PPI layouts: BioJS components for the display of Protein-Protein Interactions

di Salazar, Gustavo A., Meintjes, Ayton, Mulder, Nicola
Pubblicazione 2014

DAS Writeback: A Collaborative Annotation System

di Salazar, Gustavo A, Jimenez, Rafael C, Garcia, Alexander, Hermjakob, Henning, Mulder, Nicola, Blake, Edwin
Pubblicazione 2011

myKaryoView: A Light-Weight Client for Visualization of Genomic Data

di Jimenez, Rafael C., Salazar, Gustavo A., Gel, Bernat, Dopazo, Joaquin, Mulder, Nicola, Corpas, Manuel
Pubblicazione 2011

A web-based protein interaction network visualizer

di Salazar, Gustavo A, Meintjes, Ayton, Mazandu, Gaston K, Rapanoël, Holifidy A, Akinola, Richard O, Mulder, Nicola J
Pubblicazione 2014

Dasty3, a WEB framework for DAS

di Villaveces, Jose M., Jimenez, Rafael C., Garcia, Leyla J., Salazar, Gustavo A., Gel, Bernat, Mulder, Nicola, Martin, Maria, Garcia, Alexander, Hermjakob, Henning
Pubblicazione 2011

Genome properties in 2019: a new companion database to InterPro for the inference of complete functional attributes

di Richardson, Lorna J, Rawlings, Neil D, Salazar, Gustavo A, Almeida, Alexandre, Haft, David R, Ducq, Gregory, Sutton, Granger G, Finn, Robert D
Pubblicato in Nucleic Acids Res (2019)

MyDas, an Extensible Java DAS Server

di Salazar, Gustavo A., García, Leyla J., Jones, Philip, Jimenez, Rafael C., Quinn, Antony F., Jenkinson, Andrew M., Mulder, Nicola, Martin, Maria, Hunter, Sarah, Hermjakob, Henning
Pubblicazione 2012

Platelet proteome reveals novel pathways of platelet activation and platelet-mediated immunoregulation in dengue

di Trugilho, Monique Ramos de Oliveira, Hottz, Eugenio Damaceno, Brunoro, Giselle Villa Flor, Teixeira-Ferreira, André, Carvalho, Paulo Costa, Salazar, Gustavo Adolfo, Zimmerman, Guy A., Bozza, Fernando A., Bozza, Patrícia T., Perales, Jonas
Pubblicato in PLoS Pathog (2017)

Pfam: The protein families database in 2021

di Mistry, Jaina, Chuguransky, Sara, Williams, Lowri, Qureshi, Matloob, Salazar, Gustavo A, Sonnhammer, Erik L L, Tosatto, Silvio C E, Paladin, Lisanna, Raj, Shriya, Richardson, Lorna J, Finn, Robert D, Bateman, Alex
Pubblicato in Nucleic Acids Res (2020)

The Pfam protein families database: towards a more sustainable future

di Finn, Robert D., Coggill, Penelope, Eberhardt, Ruth Y., Eddy, Sean R., Mistry, Jaina, Mitchell, Alex L., Potter, Simon C., Punta, Marco, Qureshi, Matloob, Sangrador-Vegas, Amaia, Salazar, Gustavo A., Tate, John, Bateman, Alex
Pubblicato in Nucleic Acids Res (2016)

BioJS: an open source JavaScript framework for biological data visualization

di Gómez, John, García, Leyla J., Salazar, Gustavo A., Villaveces, Jose, Gore, Swanand, García, Alexander, Martín, Maria J., Launay, Guillaume, Alcántara, Rafael, del-Toro, Noemi, Dumousseau, Marine, Orchard, Sandra, Velankar, Sameer, Hermjakob, Henning, Zong, Chenggong, Ping, Peipei, Corpas, Manuel, Jiménez, Rafael C.
Pubblicazione 2013

EBI Metagenomics in 2017: enriching the analysis of microbial communities, from sequence reads to assemblies

di Mitchell, Alex L, Scheremetjew, Maxim, Denise, Hubert, Potter, Simon, Tarkowska, Aleksandra, Qureshi, Matloob, Salazar, Gustavo A, Pesseat, Sebastien, Boland, Miguel A, Hunter, Fiona M I, ten Hoopen, Petra, Alako, Blaise, Amid, Clara, Wilkinson, Darren J, Curtis, Thomas P, Cochrane, Guy, Finn, Robert D
Pubblicato in Nucleic Acids Res (2018)

The Pfam protein families database in 2019

di El-Gebali, Sara, Mistry, Jaina, Bateman, Alex, Eddy, Sean R, Luciani, Aurélien, Potter, Simon C, Qureshi, Matloob, Richardson, Lorna J, Salazar, Gustavo A, Smart, Alfredo, Sonnhammer, Erik L L, Hirsh, Layla, Paladin, Lisanna, Piovesan, Damiano, Tosatto, Silvio C E, Finn, Robert D
Pubblicato in Nucleic Acids Res (2019)

BioJS: an open source standard for biological visualisation – its status in 2014

di Corpas, Manuel, Jimenez, Rafael, Carbon, Seth J, García, Alex, Garcia, Leyla, Goldberg, Tatyana, Gomez, John, Kalderimis, Alexis, Lewis, Suzanna E, Mulvany, Ian, Pawlik, Aleksandra, Rowland, Francis, Salazar, Gustavo, Schreiber, Fabian, Sillitoe, Ian, Spooner, William H, Thanki, Anil S., Villaveces, José M, Yachdav, Guy, Hermjakob, Henning
Pubblicazione 2014

Genome3D: integrating a collaborative data pipeline to expand the depth and breadth of consensus protein structure annotation

di Sillitoe, Ian, Andreeva, Antonina, Blundell, Tom L, Buchan, Daniel W A, Finn, Robert D, Gough, Julian, Jones, David, Kelley, Lawrence A, Paysan-Lafosse, Typhaine, Lam, Su Datt, Murzin, Alexey G, Pandurangan, Arun Prasad, Salazar, Gustavo A, Skwark, Marcin J, Sternberg, Michael J E, Velankar, Sameer, Orengo, Christine
Pubblicato in Nucleic Acids Res (2020)

The InterPro protein families and domains database: 20 years on

di Blum, Matthias, Chang, Hsin-Yu, Chuguransky, Sara, Grego, Tiago, Kandasaamy, Swaathi, Mitchell, Alex, Nuka, Gift, Paysan-Lafosse, Typhaine, Qureshi, Matloob, Raj, Shriya, Richardson, Lorna, Salazar, Gustavo A, Williams, Lowri, Bork, Peer, Bridge, Alan, Gough, Julian, Haft, Daniel H, Letunic, Ivica, Marchler-Bauer, Aron, Mi, Huaiyu, Natale, Darren A, Necci, Marco, Orengo, Christine A, Pandurangan, Arun P, Rivoire, Catherine, Sigrist, Christian J A, Sillitoe, Ian, Thanki, Narmada, Thomas, Paul D, Tosatto, Silvio C E, Wu, Cathy H, Bateman, Alex, Finn, Robert D
Pubblicato in Nucleic Acids Res (2020)

iAnn: an event sharing platform for the life sciences

di Jimenez, Rafael C., Albar, Juan P., Bhak, Jong, Blatter, Marie-Claude, Blicher, Thomas, Brazas, Michelle D., Brooksbank, Cath, Budd, Aidan, De Las Rivas, Javier, Dreyer, Jacqueline, van Driel, Marc A., Dunn, Michael J., Fernandes, Pedro L., van Gelder, Celia W. G., Hermjakob, Henning, Ioannidis, Vassilios, Judge, David P., Kahlem, Pascal, Korpelainen, Eija, Kraus, Hans-Joachim, Loveland, Jane, Mayer, Christine, McDowall, Jennifer, Moran, Federico, Mulder, Nicola, Nyronen, Tommi, Rother, Kristian, Salazar, Gustavo A., Schneider, Reinhard, Via, Allegra, Villaveces, Jose M., Yu, Ping, Schneider, Maria V., Attwood, Teresa K., Corpas, Manuel
Pubblicazione 2013

InterPro in 2019: improving coverage, classification and access to protein sequence annotations

di Mitchell, Alex L, Attwood, Teresa K, Babbitt, Patricia C, Blum, Matthias, Bork, Peer, Bridge, Alan, Brown, Shoshana D, Chang, Hsin-Yu, El-Gebali, Sara, Fraser, Matthew I, Gough, Julian, Haft, David R, Huang, Hongzhan, Letunic, Ivica, Lopez, Rodrigo, Luciani, Aurélien, Madeira, Fabio, Marchler-Bauer, Aron, Mi, Huaiyu, Natale, Darren A, Necci, Marco, Nuka, Gift, Orengo, Christine, Pandurangan, Arun P, Paysan-Lafosse, Typhaine, Pesseat, Sebastien, Potter, Simon C, Qureshi, Matloob A, Rawlings, Neil D, Redaschi, Nicole, Richardson, Lorna J, Rivoire, Catherine, Salazar, Gustavo A, Sangrador-Vegas, Amaia, Sigrist, Christian J A, Sillitoe, Ian, Sutton, Granger G, Thanki, Narmada, Thomas, Paul D, Tosatto, Silvio C E, Yong, Siew-Yit, Finn, Robert D
Pubblicato in Nucleic Acids Res (2019)