How deep is deep enough for RNA-Seq profiling of bacterial transcriptomes?

Por Haas, Brian J, Chin, Melissa, Nusbaum, Chad, Birren, Bruce W, Livny, Jonathan
Publicado em 2012

Patterns of Intron Gain and Loss in Fungi

Por Nielsen, Cydney B, Friedman, Brad, Birren, Bruce, Burge, Christopher B, Galagan, James E
Publicado em 2004

Draft Genome Sequence of the Cellulolytic Fungus Chaetomium globosum

Por Cuomo, Christina A., Untereiner, Wendy A., Ma, Li-Jun, Grabherr, Manfred, Birren, Bruce W.
Publicado no Genome Announc (2015)

Gene-targeted metagenomic analysis of glucan-branching enzyme gene profiles among human and animal fecal microbiota

Por Lee, Sunghee, Cantarel, Brandi, Henrissat, Bernard, Gevers, Dirk, Birren, Bruce W, Huttenhower, Curtis, Ko, GwangPyo
Publicado em 2014

Whole Genome Amplification and De novo Assembly of Single Bacterial Cells

Por Rodrigue, Sébastien, Malmstrom, Rex R., Berlin, Aaron M., Birren, Bruce W., Henn, Matthew R., Chisholm, Sallie W.
Publicado em 2009

PriSM: a primer selection and matching tool for amplification and sequencing of viral genomes

Por Yu, Qing, Ryan, Elizabeth M., Allen, Todd M., Birren, Bruce W., Henn, Matthew R., Lennon, Niall J.
Publicado em 2011

16S rRNA Gene Survey of Microbial Communities in Winogradsky Columns

Por Rundell, Ethan A., Banta, Lois M., Ward, Doyle V., Watts, Corey D., Birren, Bruce, Esteban, David J.
Publicado em 2014

Structure and Evolution of the Smith-Magenis Syndrome Repeat Gene Clusters, SMS-REPs

Por Park, Sung-Sup, Stankiewicz, Paweł, Bi, Weimin, Shaw, Christine, Lehoczky, Jessica, Dewar, Ken, Birren, Bruce, Lupski, James R.
Publicado em 2002

Mouse Molecular Cytogenetic Resource: 157 BACs Link the Chromosomal and Genetic Maps

Por Korenberg, Julie R., Chen, Xiao-Ning, Devon, Keri L., Noya, David, Oster-Granite, Mary L., Birren, Bruce W.
Publicado em 1999

Perfect Conserved Linkage Across the Entire Mouse Chromosome 10 Region Homologous to Human Chromosome 21

Por Wiltshire, Tim, Pletcher, Mathew, Cole, Susan E., Villanueva, Melissa, Birren, Bruce, Lehoczky, Jessica, Dewar, Ken, Reeves, Roger H.
Publicado em 1999

Mapping of Myxococcus xanthus Social Motility dsp Mutations to the dif Genes

Por Lancero, Hope, Brofft, Jennifer E., Downard, John, Birren, Bruce W., Nusbaum, Chad, Naylor, Jerome, Shi, Wenyuan, Shimkets, Lawrence J.
Publicado em 2002

Endurance, Refuge, and Reemergence of Dengue Virus Type 2, Puerto Rico, 1986–2007

Por McElroy, Kate L., Santiago, Gilberto A., Lennon, Niall J., Birren, Bruce W., Henn, Matthew R., Muñoz-Jordán, Jorge L.
Publicado em 2011

The 1.4-Mb CMT1A Duplication/HNPP Deletion Genomic Region Reveals Unique Genome Architectural Features and Provides Insights into the Recent Evolution of New Genes

Por Inoue, Ken, Dewar, Ken, Katsanis, Nicholas, Reiter, Lawrence T., Lander, Eric S., Devon, Keri L., Wyman, Dudley W., Lupski, James R., Birren, Bruce
Publicado em 2001

Genome Sequence of the Pathogenic Fungus Sporothrix schenckii (ATCC 58251)

Por Cuomo, Christina A., Rodriguez-Del Valle, Nuri, Perez-Sanchez, Lizaida, Abouelleil, Amr, Goldberg, Jonathan, Young, Sarah, Zeng, Qiandong, Birren, Bruce W.
Publicado em 2014

Evaluation of bacterial ribosomal RNA (rRNA) depletion methods for sequencing microbial community transcriptomes

Por Ciulla, Dawn, Giannoukos, Georgia, Earl, Ashlee, Feldgarden, Michael, Gevers, Dirk, Levin, Joshua, Livny, Jonathan, Ward, Doyle, Gnirke, Andreas, Nusbaum, Chad, Birren, Bruce
Publicado em 2010

Populations of latent Mycobacterium tuberculosis lack a cell wall: Isolation, visualization, and whole-genome characterization

Por Velayati, Ali Akbar, Abeel, Thomas, Shea, Terrance, Zhavnerko, Gennady Konstantinovich, Birren, Bruce, Cassell, Gail H., Earl, Ashlee M., Hoffner, Sven, Farnia, Parissa
Publicado no Int J Mycobacteriol (2015)

Extensive global movement of multidrug-resistant M. tuberculosis strains revealed by whole-genome analysis

Por Cohen, Keira A, Manson, Abigail L, Abeel, Thomas, Desjardins, Christopher A, Chapman, Sinead B, Hoffner, Sven, Birren, Bruce W, Earl, Ashlee M
Publicado no Thorax (2019)

Reemergence and Decline of Dengue Virus Serotype 3 in Puerto Rico

Por Santiago, Gilberto A., McElroy-Horne, Kate, Lennon, Niall J., Santiago, Luis M., Birren, Bruce W., Henn, Matthew R., Muñoz-Jordán, Jorge L.
Publicado em 2012

The Role of Selection in Shaping Diversity of Natural M. tuberculosis Populations

Por Pepperell, Caitlin S., Casto, Amanda M., Kitchen, Andrew, Granka, Julie M., Cornejo, Omar E., Holmes, Eddie C., Birren, Bruce, Galagan, James, Feldman, Marcus W.
Publicado em 2013

Correction: The Role of Selection in Shaping Diversity of Natural M. tuberculosis Populations

Por Pepperell, Caitlin S., Casto, Amanda M., Kitchen, Andrew, Granka, Julie M., Cornejo, Omar E., Holmes, Edward C., Birren, Bruce, Galagan, James, Feldman, Marcus W.
Publicado em 2013