Antibiotic-Induced Alterations of the Murine Gut Microbiota and Subsequent Effects on Colonization Resistance against Clostridium difficile

Bằng Schubert, Alyxandria M., Sinani, Hamide, Schloss, Patrick D.
Xuất bản năm mBio (2015)

Adaptive evolution and inherent tolerance to extreme thermal environments

Bằng Cox, Jennifer, Schubert, Alyxandria M, Travisano, Michael, Putonti, Catherine
Được phát hành 2010

Clearance of Clostridioides difficile Colonization Is Associated with Antibiotic-Specific Bacterial Changes

Bằng Lesniak, Nicholas A., Schubert, Alyxandria M., Sinani, Hamide, Schloss, Patrick D.
Xuất bản năm mSphere (2021)

The Evolution of Molecular Compatibility between Bacteriophage ΦX174 and its Host

Bằng Kula, Alexander, Saelens, Joseph, Cox, Jennifer, Schubert, Alyxandria M., Travisano, Michael, Putonti, Catherine
Xuất bản năm Sci Rep (2018)

Intra- and Interindividual Variations Mask Interspecies Variation in the Microbiota of Sympatric Peromyscus Populations

Bằng Baxter, Nielson T., Wan, Judy J., Schubert, Alyxandria M., Jenior, Matthew L., Myers, Philip, Schloss, Patrick D.
Xuất bản năm Appl Environ Microbiol (2014)

Low Prevalence of Clostridium septicum Fecal Carriage in an Adult Population

Bằng Kopliku, Fatos, Schubert, Alyxandria M., Mogle, Jill, Schloss, Patrick D., Young, Vincent B., Aronoff, David M.
Xuất bản năm Anaerobe (2014)

Stabilization of the murine gut microbiome following weaning

Bằng Schloss, Patrick D., Schubert, Alyxandria M., Zackular, Joseph P., Iverson, Kathryn D., Young, Vincent B., Petrosino, Joseph F.
Được phát hành 2012

Microbiome Data Distinguish Patients with Clostridium difficile Infection and Non-C. difficile-Associated Diarrhea from Healthy Controls

Bằng Schubert, Alyxandria M., Rogers, Mary A. M., Ring, Cathrin, Mogle, Jill, Petrosino, Joseph P., Young, Vincent B., Aronoff, David M., Schloss, Patrick D.
Được phát hành 2014

Bacteriophage Resistance Alters Antibiotic-Mediated Intestinal Expansion of Enterococci

Bằng Chatterjee, Anushila, Johnson, Cydney N., Luong, Phat, Hullahalli, Karthik, McBride, Sara W., Schubert, Alyxandria M., Palmer, Kelli L., Carlson, Paul E., Duerkop, Breck A.
Xuất bản năm Infect Immun (2019)

Intestinal calcium and bile salts facilitate germination of Clostridium difficile spores

Bằng Kochan, Travis J., Somers, Madeline J., Kaiser, Alyssa M., Shoshiev, Michelle S., Hagan, Ada K., Hastie, Jessica L., Giordano, Nicole P., Smith, Ashley D., Schubert, Alyxandria M., Carlson, Paul E., Hanna, Philip C.
Xuất bản năm PLoS Pathog (2017)

Germinant Synergy Facilitates Clostridium difficile Spore Germination under Physiological Conditions

Bằng Kochan, Travis J., Shoshiev, Michelle S., Hastie, Jessica L., Somers, Madeline J., Plotnick, Yael M., Gutierrez-Munoz, Daniela F., Foss, Elissa D., Schubert, Alyxandria M., Smith, Ashley D., Zimmerman, Sally K., Carlson, Paul E., Hanna, Philip C.
Xuất bản năm mSphere (2018)

Metabolic Reconstruction for Metagenomic Data and Its Application to the Human Microbiome

Bằng Abubucker, Sahar, Segata, Nicola, Goll, Johannes, Schubert, Alyxandria M., Izard, Jacques, Cantarel, Brandi L., Rodriguez-Mueller, Beltran, Zucker, Jeremy, Thiagarajan, Mathangi, Henrissat, Bernard, White, Owen, Kelley, Scott T., Methé, Barbara, Schloss, Patrick D., Gevers, Dirk, Mitreva, Makedonka, Huttenhower, Curtis
Được phát hành 2012

Microbial community function and biomarker discovery in the human microbiome

Bằng Segata, Nicola, Abubucker, Sahar, Goll, Johannes, Schubert, Alyxandria M, Izard, Jacques, Cantarel, Brandi L, Rodriguez-Mueller, Beltran, Waldron, Levi, Zucker, Jeremy, Thiagarajan, Mathangi, Henrissat, Bernard, White, Owen, Kelley, Scott T, Methé, Barbara, Schloss, Patrick D, Garrett, Wendy S, Gevers, Dirk, Mitreva, Makedonka, Huttenhower, Curtis
Được phát hành 2011

Microbiota of MR1 deficient mice confer resistance against Clostridium difficile infection

Bằng Smith, Ashley D., Foss, Elissa D., Zhang, Irma, Hastie, Jessica L., Giordano, Nicole P., Gasparyan, Lusine, VinhNguyen, Lam Phuc, Schubert, Alyxandria M., Prasad, Deepika, McMichael, Hannah L., Sun, Jinchun, Beger, Richard D., Simonyan, Vahan, Cowley, Siobhán C., Carlson, Paul E.
Xuất bản năm PLoS One (2019)

A framework for human microbiome research

Bằng Methé, Barbara A., Nelson, Karen E., Pop, Mihai, Creasy, Heather H., Giglio, Michelle G., Huttenhower, Curtis, Gevers, Dirk, Petrosino, Joseph F., Abubucker, Sahar, Badger, Jonathan H., Chinwalla, Asif T., Earl, Ashlee M., FitzGerald, Michael G., Fulton, Robert S., Hallsworth-Pepin, Kymberlie, Lobos, Elizabeth A., Madupu, Ramana, Magrini, Vincent, Martin, John C., Mitreva, Makedonka, Muzny, Donna M., Sodergren, Erica J., Versalovic, James, Wollam, Aye M., Worley, Kim C., Wortman, Jennifer R., Young, Sarah K., Zeng, Qiandong, Aagaard, Kjersti M., Abolude, Olukemi O., Allen-Vercoe, Emma, Alm, Eric J., Alvarado, Lucia, Andersen, Gary L., Anderson, Scott, Appelbaum, Elizabeth, Arachchi, Harindra M., Armitage, Gary, Arze, Cesar A., Ayvaz, Tulin, Baker, Carl C., Begg, Lisa, Belachew, Tsegahiwot, Bhonagiri, Veena, Bihan, Monika, Blaser, Martin J., Bloom, Toby, Vivien Bonazzi, J., Brooks, Paul, Buck, Gregory A., Buhay, Christian J., Busam, Dana A., Campbell, Joseph L., Canon, Shane R., Cantarel, Brandi L., Chain, Patrick S., Chen, I-Min A., Chen, Lei, Chhibba, Shaila, Chu, Ken, Ciulla, Dawn M., Clemente, Jose C., Clifton, Sandra W., Conlan, Sean, Crabtree, Jonathan, Cutting, Mary A., Davidovics, Noam J., Davis, Catherine C., DeSantis, Todd Z., Deal, Carolyn, Delehaunty, Kimberley D., Dewhirst, Floyd E., Deych, Elena, Ding, Yan, Dooling, David J., Dugan, Shannon P., Dunne, Wm. Michael, Durkin, A. Scott, Edgar, Robert C., Erlich, Rachel L., Farmer, Candace N., Farrell, Ruth M., Faust, Karoline, Feldgarden, Michael, Felix, Victor M., Fisher, Sheila, Fodor, Anthony A., Forney, Larry, Foster, Leslie, Di Francesco, Valentina, Friedman, Jonathan, Friedrich, Dennis C., Fronick, Catrina C., Fulton, Lucinda L., Gao, Hongyu, Garcia, Nathalia, Giannoukos, Georgia, Giblin, Christina, Giovanni, Maria Y., Goldberg, Jonathan M., Goll, Johannes, Gonzalez, Antonio, Griggs, Allison, Gujja, Sharvari, Haas, Brian J., Hamilton, Holli A., Harris, Emily L., Hepburn, Theresa A., Herter, Brandi, Hoffmann, Diane E., Holder, Michael E., Howarth, Clinton, Huang, Katherine H., Huse, Susan M., Izard, Jacques, Jansson, Janet K., Jiang, Huaiyang, Jordan, Catherine, Joshi, Vandita, Katancik, James A., Keitel, Wendy A., Kelley, Scott T., Kells, Cristyn, Kinder-Haake, Susan, King, Nicholas B., Knight, Rob, Knights, Dan, Kong, Heidi H., Koren, Omry, Koren, Sergey, Kota, Karthik C., Kovar, Christie L., Kyrpides, Nikos C., La Rosa, Patricio S., Lee, Sandra L., Lemon, Katherine P., Lennon, Niall, Lewis, Cecil M., Lewis, Lora, Ley, Ruth E., Li, Kelvin, Liolios, Konstantinos, Liu, Bo, Liu, Yue, Lo, Chien-Chi, Lozupone, Catherine A., Lunsford, R. Dwayne, Madden, Tessa, Mahurkar, Anup A., Mannon, Peter J., Mardis, Elaine R., Markowitz, Victor M., Mavrommatis, Konstantinos, McCorrison, Jamison M., McDonald, Daniel, McEwen, Jean, McGuire, Amy L., McInnes, Pamela, Mehta, Teena, Mihindukulasuriya, Kathie A., Miller, Jason R., Minx, Patrick J., Newsham, Irene, Nusbaum, Chad, O’Laughlin, Michelle, Orvis, Joshua, Pagani, Ioanna, Palaniappan, Krishna, Patel, Shital M., Pearson, Matthew, Peterson, Jane, Podar, Mircea, Pohl, Craig, Pollard, Katherine S., Priest, Margaret E., Proctor, Lita M., Qin, Xiang, Raes, Jeroen, Ravel, Jacques, Reid, Jeffrey G., Rho, Mina, Rhodes, Rosamond, Riehle, Kevin P., Rivera, Maria C., Rodriguez-Mueller, Beltran, Rogers, Yu-Hui, Ross, Matthew C., Russ, Carsten, Sanka, Ravi K., Pamela Sankar, J., Sathirapongsasuti, Fah, Schloss, Jeffery A., Schloss, Patrick D., Schmidt, Thomas M., Scholz, Matthew, Schriml, Lynn, Schubert, Alyxandria M., Segata, Nicola, Segre, Julia A., Shannon, William D., Sharp, Richard R., Sharpton, Thomas J., Shenoy, Narmada, Sheth, Nihar U., Simone, Gina A., Singh, Indresh, Smillie, Chris S., Sobel, Jack D., Sommer, Daniel D., Spicer, Paul, Sutton, Granger G., Sykes, Sean M., Tabbaa, Diana G., Thiagarajan, Mathangi, Tomlinson, Chad M., Torralba, Manolito, Treangen, Todd J., Truty, Rebecca M., Vishnivetskaya, Tatiana A., Walker, Jason, Wang, Lu, Wang, Zhengyuan, Ward, Doyle V., Warren, Wesley, Watson, Mark A., Wellington, Christopher, Wetterstrand, Kris A., White, James R., Wilczek-Boney, Katarzyna, Wu, Yuan Qing, Wylie, Kristine M., Wylie, Todd, Yandava, Chandri, Ye, Liang, Ye, Yuzhen, Yooseph, Shibu, Youmans, Bonnie P., Zhang, Lan, Zhou, Yanjiao, Zhu, Yiming, Zoloth, Laurie, Zucker, Jeremy D., Birren, Bruce W., Gibbs, Richard A., Highlander, Sarah K., Weinstock, George M., Wilson, Richard K., White, Owen
Được phát hành 2012