Technological considerations for genome-guided diagnosis and management of cancer

Por Lennon, Niall J., Adalsteinsson, Viktor A., Gabriel, Stacey B.
Publicado no Genome Med (2016)

PriSM: a primer selection and matching tool for amplification and sequencing of viral genomes

Por Yu, Qing, Ryan, Elizabeth M., Allen, Todd M., Birren, Bruce W., Henn, Matthew R., Lennon, Niall J.
Publicado em 2011

Accurate Estimation of Fungal Diversity and Abundance through Improved Lineage-Specific Primers Optimized for Illumina Amplicon Sequencing

Por Taylor, D. Lee, Walters, William A., Lennon, Niall J., Bochicchio, James, Krohn, Andrew, Caporaso, J. Gregory, Pennanen, Taina
Publicado no Appl Environ Microbiol (2016)

Closing gaps in the human genome using sequencing by synthesis

Por Garber, Manuel, Zody, Michael C, Arachchi, Harindra M, Berlin, Aaron, Gnerre, Sante, Green, Lisa M, Lennon, Niall, Nusbaum, Chad
Publicado em 2009

Correction: Closing gaps in the human genome using sequencing by synthesis

Por Garber, Manuel, Zody, Michael C, Arachchi, Harindra C, Berlin, Aaron, Gnerre, Sante, Green, Lisa M, Lennon, Niall, Nusbaum, Chad
Publicado em 2011

Characterizing and measuring bias in sequence data

Por Ross, Michael G, Russ, Carsten, Costello, Maura, Hollinger, Andrew, Lennon, Niall J, Hegarty, Ryan, Nusbaum, Chad, Jaffe, David B
Publicado em 2013

LB-11. Comparison of Viral Loads in Individuals With or Without Symptoms At Time of COVID-19 Testing Among 32,480 Residents and Staff of Nursing Homes and Assisted Living Facilitie...

Por Lennon, Niall J, Mina, Michael, Rehm, Heidi L, Hung, Deborah T, Smole, Sandra, Woolley, Ann E, Lander, Eric, Gabriel, Stacey
Publicado no Open Forum Infect Dis (2020)

Estimating epidemiologic dynamics from cross-sectional viral load distributions

Por Hay, James A., Kennedy-Shaffer, Lee, Kanjilal, Sanjat, Lennon, Niall J., Gabriel, Stacey B., Lipsitch, Marc, Mina, Michael J.
Publicado no medRxiv (2021)

Endurance, Refuge, and Reemergence of Dengue Virus Type 2, Puerto Rico, 1986–2007

Por McElroy, Kate L., Santiago, Gilberto A., Lennon, Niall J., Birren, Bruce W., Henn, Matthew R., Muñoz-Jordán, Jorge L.
Publicado em 2011

Reemergence and Decline of Dengue Virus Serotype 3 in Puerto Rico

Por Santiago, Gilberto A., McElroy-Horne, Kate, Lennon, Niall J., Santiago, Luis M., Birren, Bruce W., Henn, Matthew R., Muñoz-Jordán, Jorge L.
Publicado em 2012

Pseudo-temporal ordering of individual cells reveals dynamics and regulators of cell fate decisions

Por Trapnell, Cole, Cacchiarelli, Davide, Grimsby, Jonna, Pokharel, Prapti, Li, Shuqiang, Morse, Michael, Lennon, Niall J., Livak, Kenneth J., Mikkelsen, Tarjei S., Rinn, John L.
Publicado em 2014

A set of reference sequences for the Hepatitis C genotypes 4d, 4f and 4k covering the full open reading frame

Por Kuntzen, Thomas, Berical, Andrew, Ndjomou, Jean, Bennett, Phil, Schneidewind, Arne, Lennon, Niall, Birren, Bruce, Kuiken, Carla, Henn, Matthew R., Simmonds, Peter, Allen, Todd M.
Publicado em 2008

Internally deleted WNV genomes isolated from exotic birds in New Mexico: Function in cells, mosquitoes, and mice

Por PESKO, KENDRA N., FITZPATRICK, KELLY, RYAN, ELIZABETH M., SHI, PEI-YONG, ZHANG, BO, LENNON, NIALL J., NEWMAN, RUCHI M., HENN, MATTHEW R., EBEL, GREGORY D.
Publicado em 2012

DeTiN : Overcoming Tumor in Normal Contamination

Por Taylor-Weiner, Amaro, Stewart, Chip, Giordano, Thomas, Miller, Mendy, Rosenberg, Mara, Macbeth, Alyssa, Lennon, Niall, Rheinbay, Esther, Landau, Dan-Avi, Wu, Catherine J., Getz, Gad
Publicado no Nat Methods (2018)

De novo assembly of highly diverse viral populations

Por Yang, Xiao, Charlebois, Patrick, Gnerre, Sante, Coole, Matthew G, Lennon, Niall J, Levin, Joshua Z, Qu, James, Ryan, Elizabeth M, Zody, Michael C, Henn, Matthew R
Publicado em 2012

Genome-Wide Patterns of Intrahuman Dengue Virus Diversity Reveal Associations with Viral Phylogenetic Clade and Interhost Diversity

Por Parameswaran, Poornima, Charlebois, Patrick, Tellez, Yolanda, Nunez, Andrea, Ryan, Elizabeth M., Malboeuf, Christine M., Levin, Joshua Z., Lennon, Niall J., Balmaseda, Angel, Harris, Eva, Henn, Matthew R.
Publicado em 2012

Next-generation sequencing for HLA typing of class I loci

Por Erlich, Rachel L, Jia, Xiaoming, Anderson, Scott, Banks, Eric, Gao, Xiaojiang, Carrington, Mary, Gupta, Namrata, DePristo, Mark A, Henn, Matthew R, Lennon, Niall J, de Bakker, Paul IW
Publicado em 2011

Endemic Dengue Associated with the Co-Circulation of Multiple Viral Lineages and Localized Density-Dependent Transmission

Por Raghwani, Jayna, Rambaut, Andrew, Holmes, Edward C., Hang, Vu Ty, Hien, Tran Tinh, Farrar, Jeremy, Wills, Bridget, Lennon, Niall J., Birren, Bruce W., Henn, Matthew R., Simmons, Cameron P.
Publicado em 2011

MOLECULAR EVOLUTION OF WEST NILE VIRUS IN A NORTHERN TEMPERATE REGION: CONNECTICUT, USA 1999–2008

Por Armstrong, Philip M., Vossbrinck, Charles R., Andreadis, Theodore G., Anderson, John F., Pesko, Kendra N., Newman, Ruchi M., Lennon, Niall J., Birren, Bruce W., Ebel, Gregory D., Henn, Mathew R.
Publicado em 2011

Dynamics of Dengue Disease Severity Determined by the Interplay Between Viral Genetics and Serotype-Specific Immunity

Por OhAinle, Molly, Balmaseda, Angel, Macalalad, Alexander R., Tellez, Yolanda, Zody, Michael C., Saborío, Saira, Nuñez, Andrea, Lennon, Niall J., Birren, Bruce W., Gordon, Aubree, Henn, Matthew R., Harris, Eva
Publicado no Sci Transl Med (2011)