Protein subfamily assignment using the Conserved Domain Database

מאת Marchler-Bauer Aron, Fong Jessica H
יצא לאור 2008-11-01

CD-Search: protein domain annotations on the fly

מאת Marchler-Bauer, Aron, Bryant, Stephen H.
יצא לאור 2004

Protein subfamily assignment using the Conserved Domain Database

מאת Fong, Jessica H, Marchler-Bauer, Aron
יצא לאור 2008

CORAL: aligning conserved core regions across domain families

מאת Fong, Jessica H., Marchler-Bauer, Aron
יצא לאור 2009

Automated hierarchical classification of protein domain subfamilies based on functionally-divergent residue signatures

מאת Neuwald, Andrew F, Lanczycki, Christopher J, Marchler-Bauer, Aron
יצא לאור 2012

AlexSys: a knowledge-based expert system for multiple sequence alignment construction and analysis

מאת Aniba, Mohamed Radhouene, Poch, Olivier, Marchler-Bauer, Aron, Thompson, Julie Dawn
יצא לאור 2010

Automatic annotation of experimentally derived, evolutionarily conserved post-translational modifications onto multiple genomes

מאת Sridhara, Viswanadham, Marchler-Bauer, Aron, Bryant, Stephen H., Geer, Lewis Y.
יצא לאור 2011

NCBI's Conserved Domain Database and Tools for Protein Domain Analysis

מאת Yang, Mingzhang, Derbyshire, Myra K., Yamashita, Roxanne A., Marchler‐Bauer, Aron
הוצא לאור ב Curr Protoc Bioinformatics (2019)

Annotation of functional sites with the Conserved Domain Database

מאת Derbyshire, Myra K., Lanczycki, Christopher J., Bryant, Stephen H., Marchler-Bauer, Aron
יצא לאור 2012

Obtaining extremely large and accurate protein multiple sequence alignments from curated hierarchical alignments

מאת Neuwald, Andrew F, Lanczycki, Christopher J, Hodges, Theresa K, Marchler-Bauer, Aron
הוצא לאור ב Database (Oxford) (2020)

cddApp: a Cytoscape app for accessing the NCBI conserved domain database

מאת Morris, John H., Wu, Allan, Yamashita, Roxanne A., Marchler-Bauer, Aron, Ferrin, Thomas E.
הוצא לאור ב Bioinformatics (2015)

MMDB: 3D structure data in Entrez

מאת Wang, Yanli, Addess, Kenneth J., Geer, Lewis, Madej, Thomas, Marchler-Bauer, Aron, Zimmerman, Diane, Bryant, Stephen H.
יצא לאור 2000

Knowledge-based expert systems and a proof-of-concept case study for multiple sequence alignment construction and analysis

מאת Aniba, Mohamed Radhouene, Siguenza, Sophie, Friedrich, Anne, Plewniak, Frédéric, Poch, Olivier, Marchler-Bauer, Aron, Thompson, Julie Dawn
יצא לאור 2009

CDD: a database of conserved domain alignments with links to domain three-dimensional structure

מאת Marchler-Bauer, Aron, Panchenko, Anna R., Shoemaker, Benjamin A., Thiessen, Paul A., Geer, Lewis Y., Bryant, Stephen H.
יצא לאור 2002

Improving the consistency of domain annotation within the Conserved Domain Database

מאת Derbyshire, Myra K., Gonzales, Noreen R., Lu, Shennan, He, Jane, Marchler, Gabriele H., Wang, Zhouxi, Marchler-Bauer, Aron
הוצא לאור ב Database (Oxford) (2015)

MMDB and VAST+: tracking structural similarities between macromolecular complexes

מאת Madej, Thomas, Lanczycki, Christopher J., Zhang, Dachuan, Thiessen, Paul A., Geer, Renata C., Marchler-Bauer, Aron, Bryant, Stephen H.
יצא לאור 2014

PubMed Text Similarity Model and its application to curation efforts in the Conserved Domain Database

מאת Islamaj, Rezarta, Wilbur, W John, Xie, Natalie, Gonzales, Noreen R, Thanki, Narmada, Yamashita, Roxanne, Zheng, Chanjuan, Marchler-Bauer, Aron, Lu, Zhiyong
הוצא לאור ב Database (Oxford) (2019)

The NCBI BioSystems database

מאת Geer, Lewis Y., Marchler-Bauer, Aron, Geer, Renata C., Han, Lianyi, He, Jane, He, Siqian, Liu, Chunlei, Shi, Wenyao, Bryant, Stephen H.
יצא לאור 2010

Inferred Biomolecular Interaction Server—a web server to analyze and predict protein interacting partners and binding sites

מאת Shoemaker, Benjamin A., Zhang, Dachuan, Thangudu, Ratna R., Tyagi, Manoj, Fong, Jessica H., Marchler-Bauer, Aron, Bryant, Stephen H., Madej, Thomas, Panchenko, Anna R.
יצא לאור 2010

IBIS (Inferred Biomolecular Interaction Server) reports, predicts and integrates multiple types of conserved interactions for proteins

מאת Shoemaker, Benjamin A., Zhang, Dachuan, Tyagi, Manoj, Thangudu, Ratna R., Fong, Jessica H., Marchler-Bauer, Aron, Bryant, Stephen H., Madej, Thomas, Panchenko, Anna R.
יצא לאור 2012