov, Vladimir, Cohen, Mati, Schreiber, Gideon, Tsuchiya, Yuko, Kanamori, Eiji, Standley, Daron M., Nakamura, Haruki, Kinoshita, Kengo, Driggers, Camden M., Hall, Robert G., Morgan, Jessica L., Hsu, Victor L., Zhan, Jian, Yang, Yuedong, Zhou, Yaoqi, Kastritis, Panagiotis L., Bonvin, Alexandre M.J.J., Zhang, Weiyi, Camacho, Carlos J., Kilambi, Krishna P., Sircar, Aroop, Gray, Jeffrey J., Ohue, Masahito, Uchikoga, Nobuyuki, Matsuzaki, Yuri, Ishida, Takashi, Akiyama, Yutaka, Khashan, Raed, Bush, Stephen, Fouches, Denis, Tropsha, Alexander, Esquivel-Rodríguez, Juan, Kihara, Daisuke, Stranges, P Benjamin, Jacak, Ron, Kuhlman, Brian, Huang, Sheng-You, Zou, Xiaoqin, Wodak, Shoshana J, Janin, Joel, Baker, David
Publicado 2011