Analytical approximation to the accessible surface area of proteins

Por Wodak, Shoshana J., Janin, Joël
Publicado em 1980

Computational Protein Design Is a Challenge for Implicit Solvation Models

Por Jaramillo, Alfonso, Wodak, Shoshana J.
Publicado em 2005

Markov clustering versus affinity propagation for the partitioning of protein interaction graphs

Por Vlasblom, James, Wodak, Shoshana J
Publicado em 2009

Multiple Replica Repulsion Technique for Efficient Conformational Sampling of Biological Systems

Por Malevanets, Anatoly, Wodak, Shoshana J.
Publicado em 2011

The Landscape of Intertwined Associations in Homooligomeric Proteins

Por Wodak, Shoshana J., Malevanets, Anatoly, MacKinnon, Stephen S.
Publicado no Biophys J (2015)

Folding free energy function selects native-like protein sequences in the core but not on the surface

Por Jaramillo, Alfonso, Wernisch, Lorenz, Héry, Stéphanie, Wodak, Shoshana J.
Publicado em 2002

ACLAME: A CLAssification of Mobile genetic Elements

Por Leplae, Raphaël, Hebrant, Aline, Wodak, Shoshana J., Toussaint, Ariane
Publicado em 2004

Relating destabilizing regions to known functional sites in proteins

Por Dessailly, Benoît H, Lensink, Marc F, Wodak, Shoshana J
Publicado em 2007

Metabolic PathFinding: inferring relevant pathways in biochemical networks

Por Croes, Didier, Couche, Fabian, Wodak, Shoshana J., van Helden, Jacques
Publicado em 2005

Transcriptional regulation of protein complexes in yeast

Por Simonis, Nicolas, van Helden, Jacques, Cohen, George N, Wodak, Shoshana J
Publicado em 2004

Up-to-date catalogues of yeast protein complexes

Por Pu, Shuye, Wong, Jessica, Turner, Brian, Cho, Emerson, Wodak, Shoshana J.
Publicado em 2009

Standard atomic volumes in double-stranded DNA and packing in protein–DNA interfaces

Por Nadassy, Katalin, Tomás-Oliveira, Isabel, Alberts, Ian, Janin, Joël, Wodak, Shoshana J.
Publicado em 2001

LigASite—a database of biologically relevant binding sites in proteins with known apo-structures

Por Dessailly, Benoit H., Lensink, Marc F., Orengo, Christine A., Wodak, Shoshana J.
Publicado em 2008

Literature curation of protein interactions: measuring agreement across major public databases

Por Turinsky, Andrei L., Razick, Sabry, Turner, Brian, Donaldson, Ian M., Wodak, Shoshana J.
Publicado em 2010

Topic Pages: PLoS Computational Biology Meets Wikipedia

Por Wodak, Shoshana J., Mietchen, Daniel, Collings, Andrew M., Russell, Robert B., Bourne, Philip E.
Publicado em 2012

The aMAZE LightBench: a web interface to a relational database of cellular processes

Por Lemer, Christian, Antezana, Erick, Couche, Fabian, Fays, Frédéric, Santolaria, Xavier, Janky, Rekin’s, Deville, Yves, Richelle, Jean, Wodak, Shoshana J.
Publicado em 2004

OrthoNets: simultaneous visual analysis of orthologs and their interaction neighborhoods across different organisms

Por Hao, Yanqi, Merkoulovitch, Anna, Vlasblom, James, Pu, Shuye, Turinsky, Andrei L., Roudeva, Denitza, Turner, Brian, Greenblatt, Jack, Wodak, Shoshana J.
Publicado em 2011

Expanding the Landscape of Chromatin Modification (CM)-Related Functional Domains and Genes in Human

Por Pu, Shuye, Turinsky, Andrei L., Vlasblom, James, On, Tuan, Xiong, Xuejian, Emili, Andrew, Zhang, Zhaolei, Greenblatt, Jack, Parkinson, John, Wodak, Shoshana J.
Publicado em 2010

Intercellular network structure and regulatory motifs in the human hematopoietic system

Por Qiao, Wenlian, Wang, Weijia, Laurenti, Elisa, Turinsky, Andrei L, Wodak, Shoshana J, Bader, Gary D, Dick, John E, Zandstra, Peter W
Publicado no Mol Syst Biol (2014)

iRefWeb: interactive analysis of consolidated protein interaction data and their supporting evidence

Por Turner, Brian, Razick, Sabry, Turinsky, Andrei L., Vlasblom, James, Crowdy, Edgard K., Cho, Emerson, Morrison, Kyle, Donaldson, Ian M., Wodak, Shoshana J.
Publicado em 2010